RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 JPH4Q96JJ6 628 aa13.77□□□□□ -0.21
PSMB3-208ENST00000613870 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
PSMB3-208ENST00000613870 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
PSMB3-208ENST00000613870 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
PSMB3-208ENST00000613870 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
PSMB3-208ENST00000613870 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
PSMB3-208ENST00000613870 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
PSMB3-208ENST00000613870 EEA1Q15075 1411 aa13.67□□□□□ -0.22
PSMB3-208ENST00000613870 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
PSMB3-208ENST00000613870 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
PSMB3-208ENST00000613870 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
PSMB3-208ENST00000613870 IQGAP2Q13576 1575 aa13.6□□□□□ -0.23
PSMB3-208ENST00000613870 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
PSMB3-208ENST00000613870 PTPRGP23470 1445 aa13.56□□□□□ -0.24
PSMB3-208ENST00000613870 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
PSMB3-208ENST00000613870 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
PSMB3-208ENST00000613870 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
PSMB3-208ENST00000613870 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
PSMB3-208ENST00000613870 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
PSMB3-208ENST00000613870 TNIKQ9UKE5 1360 aa13.54□□□□□ -0.24
PSMB3-208ENST00000613870 PRXQ9BXM0 1461 aa13.54□□□□□ -0.24
PSMB3-208ENST00000613870 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
PSMB3-208ENST00000613870 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
PSMB3-208ENST00000613870 CTTNBP2Q8WZ74 1663 aa13.51□□□□□ -0.25
PSMB3-208ENST00000613870 MAPKBP1O60336 1514 aa13.51□□□□□ -0.25
PSMB3-208ENST00000613870 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
PSMB3-208ENST00000613870 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
PSMB3-208ENST00000613870 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
PSMB3-208ENST00000613870 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
PSMB3-208ENST00000613870 DIP2BQ9P265 1576 aa13.46□□□□□ -0.25
PSMB3-208ENST00000613870 ABCC2Q92887 1545 aa13.46□□□□□ -0.25
PSMB3-208ENST00000613870 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
PSMB3-208ENST00000613870 KIF21BO75037 1637 aa13.46□□□□□ -0.26
PSMB3-208ENST00000613870 UHRF1BP1LA0JNW5 1464 aa13.45□□□□□ -0.26
PSMB3-208ENST00000613870 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
PSMB3-208ENST00000613870 KDM5BQ9UGL1 1544 aa13.4□□□□□ -0.26
PSMB3-208ENST00000613870 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
PSMB3-208ENST00000613870 TSPOAP1O95153 1857 aa13.39□□□□□ -0.27
PSMB3-208ENST00000613870 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
PSMB3-208ENST00000613870 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
PSMB3-208ENST00000613870 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
PSMB3-208ENST00000613870 ABCA8O94911 1581 aa13.35□□□□□ -0.27
PSMB3-208ENST00000613870 GLI2P10070 1586 aa13.34□□□□□ -0.27
PSMB3-208ENST00000613870 SAMD9Q5K651 1589 aa13.33□□□□□ -0.28
PSMB3-208ENST00000613870 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
PSMB3-208ENST00000613870 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
PSMB3-208ENST00000613870 PPRC1Q5VV67 1664 aaKnown RBP13.31□□□□□ -0.28
PSMB3-208ENST00000613870 KDM6BO15054 1643 aa13.29□□□□□ -0.28
PSMB3-208ENST00000613870 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
PSMB3-208ENST00000613870 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
PSMB3-208ENST00000613870 CLIP1P30622 1438 aa13.28□□□□□ -0.28
PSMB3-208ENST00000613870 ATP10BO94823 1461 aa13.25□□□□□ -0.29
PSMB3-208ENST00000613870 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
PSMB3-208ENST00000613870 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
PSMB3-208ENST00000613870 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
PSMB3-208ENST00000613870 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
PSMB3-208ENST00000613870 COL17A1Q9UMD9 1497 aaPredicted RBP13.22□□□□□ -0.29
PSMB3-208ENST00000613870 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
PSMB3-208ENST00000613870 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
PSMB3-208ENST00000613870 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
PSMB3-208ENST00000613870 CD109Q6YHK3 1445 aa13.2□□□□□ -0.3
PSMB3-208ENST00000613870 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
PSMB3-208ENST00000613870 NUP153P49790 1475 aaKnown RBP13.19□□□□□ -0.3
PSMB3-208ENST00000613870 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
PSMB3-208ENST00000613870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
PSMB3-208ENST00000613870 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
PSMB3-208ENST00000613870 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
PSMB3-208ENST00000613870 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
PSMB3-208ENST00000613870 ABCA9Q8IUA7 1624 aa13.13□□□□□ -0.31
PSMB3-208ENST00000613870 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
PSMB3-208ENST00000613870 APLP2Q06481 763 aa13.13□□□□□ -0.31
PSMB3-208ENST00000613870 PLEKHD1A6NEE1 506 aa13.1□□□□□ -0.31
PSMB3-208ENST00000613870 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
PSMB3-208ENST00000613870 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.31
PSMB3-208ENST00000613870 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
PSMB3-208ENST00000613870 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
PSMB3-208ENST00000613870 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
PSMB3-208ENST00000613870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.328e-7■■■■■ 66.5
PSMB3-208ENST00000613870 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
PSMB3-208ENST00000613870 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
PSMB3-208ENST00000613870 NEO1Q92859 1461 aa13.04□□□□□ -0.32
PSMB3-208ENST00000613870 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
PSMB3-208ENST00000613870 ADGRL1O94910 1474 aa13.03□□□□□ -0.32
PSMB3-208ENST00000613870 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
PSMB3-208ENST00000613870 RAPGEF3O95398 923 aa13.02□□□□□ -0.33
PSMB3-208ENST00000613870 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
PSMB3-208ENST00000613870 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
PSMB3-208ENST00000613870 CDK11AQ9UQ88 783 aaPredicted RBP12.98□□□□□ -0.33
PSMB3-208ENST00000613870 FANCAO15360 1455 aa12.97□□□□□ -0.33
PSMB3-208ENST00000613870 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
PSMB3-208ENST00000613870 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
PSMB3-208ENST00000613870 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
PSMB3-208ENST00000613870 PLCH2O75038 1416 aa12.96□□□□□ -0.33
PSMB3-208ENST00000613870 KIF14Q15058 1648 aa12.96□□□□□ -0.33
PSMB3-208ENST00000613870 RICTORQ6R327 1708 aa12.96□□□□□ -0.34
PSMB3-208ENST00000613870 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.34
PSMB3-208ENST00000613870 CFAP74Q9C0B2 1584 aa12.95□□□□□ -0.34
PSMB3-208ENST00000613870 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
PSMB3-208ENST00000613870 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
PSMB3-208ENST00000613870 CCDC18Q5T9S5 1454 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms