RNA–Protein interactions for RNA: ENST00000613146.4

ACACA-228, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 3,974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-228ENST00000613146 PRDM2Q13029 1718 aa11.4□□□□□ -0.59
ACACA-228ENST00000613146 CHMP7Q8WUX9 453 aaPredicted RBP11.4□□□□□ -0.59
ACACA-228ENST00000613146 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
ACACA-228ENST00000613146 ABCA10Q8WWZ4 1543 aa11.37□□□□□ -0.59
ACACA-228ENST00000613146 CHIC2Q9UKJ5 165 aa11.34□□□□□ -0.59
ACACA-228ENST00000613146 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
ACACA-228ENST00000613146 NEUROD1Q13562 356 aa11.31□□□□□ -0.6
ACACA-228ENST00000613146 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
ACACA-228ENST00000613146 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
ACACA-228ENST00000613146 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
ACACA-228ENST00000613146 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
ACACA-228ENST00000613146 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
ACACA-228ENST00000613146 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
ACACA-228ENST00000613146 SIN3AQ96ST3 1273 aa11.24□□□□□ -0.61
ACACA-228ENST00000613146 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
ACACA-228ENST00000613146 PCF11O94913 1555 aaKnown RBP11.22□□□□□ -0.61
ACACA-228ENST00000613146 HIRIP3Q9BW71 556 aaPredicted RBP11.22□□□□□ -0.61
ACACA-228ENST00000613146 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
ACACA-228ENST00000613146 JPH4Q96JJ6 628 aa11.21□□□□□ -0.62
ACACA-228ENST00000613146 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.62
ACACA-228ENST00000613146 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
ACACA-228ENST00000613146 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
ACACA-228ENST00000613146 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
ACACA-228ENST00000613146 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
ACACA-228ENST00000613146 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
ACACA-228ENST00000613146 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
ACACA-228ENST00000613146 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
ACACA-228ENST00000613146 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
ACACA-228ENST00000613146 CUL7Q14999 1698 aa11.16□□□□□ -0.62
ACACA-228ENST00000613146 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
ACACA-228ENST00000613146 FMN1Q68DA7 1419 aa11.15□□□□□ -0.62
ACACA-228ENST00000613146 FOXD1Q16676 465 aa11.15□□□□□ -0.62
ACACA-228ENST00000613146 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
ACACA-228ENST00000613146 KCNH8Q96L42 1107 aa11.15□□□□□ -0.63
ACACA-228ENST00000613146 CDK13Q14004 1512 aaKnown RBP11.15□□□□□ -0.63
ACACA-228ENST00000613146 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
ACACA-228ENST00000613146 PBRM1Q86U86 1689 aa11.13□□□□□ -0.63
ACACA-228ENST00000613146 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
ACACA-228ENST00000613146 CASKIN1Q8WXD9 1431 aa11.13□□□□□ -0.63
ACACA-228ENST00000613146 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
ACACA-228ENST00000613146 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
ACACA-228ENST00000613146 WDR62O43379 1518 aa11.12□□□□□ -0.63
ACACA-228ENST00000613146 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
ACACA-228ENST00000613146 GRIN2AQ12879 1464 aa11.1□□□□□ -0.63
ACACA-228ENST00000613146 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
ACACA-228ENST00000613146 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
ACACA-228ENST00000613146 ADAMTS12P58397 1594 aa11.09□□□□□ -0.63
ACACA-228ENST00000613146 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
ACACA-228ENST00000613146 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
ACACA-228ENST00000613146 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
ACACA-228ENST00000613146 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
ACACA-228ENST00000613146 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
ACACA-228ENST00000613146 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
ACACA-228ENST00000613146 MIER1Q8N108 512 aa11.06□□□□□ -0.64
ACACA-228ENST00000613146 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
ACACA-228ENST00000613146 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
ACACA-228ENST00000613146 CNGB1Q14028 1251 aaPredicted RBP11.05□□□□□ -0.64
ACACA-228ENST00000613146 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
ACACA-228ENST00000613146 FGD6Q6ZV73 1430 aa11.05□□□□□ -0.64
ACACA-228ENST00000613146 PLEKHD1A6NEE1 506 aa11.04□□□□□ -0.64
ACACA-228ENST00000613146 MAGI3Q5TCQ9 1506 aa11.04□□□□□ -0.64
ACACA-228ENST00000613146 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
ACACA-228ENST00000613146 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
ACACA-228ENST00000613146 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
ACACA-228ENST00000613146 DISP1Q96F81 1524 aa11.02□□□□□ -0.65
ACACA-228ENST00000613146 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■■□ 25.1
ACACA-228ENST00000613146 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
ACACA-228ENST00000613146 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
ACACA-228ENST00000613146 ZNF326Q5BKZ1 582 aaKnown RBP11.01□□□□□ -0.65
ACACA-228ENST00000613146 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
ACACA-228ENST00000613146 SAMD9Q5K651 1589 aa11□□□□□ -0.65
ACACA-228ENST00000613146 MYOM3Q5VTT5 1437 aa10.99□□□□□ -0.65
ACACA-228ENST00000613146 CARMIL2Q6F5E8 1435 aa10.99□□□□□ -0.65
ACACA-228ENST00000613146 PTPRGP23470 1445 aa10.98□□□□□ -0.65
ACACA-228ENST00000613146 MAGI1Q96QZ7 1491 aaPredicted RBP10.98□□□□□ -0.65
ACACA-228ENST00000613146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.658e-12■■□□□ 13.3
ACACA-228ENST00000613146 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
ACACA-228ENST00000613146 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
ACACA-228ENST00000613146 CFAP43Q8NDM7 1665 aa10.96□□□□□ -0.66
ACACA-228ENST00000613146 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
ACACA-228ENST00000613146 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
ACACA-228ENST00000613146 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
ACACA-228ENST00000613146 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
ACACA-228ENST00000613146 UGGT2Q9NYU1 1516 aa10.93□□□□□ -0.66
ACACA-228ENST00000613146 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
ACACA-228ENST00000613146 ERCC6L2Q5T890 1561 aa10.92□□□□□ -0.66
ACACA-228ENST00000613146 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
ACACA-228ENST00000613146 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
ACACA-228ENST00000613146 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
ACACA-228ENST00000613146 SUPT6HQ7KZ85 1726 aaKnown RBP10.91□□□□□ -0.66
ACACA-228ENST00000613146 NAIPQ13075 1403 aa10.9□□□□□ -0.66
ACACA-228ENST00000613146 TSPY4P0CV99 314 aa10.9□□□□□ -0.66
ACACA-228ENST00000613146 TSPY10P0CW01 314 aa10.9□□□□□ -0.66
ACACA-228ENST00000613146 SENP3Q9H4L4 574 aaPredicted RBP10.9□□□□□ -0.66
ACACA-228ENST00000613146 PTPN23Q9H3S7 1636 aa10.9□□□□□ -0.66
ACACA-228ENST00000613146 NUP160Q12769 1436 aa10.9□□□□□ -0.66
ACACA-228ENST00000613146 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.67
ACACA-228ENST00000613146 EHBP1L1Q8N3D4 1523 aa10.9□□□□□ -0.67
ACACA-228ENST00000613146 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
ACACA-228ENST00000613146 MAPKBP1O60336 1514 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms