RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
SRRT-213ENST00000611405 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
SRRT-213ENST00000611405 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
SRRT-213ENST00000611405 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
SRRT-213ENST00000611405 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.44
SRRT-213ENST00000611405 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.431e-9■■■■■ 27
SRRT-213ENST00000611405 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
SRRT-213ENST00000611405 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
SRRT-213ENST00000611405 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
SRRT-213ENST00000611405 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
SRRT-213ENST00000611405 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
SRRT-213ENST00000611405 CASKIN1Q8WXD9 1431 aa17.74■□□□□ 0.43
SRRT-213ENST00000611405 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
SRRT-213ENST00000611405 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
SRRT-213ENST00000611405 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
SRRT-213ENST00000611405 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
SRRT-213ENST00000611405 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
SRRT-213ENST00000611405 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
SRRT-213ENST00000611405 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
SRRT-213ENST00000611405 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
SRRT-213ENST00000611405 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
SRRT-213ENST00000611405 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
SRRT-213ENST00000611405 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
SRRT-213ENST00000611405 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
SRRT-213ENST00000611405 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
SRRT-213ENST00000611405 WDR62O43379 1518 aa17.62■□□□□ 0.41
SRRT-213ENST00000611405 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
SRRT-213ENST00000611405 ADAMTS12P58397 1594 aa17.61■□□□□ 0.41
SRRT-213ENST00000611405 ITGAEP38570 1179 aa17.59■□□□□ 0.41
SRRT-213ENST00000611405 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.4
SRRT-213ENST00000611405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
SRRT-213ENST00000611405 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
SRRT-213ENST00000611405 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
SRRT-213ENST00000611405 RAB3GAP2Q9H2M9 1393 aa17.54■□□□□ 0.4
SRRT-213ENST00000611405 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
SRRT-213ENST00000611405 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
SRRT-213ENST00000611405 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
SRRT-213ENST00000611405 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
SRRT-213ENST00000611405 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
SRRT-213ENST00000611405 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
SRRT-213ENST00000611405 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
SRRT-213ENST00000611405 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
SRRT-213ENST00000611405 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
SRRT-213ENST00000611405 HECW1Q76N89 1606 aa17.45■□□□□ 0.38
SRRT-213ENST00000611405 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
SRRT-213ENST00000611405 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
SRRT-213ENST00000611405 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
SRRT-213ENST00000611405 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
SRRT-213ENST00000611405 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
SRRT-213ENST00000611405 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
SRRT-213ENST00000611405 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
SRRT-213ENST00000611405 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
SRRT-213ENST00000611405 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
SRRT-213ENST00000611405 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
SRRT-213ENST00000611405 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
SRRT-213ENST00000611405 DISP1Q96F81 1524 aa17.35■□□□□ 0.37
SRRT-213ENST00000611405 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
SRRT-213ENST00000611405 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
SRRT-213ENST00000611405 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
SRRT-213ENST00000611405 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
SRRT-213ENST00000611405 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
SRRT-213ENST00000611405 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
SRRT-213ENST00000611405 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
SRRT-213ENST00000611405 CDK13Q14004 1512 aaKnown RBP17.3■□□□□ 0.36
SRRT-213ENST00000611405 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
SRRT-213ENST00000611405 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
SRRT-213ENST00000611405 MIA2Q96PC5 1412 aa17.28■□□□□ 0.36
SRRT-213ENST00000611405 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
SRRT-213ENST00000611405 MIER1Q8N108 512 aa17.27■□□□□ 0.36
SRRT-213ENST00000611405 CEP170Q5SW79 1584 aa17.27■□□□□ 0.36
SRRT-213ENST00000611405 NAIPQ13075 1403 aa17.26■□□□□ 0.35
SRRT-213ENST00000611405 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
SRRT-213ENST00000611405 NUP160Q12769 1436 aa17.25■□□□□ 0.35
SRRT-213ENST00000611405 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
SRRT-213ENST00000611405 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
SRRT-213ENST00000611405 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
SRRT-213ENST00000611405 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
SRRT-213ENST00000611405 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
SRRT-213ENST00000611405 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
SRRT-213ENST00000611405 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
SRRT-213ENST00000611405 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
SRRT-213ENST00000611405 FBLN2P98095 1184 aa17.21■□□□□ 0.35
SRRT-213ENST00000611405 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
SRRT-213ENST00000611405 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
SRRT-213ENST00000611405 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
SRRT-213ENST00000611405 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
SRRT-213ENST00000611405 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
SRRT-213ENST00000611405 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
SRRT-213ENST00000611405 CHIC2Q9UKJ5 165 aa17.13■□□□□ 0.33
SRRT-213ENST00000611405 PLB1Q6P1J6 1458 aa17.13■□□□□ 0.33
SRRT-213ENST00000611405 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
SRRT-213ENST00000611405 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
SRRT-213ENST00000611405 DAPK1P53355 1430 aa17.1■□□□□ 0.33
SRRT-213ENST00000611405 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
SRRT-213ENST00000611405 DNMT1P26358 1616 aaKnown RBP17.08■□□□□ 0.32
SRRT-213ENST00000611405 ABCC5O15440 1437 aa17.07■□□□□ 0.32
SRRT-213ENST00000611405 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
SRRT-213ENST00000611405 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
SRRT-213ENST00000611405 ABCA8O94911 1581 aa17.07■□□□□ 0.32
SRRT-213ENST00000611405 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms