RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
TULP4-206ENST00000616856 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
TULP4-206ENST00000616856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
TULP4-206ENST00000616856 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
TULP4-206ENST00000616856 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
TULP4-206ENST00000616856 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
TULP4-206ENST00000616856 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.59
TULP4-206ENST00000616856 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
TULP4-206ENST00000616856 FBLN2P98095 1184 aa18.73■□□□□ 0.59
TULP4-206ENST00000616856 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
TULP4-206ENST00000616856 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
TULP4-206ENST00000616856 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
TULP4-206ENST00000616856 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
TULP4-206ENST00000616856 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
TULP4-206ENST00000616856 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
TULP4-206ENST00000616856 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
TULP4-206ENST00000616856 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
TULP4-206ENST00000616856 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
TULP4-206ENST00000616856 APLP2Q06481 763 aa18.62■□□□□ 0.57
TULP4-206ENST00000616856 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
TULP4-206ENST00000616856 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
TULP4-206ENST00000616856 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
TULP4-206ENST00000616856 NUP160Q12769 1436 aa18.55■□□□□ 0.56
TULP4-206ENST00000616856 CHD1O14646 1710 aa18.54■□□□□ 0.56
TULP4-206ENST00000616856 PCF11O94913 1555 aaKnown RBP18.53■□□□□ 0.56
TULP4-206ENST00000616856 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
TULP4-206ENST00000616856 UGGT2Q9NYU1 1516 aa18.52■□□□□ 0.56
TULP4-206ENST00000616856 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
TULP4-206ENST00000616856 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
TULP4-206ENST00000616856 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
TULP4-206ENST00000616856 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
TULP4-206ENST00000616856 KIAA0556O60303 1618 aa18.46■□□□□ 0.55
TULP4-206ENST00000616856 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
TULP4-206ENST00000616856 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
TULP4-206ENST00000616856 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
TULP4-206ENST00000616856 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
TULP4-206ENST00000616856 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
TULP4-206ENST00000616856 CARMIL2Q6F5E8 1435 aa18.38■□□□□ 0.53
TULP4-206ENST00000616856 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
TULP4-206ENST00000616856 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
TULP4-206ENST00000616856 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
TULP4-206ENST00000616856 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
TULP4-206ENST00000616856 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
TULP4-206ENST00000616856 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
TULP4-206ENST00000616856 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
TULP4-206ENST00000616856 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
TULP4-206ENST00000616856 RAPGEF6Q8TEU7 1601 aa18.27■□□□□ 0.52
TULP4-206ENST00000616856 PLB1Q6P1J6 1458 aa18.27■□□□□ 0.52
TULP4-206ENST00000616856 EPRSP07814 1512 aaKnown RBP18.27■□□□□ 0.51
TULP4-206ENST00000616856 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
TULP4-206ENST00000616856 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
TULP4-206ENST00000616856 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
TULP4-206ENST00000616856 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
TULP4-206ENST00000616856 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
TULP4-206ENST00000616856 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
TULP4-206ENST00000616856 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
TULP4-206ENST00000616856 PTPRGP23470 1445 aa18.21■□□□□ 0.51
TULP4-206ENST00000616856 MYT1Q01538 1121 aa18.21■□□□□ 0.51
TULP4-206ENST00000616856 PHLDB1Q86UU1 1377 aa18.2■□□□□ 0.5
TULP4-206ENST00000616856 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
TULP4-206ENST00000616856 EHBP1L1Q8N3D4 1523 aa18.18■□□□□ 0.5
TULP4-206ENST00000616856 ABCA8O94911 1581 aa18.17■□□□□ 0.5
TULP4-206ENST00000616856 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
TULP4-206ENST00000616856 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
TULP4-206ENST00000616856 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
TULP4-206ENST00000616856 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.5
TULP4-206ENST00000616856 SUPT6HQ7KZ85 1726 aaKnown RBP18.14■□□□□ 0.49
TULP4-206ENST00000616856 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
TULP4-206ENST00000616856 ITGAEP38570 1179 aa18.11■□□□□ 0.49
TULP4-206ENST00000616856 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
TULP4-206ENST00000616856 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
TULP4-206ENST00000616856 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
TULP4-206ENST00000616856 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
TULP4-206ENST00000616856 ATP10BO94823 1461 aa18.08■□□□□ 0.48
TULP4-206ENST00000616856 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
TULP4-206ENST00000616856 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
TULP4-206ENST00000616856 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
TULP4-206ENST00000616856 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
TULP4-206ENST00000616856 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
TULP4-206ENST00000616856 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
TULP4-206ENST00000616856 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
TULP4-206ENST00000616856 KIF14Q15058 1648 aa18■□□□□ 0.47
TULP4-206ENST00000616856 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
TULP4-206ENST00000616856 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
TULP4-206ENST00000616856 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
TULP4-206ENST00000616856 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
TULP4-206ENST00000616856 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
TULP4-206ENST00000616856 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.47
TULP4-206ENST00000616856 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
TULP4-206ENST00000616856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
TULP4-206ENST00000616856 ZCCHC11Q5TAX3 1644 aaKnown RBP17.93■□□□□ 0.46
TULP4-206ENST00000616856 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
TULP4-206ENST00000616856 MIER1Q8N108 512 aa17.91■□□□□ 0.46
TULP4-206ENST00000616856 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
TULP4-206ENST00000616856 MAPKBP1O60336 1514 aa17.9■□□□□ 0.46
TULP4-206ENST00000616856 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.46
TULP4-206ENST00000616856 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.45
TULP4-206ENST00000616856 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
TULP4-206ENST00000616856 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
TULP4-206ENST00000616856 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms