RNA–Protein interactions for RNA: ENST00000612642.4

AMD1-207, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 4,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-207ENST00000612642 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
AMD1-207ENST00000612642 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
AMD1-207ENST00000612642 CHIC2Q9UKJ5 165 aa9.88□□□□□ -0.83
AMD1-207ENST00000612642 SETD5Q9C0A6 1442 aa9.88□□□□□ -0.83
AMD1-207ENST00000612642 HNRNPUQ00839 825 aaKnown RBP eCLIP9.86□□□□□ -0.83
AMD1-207ENST00000612642 MIER1Q8N108 512 aa9.86□□□□□ -0.83
AMD1-207ENST00000612642 BCANQ96GW7 911 aa9.85□□□□□ -0.83
AMD1-207ENST00000612642 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
AMD1-207ENST00000612642 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
AMD1-207ENST00000612642 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
AMD1-207ENST00000612642 ANP32AP39687 249 aaKnown RBP9.84□□□□□ -0.83
AMD1-207ENST00000612642 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
AMD1-207ENST00000612642 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
AMD1-207ENST00000612642 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
AMD1-207ENST00000612642 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
AMD1-207ENST00000612642 FKBP8Q14318 412 aa9.83□□□□□ -0.84
AMD1-207ENST00000612642 CDCA8Q53HL2 280 aa9.83□□□□□ -0.84
AMD1-207ENST00000612642 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
AMD1-207ENST00000612642 RRP7BPQ9NSQ0 103 aa9.82□□□□□ -0.84
AMD1-207ENST00000612642 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
AMD1-207ENST00000612642 MRS2Q9HD23 443 aa9.81□□□□□ -0.84
AMD1-207ENST00000612642 KIF21BO75037 1637 aa9.79□□□□□ -0.84
AMD1-207ENST00000612642 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
AMD1-207ENST00000612642 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
AMD1-207ENST00000612642 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
AMD1-207ENST00000612642 ERICH3Q5RHP9 1530 aa9.78□□□□□ -0.84
AMD1-207ENST00000612642 FAM9BQ8IZU0 186 aa9.77□□□□□ -0.85
AMD1-207ENST00000612642 SCAF1Q9H7N4 1312 aaKnown RBP9.77□□□□□ -0.85
AMD1-207ENST00000612642 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
AMD1-207ENST00000612642 WDR43Q15061 677 aaKnown RBP eCLIP9.76□□□□□ -0.85
AMD1-207ENST00000612642 HMGXB3Q12766 1538 aa9.76□□□□□ -0.85
AMD1-207ENST00000612642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
AMD1-207ENST00000612642 CCDC18Q5T9S5 1454 aa9.74□□□□□ -0.85
AMD1-207ENST00000612642 RAB3GAP2Q9H2M9 1393 aa9.73□□□□□ -0.85
AMD1-207ENST00000612642 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
AMD1-207ENST00000612642 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
AMD1-207ENST00000612642 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
AMD1-207ENST00000612642 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
AMD1-207ENST00000612642 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
AMD1-207ENST00000612642 KDM2AQ9Y2K7 1162 aa9.71□□□□□ -0.85
AMD1-207ENST00000612642 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.86
AMD1-207ENST00000612642 CFTRP13569 1480 aa9.7□□□□□ -0.86
AMD1-207ENST00000612642 KANK1Q14678 1352 aa9.7□□□□□ -0.86
AMD1-207ENST00000612642 ANKRD30AQ9BXX3 1397 aa9.7□□□□□ -0.86
AMD1-207ENST00000612642 ERICH6BQ5W0A0 696 aa9.7□□□□□ -0.86
AMD1-207ENST00000612642 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
AMD1-207ENST00000612642 TDRD9Q8NDG6 1382 aaKnown RBP9.69□□□□□ -0.86
AMD1-207ENST00000612642 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
AMD1-207ENST00000612642 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
AMD1-207ENST00000612642 CUX1P39880 1505 aa9.68□□□□□ -0.86
AMD1-207ENST00000612642 IGF1RP08069 1367 aa9.68□□□□□ -0.86
AMD1-207ENST00000612642 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
AMD1-207ENST00000612642 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
AMD1-207ENST00000612642 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
AMD1-207ENST00000612642 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
AMD1-207ENST00000612642 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
AMD1-207ENST00000612642 KNSTRNQ9Y448 316 aa9.66□□□□□ -0.86
AMD1-207ENST00000612642 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
AMD1-207ENST00000612642 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
AMD1-207ENST00000612642 PPP1R15AO75807 674 aaPredicted RBP9.65□□□□□ -0.86
AMD1-207ENST00000612642 EFCAB5A4FU69 1503 aa9.64□□□□□ -0.87
AMD1-207ENST00000612642 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
AMD1-207ENST00000612642 GAPVD1Q14C86 1478 aa9.64□□□□□ -0.87
AMD1-207ENST00000612642 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
AMD1-207ENST00000612642 TMF1P82094 1093 aa9.63□□□□□ -0.87
AMD1-207ENST00000612642 PPP4R2Q9NY27 417 aa9.63□□□□□ -0.87
AMD1-207ENST00000612642 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
AMD1-207ENST00000612642 DDRGK1Q96HY6 314 aa9.63□□□□□ -0.87
AMD1-207ENST00000612642 PRXQ9BXM0 1461 aa9.62□□□□□ -0.87
AMD1-207ENST00000612642 CASKIN1Q8WXD9 1431 aa9.62□□□□□ -0.87
AMD1-207ENST00000612642 SYNJ1O43426 1573 aa9.62□□□□□ -0.87
AMD1-207ENST00000612642 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
AMD1-207ENST00000612642 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
AMD1-207ENST00000612642 ARID4BQ4LE39 1312 aaPredicted RBP9.6□□□□□ -0.87
AMD1-207ENST00000612642 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
AMD1-207ENST00000612642 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
AMD1-207ENST00000612642 RRBP1Q9P2E9 1410 aaKnown RBP9.59□□□□□ -0.87
AMD1-207ENST00000612642 RALBP1Q15311 655 aa9.59□□□□□ -0.87
AMD1-207ENST00000612642 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
AMD1-207ENST00000612642 RGL3Q3MIN7 710 aa9.59□□□□□ -0.87
AMD1-207ENST00000612642 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
AMD1-207ENST00000612642 MS4A1P11836 297 aa9.58□□□□□ -0.88
AMD1-207ENST00000612642 PKD2Q13563 968 aa9.58□□□□□ -0.88
AMD1-207ENST00000612642 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
AMD1-207ENST00000612642 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
AMD1-207ENST00000612642 NUDCQ9Y266 331 aa9.57□□□□□ -0.88
AMD1-207ENST00000612642 NUP155O75694 1391 aa9.57□□□□□ -0.88
AMD1-207ENST00000612642 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
AMD1-207ENST00000612642 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
AMD1-207ENST00000612642 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
AMD1-207ENST00000612642 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
AMD1-207ENST00000612642 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
AMD1-207ENST00000612642 MYH16Q9H6N6 1097 aa9.56□□□□□ -0.88
AMD1-207ENST00000612642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.56□□□□□ -0.88
AMD1-207ENST00000612642 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
AMD1-207ENST00000612642 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
AMD1-207ENST00000612642 HDGFP51858 240 aaKnown RBP9.55□□□□□ -0.88
AMD1-207ENST00000612642 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
AMD1-207ENST00000612642 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
AMD1-207ENST00000612642 PHLDB1Q86UU1 1377 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms