RNA–Protein interactions for RNA: ENST00000611589.4

NRXN1-220, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-220ENST00000611589 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
NRXN1-220ENST00000611589 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
NRXN1-220ENST00000611589 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
NRXN1-220ENST00000611589 DCAF1Q9Y4B6 1507 aa32.8■■■□□ 2.84
NRXN1-220ENST00000611589 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
NRXN1-220ENST00000611589 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
NRXN1-220ENST00000611589 MYO15BQ96JP2 1530 aa32.22■■■□□ 2.75
NRXN1-220ENST00000611589 ABCC9O60706 1549 aa31.83■■■□□ 2.69
NRXN1-220ENST00000611589 NACADO15069 1562 aa31.83■■■□□ 2.69
NRXN1-220ENST00000611589 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
NRXN1-220ENST00000611589 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
NRXN1-220ENST00000611589 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
NRXN1-220ENST00000611589 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
NRXN1-220ENST00000611589 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
NRXN1-220ENST00000611589 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.5
NRXN1-220ENST00000611589 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
NRXN1-220ENST00000611589 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
NRXN1-220ENST00000611589 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
NRXN1-220ENST00000611589 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
NRXN1-220ENST00000611589 WIZO95785 1651 aa30.36■■■□□ 2.45
NRXN1-220ENST00000611589 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
NRXN1-220ENST00000611589 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
NRXN1-220ENST00000611589 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
NRXN1-220ENST00000611589 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
NRXN1-220ENST00000611589 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
NRXN1-220ENST00000611589 SMARCA2P51531 1590 aa29.82■■■□□ 2.37
NRXN1-220ENST00000611589 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
NRXN1-220ENST00000611589 ATAD2BQ9ULI0 1458 aa29.66■■■□□ 2.34
NRXN1-220ENST00000611589 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
NRXN1-220ENST00000611589 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
NRXN1-220ENST00000611589 HMGXB3Q12766 1538 aa29.39■■■□□ 2.29
NRXN1-220ENST00000611589 NCAPD3P42695 1498 aa29.33■■■□□ 2.29
NRXN1-220ENST00000611589 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
NRXN1-220ENST00000611589 ABCC8Q09428 1581 aa29.27■■■□□ 2.28
NRXN1-220ENST00000611589 FAM9AQ8IZU1 332 aaPredicted RBP29.05■■■□□ 2.24
NRXN1-220ENST00000611589 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
NRXN1-220ENST00000611589 EEA1Q15075 1411 aa28.99■■■□□ 2.23
NRXN1-220ENST00000611589 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
NRXN1-220ENST00000611589 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
NRXN1-220ENST00000611589 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
NRXN1-220ENST00000611589 CFTRP13569 1480 aa28.83■■■□□ 2.21
NRXN1-220ENST00000611589 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
NRXN1-220ENST00000611589 SOGA1O94964 1423 aa28.81■■■□□ 2.2
NRXN1-220ENST00000611589 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
NRXN1-220ENST00000611589 RUSC2Q8N2Y8 1516 aa28.67■■■□□ 2.18
NRXN1-220ENST00000611589 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
NRXN1-220ENST00000611589 KIF21BO75037 1637 aa28.6■■■□□ 2.17
NRXN1-220ENST00000611589 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
NRXN1-220ENST00000611589 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
NRXN1-220ENST00000611589 TNIKQ9UKE5 1360 aa28.56■■■□□ 2.16
NRXN1-220ENST00000611589 CUX1P39880 1505 aa28.56■■■□□ 2.16
NRXN1-220ENST00000611589 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
NRXN1-220ENST00000611589 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
NRXN1-220ENST00000611589 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
NRXN1-220ENST00000611589 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
NRXN1-220ENST00000611589 CEP162Q5TB80 1403 aa28.44■■■□□ 2.14
NRXN1-220ENST00000611589 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
NRXN1-220ENST00000611589 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
NRXN1-220ENST00000611589 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
NRXN1-220ENST00000611589 FANCD2Q9BXW9 1451 aa28.28■■■□□ 2.12
NRXN1-220ENST00000611589 KIF27Q86VH2 1401 aa28.27■■■□□ 2.12
NRXN1-220ENST00000611589 HRCP23327 699 aa28.24■■■□□ 2.11
NRXN1-220ENST00000611589 PRXQ9BXM0 1461 aa28.23■■■□□ 2.11
NRXN1-220ENST00000611589 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
NRXN1-220ENST00000611589 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
NRXN1-220ENST00000611589 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
NRXN1-220ENST00000611589 NESP48681 1621 aa28.12■■■□□ 2.09
NRXN1-220ENST00000611589 CLIP1P30622 1438 aa28.09■■■□□ 2.09
NRXN1-220ENST00000611589 CUX2O14529 1486 aa28.06■■■□□ 2.08
NRXN1-220ENST00000611589 TOPBP1Q92547 1522 aa28.05■■■□□ 2.08
NRXN1-220ENST00000611589 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
NRXN1-220ENST00000611589 VPS8Q8N3P4 1428 aa27.96■■■□□ 2.07
NRXN1-220ENST00000611589 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.07
NRXN1-220ENST00000611589 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
NRXN1-220ENST00000611589 IGF1RP08069 1367 aa27.93■■■□□ 2.06
NRXN1-220ENST00000611589 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
NRXN1-220ENST00000611589 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
NRXN1-220ENST00000611589 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
NRXN1-220ENST00000611589 PPARGC1BQ86YN6 1023 aaKnown RBP27.83■■■□□ 2.04
NRXN1-220ENST00000611589 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
NRXN1-220ENST00000611589 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
NRXN1-220ENST00000611589 CARMIL1Q5VZK9 1371 aa27.8■■■□□ 2.04
NRXN1-220ENST00000611589 CUL7Q14999 1698 aa27.8■■■□□ 2.04
NRXN1-220ENST00000611589 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
NRXN1-220ENST00000611589 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
NRXN1-220ENST00000611589 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
NRXN1-220ENST00000611589 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
NRXN1-220ENST00000611589 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
NRXN1-220ENST00000611589 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
NRXN1-220ENST00000611589 APLP2Q06481 763 aa27.61■■■□□ 2.01
NRXN1-220ENST00000611589 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
NRXN1-220ENST00000611589 CTTNBP2Q8WZ74 1663 aa27.57■■■□□ 2
NRXN1-220ENST00000611589 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
NRXN1-220ENST00000611589 TTBK1Q5TCY1 1321 aaPredicted RBP27.5■■□□□ 1.99
NRXN1-220ENST00000611589 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
NRXN1-220ENST00000611589 WDR62O43379 1518 aa27.48■■□□□ 1.99
NRXN1-220ENST00000611589 TDRD9Q8NDG6 1382 aaKnown RBP27.46■■□□□ 1.99
NRXN1-220ENST00000611589 PBRM1Q86U86 1689 aa27.45■■□□□ 1.99
NRXN1-220ENST00000611589 MAP3K1Q13233 1512 aa27.44■■□□□ 1.98
NRXN1-220ENST00000611589 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms