RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
SRRT-213ENST00000611405 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
SRRT-213ENST00000611405 MT1GP13640 62 aa3.98□□□□□ -1.77
SRRT-213ENST00000611405 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
SRRT-213ENST00000611405 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
SRRT-213ENST00000611405 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
SRRT-213ENST00000611405 MT1MQ8N339 61 aa3.95□□□□□ -1.78
SRRT-213ENST00000611405 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
SRRT-213ENST00000611405 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
SRRT-213ENST00000611405 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
SRRT-213ENST00000611405 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
SRRT-213ENST00000611405 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
SRRT-213ENST00000611405 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
SRRT-213ENST00000611405 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
SRRT-213ENST00000611405 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
SRRT-213ENST00000611405 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
SRRT-213ENST00000611405 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
SRRT-213ENST00000611405 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
SRRT-213ENST00000611405 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
SRRT-213ENST00000611405 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
SRRT-213ENST00000611405 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
SRRT-213ENST00000611405 SPRR2EP22531 72 aa3.61□□□□□ -1.83
SRRT-213ENST00000611405 SPRR2BP35325 72 aa3.61□□□□□ -1.83
SRRT-213ENST00000611405 SPRR2AP35326 72 aa3.61□□□□□ -1.83
SRRT-213ENST00000611405 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
SRRT-213ENST00000611405 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
SRRT-213ENST00000611405 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
SRRT-213ENST00000611405 MT1AP04731 61 aa3.55□□□□□ -1.84
SRRT-213ENST00000611405 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
SRRT-213ENST00000611405 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
SRRT-213ENST00000611405 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
SRRT-213ENST00000611405 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
SRRT-213ENST00000611405 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
SRRT-213ENST00000611405 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
SRRT-213ENST00000611405 SPRR2DP22532 72 aa3.47□□□□□ -1.85
SRRT-213ENST00000611405 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
SRRT-213ENST00000611405 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
SRRT-213ENST00000611405 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
SRRT-213ENST00000611405 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
SRRT-213ENST00000611405 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
SRRT-213ENST00000611405 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SRRT-213ENST00000611405 MT3P25713 68 aa3.36□□□□□ -1.87
SRRT-213ENST00000611405 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
SRRT-213ENST00000611405 NEBP20929 6669 aa3.28□□□□□ -1.88
SRRT-213ENST00000611405 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
SRRT-213ENST00000611405 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
SRRT-213ENST00000611405 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SRRT-213ENST00000611405 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
SRRT-213ENST00000611405 MT4P47944 62 aa3.01□□□□□ -1.93
SRRT-213ENST00000611405 PRM1P04553 51 aa3□□□□□ -1.93
SRRT-213ENST00000611405 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
SRRT-213ENST00000611405 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
SRRT-213ENST00000611405 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
SRRT-213ENST00000611405 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SRRT-213ENST00000611405 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
SRRT-213ENST00000611405 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
SRRT-213ENST00000611405 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
SRRT-213ENST00000611405 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
SRRT-213ENST00000611405 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
SRRT-213ENST00000611405 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SRRT-213ENST00000611405 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
SRRT-213ENST00000611405 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
SRRT-213ENST00000611405 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SRRT-213ENST00000611405 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SRRT-213ENST00000611405 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SRRT-213ENST00000611405 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SRRT-213ENST00000611405 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
SRRT-213ENST00000611405 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SRRT-213ENST00000611405 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SRRT-213ENST00000611405 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
SRRT-213ENST00000611405 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SRRT-213ENST00000611405 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
SRRT-213ENST00000611405 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
SRRT-213ENST00000611405 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SRRT-213ENST00000611405 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
SRRT-213ENST00000611405 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
SRRT-213ENST00000611405 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 14.8 ms