RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 CUL7Q14999 1698 aa28.24■■■□□ 2.11
SNAPC3-207ENST00000610884 APLP2Q06481 763 aa28.23■■■□□ 2.11
SNAPC3-207ENST00000610884 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
SNAPC3-207ENST00000610884 GRIN2BQ13224 1484 aa28.19■■■□□ 2.1
SNAPC3-207ENST00000610884 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
SNAPC3-207ENST00000610884 KANK4Q5T7N3 995 aaPredicted RBP28.17■■■□□ 2.1
SNAPC3-207ENST00000610884 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
SNAPC3-207ENST00000610884 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
SNAPC3-207ENST00000610884 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
SNAPC3-207ENST00000610884 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
SNAPC3-207ENST00000610884 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
SNAPC3-207ENST00000610884 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
SNAPC3-207ENST00000610884 ARID3CA6NKF2 412 aa27.99■■■□□ 2.07
SNAPC3-207ENST00000610884 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
SNAPC3-207ENST00000610884 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
SNAPC3-207ENST00000610884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
SNAPC3-207ENST00000610884 PCF11O94913 1555 aaKnown RBP27.84■■■□□ 2.05
SNAPC3-207ENST00000610884 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
SNAPC3-207ENST00000610884 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
SNAPC3-207ENST00000610884 IQGAP2Q13576 1575 aa27.83■■■□□ 2.05
SNAPC3-207ENST00000610884 EFCAB5A4FU69 1503 aa27.78■■■□□ 2.04
SNAPC3-207ENST00000610884 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
SNAPC3-207ENST00000610884 SAMD9Q5K651 1589 aa27.76■■■□□ 2.03
SNAPC3-207ENST00000610884 ITGAEP38570 1179 aa27.76■■■□□ 2.03
SNAPC3-207ENST00000610884 KIAA0586Q9BVV6 1533 aa27.74■■■□□ 2.03
SNAPC3-207ENST00000610884 JPH4Q96JJ6 628 aa27.73■■■□□ 2.03
SNAPC3-207ENST00000610884 FMN1Q68DA7 1419 aa27.7■■■□□ 2.03
SNAPC3-207ENST00000610884 TIAM1Q13009 1591 aa27.69■■■□□ 2.02
SNAPC3-207ENST00000610884 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
SNAPC3-207ENST00000610884 DISP1Q96F81 1524 aa27.66■■■□□ 2.02
SNAPC3-207ENST00000610884 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.01
SNAPC3-207ENST00000610884 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
SNAPC3-207ENST00000610884 NUP160Q12769 1436 aa27.6■■■□□ 2.01
SNAPC3-207ENST00000610884 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
SNAPC3-207ENST00000610884 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
SNAPC3-207ENST00000610884 LRRIQ1Q96JM4 1722 aa27.59■■■□□ 2.01
SNAPC3-207ENST00000610884 PHLDB1Q86UU1 1377 aa27.59■■■□□ 2.01
SNAPC3-207ENST00000610884 CHD1O14646 1710 aa27.57■■■□□ 2
SNAPC3-207ENST00000610884 FAM50AQ14320 339 aaKnown RBP27.55■■■□□ 2
SNAPC3-207ENST00000610884 KIAA0556O60303 1618 aa27.54■■■□□ 2
SNAPC3-207ENST00000610884 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
SNAPC3-207ENST00000610884 CDK13Q14004 1512 aaKnown RBP27.52■■■□□ 2
SNAPC3-207ENST00000610884 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
SNAPC3-207ENST00000610884 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
SNAPC3-207ENST00000610884 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
SNAPC3-207ENST00000610884 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
SNAPC3-207ENST00000610884 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
SNAPC3-207ENST00000610884 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
SNAPC3-207ENST00000610884 EPRSP07814 1512 aaKnown RBP27.41■■□□□ 1.98
SNAPC3-207ENST00000610884 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
SNAPC3-207ENST00000610884 CARMIL2Q6F5E8 1435 aa27.4■■□□□ 1.98
SNAPC3-207ENST00000610884 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
SNAPC3-207ENST00000610884 NUP153P49790 1475 aaKnown RBP27.36■■□□□ 1.97
SNAPC3-207ENST00000610884 HECW1Q76N89 1606 aa27.33■■□□□ 1.97
SNAPC3-207ENST00000610884 NCOA2Q15596 1464 aa27.31■■□□□ 1.96
SNAPC3-207ENST00000610884 RAPGEF6Q8TEU7 1601 aa27.29■■□□□ 1.96
SNAPC3-207ENST00000610884 PTPRGP23470 1445 aa27.28■■□□□ 1.96
SNAPC3-207ENST00000610884 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
SNAPC3-207ENST00000610884 FGD6Q6ZV73 1430 aa27.21■■□□□ 1.95
SNAPC3-207ENST00000610884 ZNF644Q9H582 1327 aaPredicted RBP27.19■■□□□ 1.94
SNAPC3-207ENST00000610884 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
SNAPC3-207ENST00000610884 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
SNAPC3-207ENST00000610884 EHBP1L1Q8N3D4 1523 aa27.18■■□□□ 1.94
SNAPC3-207ENST00000610884 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
SNAPC3-207ENST00000610884 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
SNAPC3-207ENST00000610884 CDK11AQ9UQ88 783 aaPredicted RBP27.14■■□□□ 1.94
SNAPC3-207ENST00000610884 ATP10BO94823 1461 aa27.13■■□□□ 1.93
SNAPC3-207ENST00000610884 ZNF777Q9ULD5 760 aaPredicted RBP27.13■■□□□ 1.93
SNAPC3-207ENST00000610884 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
SNAPC3-207ENST00000610884 PLEKHD1A6NEE1 506 aa27.1■■□□□ 1.93
SNAPC3-207ENST00000610884 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
SNAPC3-207ENST00000610884 ABCA8O94911 1581 aa27.1■■□□□ 1.93
SNAPC3-207ENST00000610884 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
SNAPC3-207ENST00000610884 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
SNAPC3-207ENST00000610884 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
SNAPC3-207ENST00000610884 KCNH8Q96L42 1107 aa27.06■■□□□ 1.92
SNAPC3-207ENST00000610884 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
SNAPC3-207ENST00000610884 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
SNAPC3-207ENST00000610884 KIF14Q15058 1648 aa27.04■■□□□ 1.92
SNAPC3-207ENST00000610884 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
SNAPC3-207ENST00000610884 TROQ12816 1431 aaPredicted RBP27.01■■□□□ 1.92
SNAPC3-207ENST00000610884 PTPN23Q9H3S7 1636 aa27■■□□□ 1.91
SNAPC3-207ENST00000610884 DHX57Q6P158 1386 aaKnown RBP27■■□□□ 1.91
SNAPC3-207ENST00000610884 CFDP1Q9UEE9 299 aaPredicted RBP26.99■■□□□ 1.91
SNAPC3-207ENST00000610884 SETD5Q9C0A6 1442 aa26.97■■□□□ 1.91
SNAPC3-207ENST00000610884 GPATCH8Q9UKJ3 1502 aaKnown RBP26.88■■□□□ 1.89
SNAPC3-207ENST00000610884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.88■■□□□ 1.89
SNAPC3-207ENST00000610884 ABCC2Q92887 1545 aa26.84■■□□□ 1.89
SNAPC3-207ENST00000610884 MIA2Q96PC5 1412 aa26.83■■□□□ 1.89
SNAPC3-207ENST00000610884 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.88
SNAPC3-207ENST00000610884 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
SNAPC3-207ENST00000610884 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
SNAPC3-207ENST00000610884 NEUROD1Q13562 356 aa26.8■■□□□ 1.88
SNAPC3-207ENST00000610884 NAIPQ13075 1403 aa26.79■■□□□ 1.88
SNAPC3-207ENST00000610884 ABCC10Q5T3U5 1492 aa26.77■■□□□ 1.88
SNAPC3-207ENST00000610884 ABCC5O15440 1437 aa26.77■■□□□ 1.88
SNAPC3-207ENST00000610884 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.87
SNAPC3-207ENST00000610884 TRIM52Q96A61 297 aa26.75■■□□□ 1.87
SNAPC3-207ENST00000610884 DAPK1P53355 1430 aa26.75■■□□□ 1.87
SNAPC3-207ENST00000610884 HFM1A2PYH4 1435 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms