RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
GEN1-208ENST00000614478 CLIP1P30622 1438 aa27.96■■■□□ 2.07
GEN1-208ENST00000614478 NUP160Q12769 1436 aa27.91■■■□□ 2.06
GEN1-208ENST00000614478 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
GEN1-208ENST00000614478 RANGAP1P46060 587 aaPredicted RBP27.89■■■□□ 2.05
GEN1-208ENST00000614478 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
GEN1-208ENST00000614478 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
GEN1-208ENST00000614478 KIAA0586Q9BVV6 1533 aa27.76■■■□□ 2.03
GEN1-208ENST00000614478 PCGF6Q9BYE7 350 aa27.71■■■□□ 2.03
GEN1-208ENST00000614478 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.03
GEN1-208ENST00000614478 IQGAP2Q13576 1575 aa27.69■■■□□ 2.02
GEN1-208ENST00000614478 SHROOM2Q13796 1616 aa27.69■■■□□ 2.02
GEN1-208ENST00000614478 TRIM26Q12899 539 aaPredicted RBP27.68■■■□□ 2.02
GEN1-208ENST00000614478 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
GEN1-208ENST00000614478 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
GEN1-208ENST00000614478 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
GEN1-208ENST00000614478 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
GEN1-208ENST00000614478 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
GEN1-208ENST00000614478 ARHGEF11O15085 1522 aa27.56■■■□□ 2
GEN1-208ENST00000614478 UGGT2Q9NYU1 1516 aa27.54■■■□□ 2
GEN1-208ENST00000614478 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
GEN1-208ENST00000614478 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
GEN1-208ENST00000614478 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
GEN1-208ENST00000614478 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
GEN1-208ENST00000614478 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
GEN1-208ENST00000614478 APLP2Q06481 763 aa27.47■■□□□ 1.99
GEN1-208ENST00000614478 EFCAB5A4FU69 1503 aa27.47■■□□□ 1.99
GEN1-208ENST00000614478 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.98
GEN1-208ENST00000614478 P3H3Q8IVL6 736 aa27.44■■□□□ 1.98
GEN1-208ENST00000614478 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
GEN1-208ENST00000614478 DISP1Q96F81 1524 aa27.43■■□□□ 1.98
GEN1-208ENST00000614478 KIAA0556O60303 1618 aa27.42■■□□□ 1.98
GEN1-208ENST00000614478 SAMD9Q5K651 1589 aa27.4■■□□□ 1.98
GEN1-208ENST00000614478 FHOD3Q2V2M9 1422 aa27.39■■□□□ 1.98
GEN1-208ENST00000614478 FMN1Q68DA7 1419 aa27.25■■□□□ 1.95
GEN1-208ENST00000614478 PTPRGP23470 1445 aa27.25■■□□□ 1.95
GEN1-208ENST00000614478 PCF11O94913 1555 aaKnown RBP27.24■■□□□ 1.95
GEN1-208ENST00000614478 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
GEN1-208ENST00000614478 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
GEN1-208ENST00000614478 CASKIN1Q8WXD9 1431 aa27.2■■□□□ 1.95
GEN1-208ENST00000614478 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
GEN1-208ENST00000614478 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
GEN1-208ENST00000614478 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
GEN1-208ENST00000614478 TIAM1Q13009 1591 aa27.17■■□□□ 1.94
GEN1-208ENST00000614478 HRCP23327 699 aa27.13■■□□□ 1.93
GEN1-208ENST00000614478 CFAP43Q8NDM7 1665 aa27.09■■□□□ 1.93
GEN1-208ENST00000614478 UACAQ9BZF9 1416 aa27.09■■□□□ 1.93
GEN1-208ENST00000614478 ADCY10Q96PN6 1610 aa27.08■■□□□ 1.93
GEN1-208ENST00000614478 ABCA8O94911 1581 aa27.08■■□□□ 1.93
GEN1-208ENST00000614478 PLB1Q6P1J6 1458 aa27.07■■□□□ 1.92
GEN1-208ENST00000614478 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
GEN1-208ENST00000614478 ABCC2Q92887 1545 aa27.06■■□□□ 1.92
GEN1-208ENST00000614478 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
GEN1-208ENST00000614478 RAPGEF6Q8TEU7 1601 aa27.05■■□□□ 1.92
GEN1-208ENST00000614478 LRRIQ1Q96JM4 1722 aa27■■□□□ 1.91
GEN1-208ENST00000614478 HECW1Q76N89 1606 aa26.95■■□□□ 1.91
GEN1-208ENST00000614478 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
GEN1-208ENST00000614478 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
GEN1-208ENST00000614478 CCDC18Q5T9S5 1454 aa26.9■■□□□ 1.9
GEN1-208ENST00000614478 ZCCHC11Q5TAX3 1644 aaKnown RBP26.9■■□□□ 1.9
GEN1-208ENST00000614478 NPM1P06748 294 aaKnown RBP eCLIP26.9■■□□□ 1.9
GEN1-208ENST00000614478 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
GEN1-208ENST00000614478 EPRSP07814 1512 aaKnown RBP26.87■■□□□ 1.89
GEN1-208ENST00000614478 MTUS2Q5JR59 1369 aa26.85■■□□□ 1.89
GEN1-208ENST00000614478 MAPKBP1O60336 1514 aa26.83■■□□□ 1.89
GEN1-208ENST00000614478 ATP10BO94823 1461 aa26.83■■□□□ 1.89
GEN1-208ENST00000614478 HNRNPUL2Q1KMD3 747 aaKnown RBP26.83■■□□□ 1.88
GEN1-208ENST00000614478 PHLDB1Q86UU1 1377 aa26.82■■□□□ 1.88
GEN1-208ENST00000614478 CCNB3Q8WWL7 1395 aa26.81■■□□□ 1.88
GEN1-208ENST00000614478 CDK13Q14004 1512 aaKnown RBP26.81■■□□□ 1.88
GEN1-208ENST00000614478 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
GEN1-208ENST00000614478 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
GEN1-208ENST00000614478 MAGI3Q5TCQ9 1506 aa26.77■■□□□ 1.88
GEN1-208ENST00000614478 ASXL2Q76L83 1435 aa26.74■■□□□ 1.87
GEN1-208ENST00000614478 ZEB1P37275 1124 aaPredicted RBP26.74■■□□□ 1.87
GEN1-208ENST00000614478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.73■■□□□ 1.87
GEN1-208ENST00000614478 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
GEN1-208ENST00000614478 NCOA2Q15596 1464 aa26.7■■□□□ 1.87
GEN1-208ENST00000614478 WDR7Q9Y4E6 1490 aa26.69■■□□□ 1.86
GEN1-208ENST00000614478 CDK11AQ9UQ88 783 aaPredicted RBP26.65■■□□□ 1.86
GEN1-208ENST00000614478 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.85
GEN1-208ENST00000614478 KIF13AQ9H1H9 1805 aa26.63■■□□□ 1.85
GEN1-208ENST00000614478 ABCC10Q5T3U5 1492 aa26.63■■□□□ 1.85
GEN1-208ENST00000614478 DIP2BQ9P265 1576 aa26.62■■□□□ 1.85
GEN1-208ENST00000614478 FAM50AQ14320 339 aaKnown RBP26.62■■□□□ 1.85
GEN1-208ENST00000614478 FGD6Q6ZV73 1430 aa26.61■■□□□ 1.85
GEN1-208ENST00000614478 MYOM3Q5VTT5 1437 aa26.6■■□□□ 1.85
GEN1-208ENST00000614478 ITGAEP38570 1179 aa26.59■■□□□ 1.85
GEN1-208ENST00000614478 CCER1Q8TC90 406 aaPredicted RBP26.59■■□□□ 1.85
GEN1-208ENST00000614478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.57■■□□□ 1.84
GEN1-208ENST00000614478 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
GEN1-208ENST00000614478 GLI2P10070 1586 aa26.56■■□□□ 1.84
GEN1-208ENST00000614478 KCNH8Q96L42 1107 aa26.53■■□□□ 1.84
GEN1-208ENST00000614478 TRHP20396 242 aaPredicted RBP26.52■■□□□ 1.84
GEN1-208ENST00000614478 FAM69CQ0P6D2 419 aa26.51■■□□□ 1.83
GEN1-208ENST00000614478 KIF14Q15058 1648 aa26.51■■□□□ 1.83
GEN1-208ENST00000614478 ABCA9Q8IUA7 1624 aa26.5■■□□□ 1.83
GEN1-208ENST00000614478 MAP3K4Q9Y6R4 1608 aa26.47■■□□□ 1.83
GEN1-208ENST00000614478 PTPN23Q9H3S7 1636 aa26.47■■□□□ 1.83
GEN1-208ENST00000614478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms