RNA–Protein interactions for RNA: ENST00000611589.4

NRXN1-220, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-220ENST00000611589 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
NRXN1-220ENST00000611589 TIAM1Q13009 1591 aa27.33■■□□□ 1.96
NRXN1-220ENST00000611589 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
NRXN1-220ENST00000611589 CFAP43Q8NDM7 1665 aa27.29■■□□□ 1.96
NRXN1-220ENST00000611589 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
NRXN1-220ENST00000611589 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.96
NRXN1-220ENST00000611589 SAMD9Q5K651 1589 aa27.28■■□□□ 1.96
NRXN1-220ENST00000611589 GRIN2BQ13224 1484 aa27.28■■□□□ 1.96
NRXN1-220ENST00000611589 PCF11O94913 1555 aaKnown RBP27.27■■□□□ 1.96
NRXN1-220ENST00000611589 ERCC6Q03468 1493 aa27.26■■□□□ 1.95
NRXN1-220ENST00000611589 FYCO1Q9BQS8 1478 aa27.24■■□□□ 1.95
NRXN1-220ENST00000611589 KANK4Q5T7N3 995 aaPredicted RBP27.23■■□□□ 1.95
NRXN1-220ENST00000611589 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
NRXN1-220ENST00000611589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.23■■□□□ 1.95
NRXN1-220ENST00000611589 RRBP1Q9P2E9 1410 aaKnown RBP27.22■■□□□ 1.95
NRXN1-220ENST00000611589 FHOD3Q2V2M9 1422 aa27.2■■□□□ 1.95
NRXN1-220ENST00000611589 FMN1Q68DA7 1419 aa27.19■■□□□ 1.94
NRXN1-220ENST00000611589 CASKIN1Q8WXD9 1431 aa27.19■■□□□ 1.94
NRXN1-220ENST00000611589 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
NRXN1-220ENST00000611589 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.93
NRXN1-220ENST00000611589 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.93
NRXN1-220ENST00000611589 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
NRXN1-220ENST00000611589 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
NRXN1-220ENST00000611589 HNRNPUL2Q1KMD3 747 aaKnown RBP27.08■■□□□ 1.93
NRXN1-220ENST00000611589 P3H3Q8IVL6 736 aa27.06■■□□□ 1.92
NRXN1-220ENST00000611589 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
NRXN1-220ENST00000611589 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
NRXN1-220ENST00000611589 UGGT2Q9NYU1 1516 aa27■■□□□ 1.91
NRXN1-220ENST00000611589 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
NRXN1-220ENST00000611589 LRRIQ1Q96JM4 1722 aa26.94■■□□□ 1.9
NRXN1-220ENST00000611589 KIAA0586Q9BVV6 1533 aa26.94■■□□□ 1.9
NRXN1-220ENST00000611589 HECW1Q76N89 1606 aa26.89■■□□□ 1.9
NRXN1-220ENST00000611589 PHLDB1Q86UU1 1377 aa26.89■■□□□ 1.89
NRXN1-220ENST00000611589 SYNJ2O15056 1496 aa26.89■■□□□ 1.89
NRXN1-220ENST00000611589 CCDC18Q5T9S5 1454 aa26.88■■□□□ 1.89
NRXN1-220ENST00000611589 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
NRXN1-220ENST00000611589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
NRXN1-220ENST00000611589 EHBP1L1Q8N3D4 1523 aa26.84■■□□□ 1.89
NRXN1-220ENST00000611589 KIAA0556O60303 1618 aa26.83■■□□□ 1.89
NRXN1-220ENST00000611589 CLSPNQ9HAW4 1339 aa26.82■■□□□ 1.88
NRXN1-220ENST00000611589 SUPT6HQ7KZ85 1726 aaKnown RBP26.79■■□□□ 1.88
NRXN1-220ENST00000611589 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
NRXN1-220ENST00000611589 CEP170Q5SW79 1584 aa26.78■■□□□ 1.88
NRXN1-220ENST00000611589 DISP1Q96F81 1524 aa26.77■■□□□ 1.88
NRXN1-220ENST00000611589 NUP160Q12769 1436 aa26.74■■□□□ 1.87
NRXN1-220ENST00000611589 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
NRXN1-220ENST00000611589 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
NRXN1-220ENST00000611589 ARHGEF11O15085 1522 aa26.71■■□□□ 1.87
NRXN1-220ENST00000611589 EPRSP07814 1512 aaKnown RBP26.71■■□□□ 1.87
NRXN1-220ENST00000611589 NCOA2Q15596 1464 aa26.7■■□□□ 1.86
NRXN1-220ENST00000611589 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
NRXN1-220ENST00000611589 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
NRXN1-220ENST00000611589 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
NRXN1-220ENST00000611589 RAPGEF6Q8TEU7 1601 aa26.64■■□□□ 1.86
NRXN1-220ENST00000611589 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
NRXN1-220ENST00000611589 FAM50AQ14320 339 aaKnown RBP26.62■■□□□ 1.85
NRXN1-220ENST00000611589 RAB3GAP2Q9H2M9 1393 aa26.6■■□□□ 1.85
NRXN1-220ENST00000611589 ITGAEP38570 1179 aa26.59■■□□□ 1.85
NRXN1-220ENST00000611589 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
NRXN1-220ENST00000611589 CARMIL2Q6F5E8 1435 aa26.58■■□□□ 1.84
NRXN1-220ENST00000611589 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
NRXN1-220ENST00000611589 NUP153P49790 1475 aaKnown RBP26.54■■□□□ 1.84
NRXN1-220ENST00000611589 TCOF1Q13428 1488 aaKnown RBP26.53■■□□□ 1.84
NRXN1-220ENST00000611589 FBLN2P98095 1184 aa26.5■■□□□ 1.83
NRXN1-220ENST00000611589 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
NRXN1-220ENST00000611589 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
NRXN1-220ENST00000611589 CHD1O14646 1710 aa26.47■■□□□ 1.83
NRXN1-220ENST00000611589 MAPKBP1O60336 1514 aa26.43■■□□□ 1.82
NRXN1-220ENST00000611589 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
NRXN1-220ENST00000611589 ABCA8O94911 1581 aa26.4■■□□□ 1.82
NRXN1-220ENST00000611589 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
NRXN1-220ENST00000611589 CDK11AQ9UQ88 783 aaPredicted RBP26.4■■□□□ 1.82
NRXN1-220ENST00000611589 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.82
NRXN1-220ENST00000611589 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
NRXN1-220ENST00000611589 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
NRXN1-220ENST00000611589 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
NRXN1-220ENST00000611589 AKNAQ7Z591 1439 aa26.36■■□□□ 1.81
NRXN1-220ENST00000611589 SHROOM2Q13796 1616 aa26.35■■□□□ 1.81
NRXN1-220ENST00000611589 GCC2Q8IWJ2 1684 aa26.35■■□□□ 1.81
NRXN1-220ENST00000611589 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.81
NRXN1-220ENST00000611589 NAIPQ13075 1403 aa26.31■■□□□ 1.8
NRXN1-220ENST00000611589 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
NRXN1-220ENST00000611589 DIEXFQ68CQ4 756 aaKnown RBP26.27■■□□□ 1.8
NRXN1-220ENST00000611589 UACAQ9BZF9 1416 aa26.26■■□□□ 1.79
NRXN1-220ENST00000611589 DNMT1P26358 1616 aaKnown RBP26.26■■□□□ 1.79
NRXN1-220ENST00000611589 ARID3CA6NKF2 412 aa26.25■■□□□ 1.79
NRXN1-220ENST00000611589 KIF14Q15058 1648 aa26.2■■□□□ 1.79
NRXN1-220ENST00000611589 PTPRGP23470 1445 aa26.19■■□□□ 1.78
NRXN1-220ENST00000611589 ATP10BO94823 1461 aa26.19■■□□□ 1.78
NRXN1-220ENST00000611589 TIMELESSQ9UNS1 1208 aa26.18■■□□□ 1.78
NRXN1-220ENST00000611589 DAPK1P53355 1430 aa26.17■■□□□ 1.78
NRXN1-220ENST00000611589 ROCK1Q13464 1354 aa26.17■■□□□ 1.78
NRXN1-220ENST00000611589 ACIN1Q9UKV3 1341 aaKnown RBP26.16■■□□□ 1.78
NRXN1-220ENST00000611589 CLASP1Q7Z460 1538 aa26.15■■□□□ 1.78
NRXN1-220ENST00000611589 GPATCH8Q9UKJ3 1502 aaKnown RBP26.15■■□□□ 1.78
NRXN1-220ENST00000611589 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
NRXN1-220ENST00000611589 CDC42BPAQ5VT25 1732 aa26.12■■□□□ 1.77
NRXN1-220ENST00000611589 ABCC5O15440 1437 aa26.11■■□□□ 1.77
NRXN1-220ENST00000611589 ABCC10Q5T3U5 1492 aa26.1■■□□□ 1.77
NRXN1-220ENST00000611589 CROCC2H7BZ55 1655 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms