RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
LSP1-217ENST00000612798 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
LSP1-217ENST00000612798 ARHGAP35Q9NRY4 1499 aa27.12■■□□□ 1.93
LSP1-217ENST00000612798 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
LSP1-217ENST00000612798 P3H3Q8IVL6 736 aa27.1■■□□□ 1.93
LSP1-217ENST00000612798 CHD1O14646 1710 aa27.1■■□□□ 1.93
LSP1-217ENST00000612798 ARAP1Q96P48 1450 aa27.08■■□□□ 1.93
LSP1-217ENST00000612798 IQGAP2Q13576 1575 aa27.05■■□□□ 1.92
LSP1-217ENST00000612798 NUP160Q12769 1436 aa27.04■■□□□ 1.92
LSP1-217ENST00000612798 KIAA0586Q9BVV6 1533 aa27.03■■□□□ 1.92
LSP1-217ENST00000612798 FHOD3Q2V2M9 1422 aa26.97■■□□□ 1.91
LSP1-217ENST00000612798 VPS8Q8N3P4 1428 aa26.97■■□□□ 1.91
LSP1-217ENST00000612798 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
LSP1-217ENST00000612798 SAMD9Q5K651 1589 aa26.93■■□□□ 1.9
LSP1-217ENST00000612798 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
LSP1-217ENST00000612798 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
LSP1-217ENST00000612798 JPH4Q96JJ6 628 aa26.89■■□□□ 1.89
LSP1-217ENST00000612798 DISP1Q96F81 1524 aa26.84■■□□□ 1.89
LSP1-217ENST00000612798 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
LSP1-217ENST00000612798 KIAA0556O60303 1618 aa26.79■■□□□ 1.88
LSP1-217ENST00000612798 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
LSP1-217ENST00000612798 ATP1B4Q9UN42 357 aaPredicted RBP26.74■■□□□ 1.87
LSP1-217ENST00000612798 PCF11O94913 1555 aaKnown RBP26.74■■□□□ 1.87
LSP1-217ENST00000612798 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
LSP1-217ENST00000612798 FMN1Q68DA7 1419 aa26.72■■□□□ 1.87
LSP1-217ENST00000612798 APLP2Q06481 763 aa26.7■■□□□ 1.86
LSP1-217ENST00000612798 SHROOM2Q13796 1616 aa26.69■■□□□ 1.86
LSP1-217ENST00000612798 CARMIL2Q6F5E8 1435 aa26.69■■□□□ 1.86
LSP1-217ENST00000612798 OSCARQ8IYS5 282 aa26.68■■□□□ 1.86
LSP1-217ENST00000612798 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
LSP1-217ENST00000612798 CASKIN1Q8WXD9 1431 aa26.65■■□□□ 1.86
LSP1-217ENST00000612798 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
LSP1-217ENST00000612798 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
LSP1-217ENST00000612798 ARID3CA6NKF2 412 aa26.56■■□□□ 1.84
LSP1-217ENST00000612798 LRRIQ1Q96JM4 1722 aa26.56■■□□□ 1.84
LSP1-217ENST00000612798 PLB1Q6P1J6 1458 aa26.54■■□□□ 1.84
LSP1-217ENST00000612798 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
LSP1-217ENST00000612798 PTPRGP23470 1445 aa26.52■■□□□ 1.84
LSP1-217ENST00000612798 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
LSP1-217ENST00000612798 HECW1Q76N89 1606 aa26.48■■□□□ 1.83
LSP1-217ENST00000612798 CFAP43Q8NDM7 1665 aa26.48■■□□□ 1.83
LSP1-217ENST00000612798 MAP3K1Q13233 1512 aa26.48■■□□□ 1.83
LSP1-217ENST00000612798 PCGF6Q9BYE7 350 aa26.47■■□□□ 1.83
LSP1-217ENST00000612798 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
LSP1-217ENST00000612798 NUP153P49790 1475 aaKnown RBP26.45■■□□□ 1.82
LSP1-217ENST00000612798 CDK13Q14004 1512 aaKnown RBP26.45■■□□□ 1.82
LSP1-217ENST00000612798 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
LSP1-217ENST00000612798 LRRC9Q6ZRR7 1453 aa26.43■■□□□ 1.82
LSP1-217ENST00000612798 ABCA8O94911 1581 aa26.43■■□□□ 1.82
LSP1-217ENST00000612798 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
LSP1-217ENST00000612798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
LSP1-217ENST00000612798 HNRNPUL2Q1KMD3 747 aaKnown RBP26.36■■□□□ 1.81
LSP1-217ENST00000612798 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
LSP1-217ENST00000612798 UACAQ9BZF9 1416 aa26.34■■□□□ 1.81
LSP1-217ENST00000612798 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.8
LSP1-217ENST00000612798 ATP10BO94823 1461 aa26.29■■□□□ 1.8
LSP1-217ENST00000612798 ABCC2Q92887 1545 aa26.25■■□□□ 1.79
LSP1-217ENST00000612798 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
LSP1-217ENST00000612798 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
LSP1-217ENST00000612798 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
LSP1-217ENST00000612798 CDK11AQ9UQ88 783 aaPredicted RBP26.18■■□□□ 1.78
LSP1-217ENST00000612798 UHRF1BP1LA0JNW5 1464 aa26.17■■□□□ 1.78
LSP1-217ENST00000612798 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
LSP1-217ENST00000612798 ADCY10Q96PN6 1610 aa26.17■■□□□ 1.78
LSP1-217ENST00000612798 SUPT6HQ7KZ85 1726 aaKnown RBP26.16■■□□□ 1.78
LSP1-217ENST00000612798 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.77
LSP1-217ENST00000612798 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.77
LSP1-217ENST00000612798 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.77
LSP1-217ENST00000612798 PLEKHD1A6NEE1 506 aa26.13■■□□□ 1.77
LSP1-217ENST00000612798 TROQ12816 1431 aaPredicted RBP26.13■■□□□ 1.77
LSP1-217ENST00000612798 ZCCHC11Q5TAX3 1644 aaKnown RBP26.11■■□□□ 1.77
LSP1-217ENST00000612798 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
LSP1-217ENST00000612798 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
LSP1-217ENST00000612798 KIF14Q15058 1648 aa26.08■■□□□ 1.77
LSP1-217ENST00000612798 CYB5RLQ6IPT4 315 aa26.07■■□□□ 1.76
LSP1-217ENST00000612798 CCNB3Q8WWL7 1395 aa26.07■■□□□ 1.76
LSP1-217ENST00000612798 MYOM3Q5VTT5 1437 aa26.03■■□□□ 1.76
LSP1-217ENST00000612798 FAM50AQ14320 339 aaKnown RBP26.02■■□□□ 1.76
LSP1-217ENST00000612798 FGD6Q6ZV73 1430 aa26■■□□□ 1.75
LSP1-217ENST00000612798 KCNH8Q96L42 1107 aa26■■□□□ 1.75
LSP1-217ENST00000612798 ITGAEP38570 1179 aa25.98■■□□□ 1.75
LSP1-217ENST00000612798 ABCC10Q5T3U5 1492 aa25.95■■□□□ 1.74
LSP1-217ENST00000612798 NPM1P06748 294 aaKnown RBP eCLIP25.94■■□□□ 1.74
LSP1-217ENST00000612798 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
LSP1-217ENST00000612798 PTPN23Q9H3S7 1636 aa25.9■■□□□ 1.74
LSP1-217ENST00000612798 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
LSP1-217ENST00000612798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.88■■□□□ 1.73
LSP1-217ENST00000612798 ZNF644Q9H582 1327 aaPredicted RBP25.88■■□□□ 1.73
LSP1-217ENST00000612798 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
LSP1-217ENST00000612798 TTC37Q6PGP7 1564 aa25.87■■□□□ 1.73
LSP1-217ENST00000612798 CDC42BPAQ5VT25 1732 aa25.86■■□□□ 1.73
LSP1-217ENST00000612798 MIA2Q96PC5 1412 aa25.86■■□□□ 1.73
LSP1-217ENST00000612798 CFDP1Q9UEE9 299 aaPredicted RBP25.85■■□□□ 1.73
LSP1-217ENST00000612798 ZNF777Q9ULD5 760 aaPredicted RBP25.83■■□□□ 1.73
LSP1-217ENST00000612798 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
LSP1-217ENST00000612798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.83■■□□□ 1.73
LSP1-217ENST00000612798 ITSN2Q9NZM3 1697 aa25.82■■□□□ 1.72
LSP1-217ENST00000612798 PTPRKQ15262 1439 aa25.77■■□□□ 1.72
LSP1-217ENST00000612798 CDC42BPBQ9Y5S2 1711 aa25.77■■□□□ 1.72
LSP1-217ENST00000612798 CAMSAP2Q08AD1 1489 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms