RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
LARP4B-210ENST00000609318 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
LARP4B-210ENST00000609318 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
LARP4B-210ENST00000609318 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
LARP4B-210ENST00000609318 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
LARP4B-210ENST00000609318 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
LARP4B-210ENST00000609318 CFTRP13569 1480 aa14.24□□□□□ -0.13
LARP4B-210ENST00000609318 CFDP1Q9UEE9 299 aaPredicted RBP14.22□□□□□ -0.13
LARP4B-210ENST00000609318 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
LARP4B-210ENST00000609318 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
LARP4B-210ENST00000609318 GTF3C3Q9Y5Q9 886 aa14.2□□□□□ -0.14
LARP4B-210ENST00000609318 IGF1RP08069 1367 aa14.2□□□□□ -0.14
LARP4B-210ENST00000609318 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
LARP4B-210ENST00000609318 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
LARP4B-210ENST00000609318 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
LARP4B-210ENST00000609318 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
LARP4B-210ENST00000609318 KCNH8Q96L42 1107 aa14.17□□□□□ -0.14
LARP4B-210ENST00000609318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.149e-8■□□□□ 8.3
LARP4B-210ENST00000609318 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
LARP4B-210ENST00000609318 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
LARP4B-210ENST00000609318 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
LARP4B-210ENST00000609318 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
LARP4B-210ENST00000609318 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
LARP4B-210ENST00000609318 CARMIL2Q6F5E8 1435 aa14.12□□□□□ -0.15
LARP4B-210ENST00000609318 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
LARP4B-210ENST00000609318 KIF21BO75037 1637 aa14.1□□□□□ -0.15
LARP4B-210ENST00000609318 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
LARP4B-210ENST00000609318 MIER1Q8N108 512 aa14.1□□□□□ -0.15
LARP4B-210ENST00000609318 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
LARP4B-210ENST00000609318 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
LARP4B-210ENST00000609318 BCL11AQ9H165 835 aa14.09□□□□□ -0.15
LARP4B-210ENST00000609318 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
LARP4B-210ENST00000609318 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
LARP4B-210ENST00000609318 EIF5BO60841 1220 aaKnown RBP14.07□□□□□ -0.16
LARP4B-210ENST00000609318 CUX1P39880 1505 aa14.07□□□□□ -0.16
LARP4B-210ENST00000609318 NESP48681 1621 aa14.06□□□□□ -0.16
LARP4B-210ENST00000609318 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
LARP4B-210ENST00000609318 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
LARP4B-210ENST00000609318 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
LARP4B-210ENST00000609318 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
LARP4B-210ENST00000609318 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
LARP4B-210ENST00000609318 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
LARP4B-210ENST00000609318 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
LARP4B-210ENST00000609318 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
LARP4B-210ENST00000609318 NEFMP07197 916 aa14.03□□□□□ -0.16
LARP4B-210ENST00000609318 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
LARP4B-210ENST00000609318 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
LARP4B-210ENST00000609318 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
LARP4B-210ENST00000609318 BCANQ96GW7 911 aa13.99□□□□□ -0.17
LARP4B-210ENST00000609318 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
LARP4B-210ENST00000609318 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
LARP4B-210ENST00000609318 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
LARP4B-210ENST00000609318 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.172e-8■■■■■ 40.2
LARP4B-210ENST00000609318 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
LARP4B-210ENST00000609318 CCDC18Q5T9S5 1454 aa13.94□□□□□ -0.18
LARP4B-210ENST00000609318 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
LARP4B-210ENST00000609318 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
LARP4B-210ENST00000609318 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
LARP4B-210ENST00000609318 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
LARP4B-210ENST00000609318 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
LARP4B-210ENST00000609318 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
LARP4B-210ENST00000609318 HSP90AA1P07900 732 aaKnown RBP13.9□□□□□ -0.18
LARP4B-210ENST00000609318 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
LARP4B-210ENST00000609318 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
LARP4B-210ENST00000609318 MRS2Q9HD23 443 aa13.89□□□□□ -0.19
LARP4B-210ENST00000609318 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
LARP4B-210ENST00000609318 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
LARP4B-210ENST00000609318 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
LARP4B-210ENST00000609318 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
LARP4B-210ENST00000609318 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
LARP4B-210ENST00000609318 CASKIN1Q8WXD9 1431 aa13.87□□□□□ -0.19
LARP4B-210ENST00000609318 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
LARP4B-210ENST00000609318 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
LARP4B-210ENST00000609318 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
LARP4B-210ENST00000609318 ANKRD30AQ9BXX3 1397 aa13.86□□□□□ -0.19
LARP4B-210ENST00000609318 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
LARP4B-210ENST00000609318 PKD2Q13563 968 aa13.85□□□□□ -0.19
LARP4B-210ENST00000609318 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
LARP4B-210ENST00000609318 FOXD1Q16676 465 aa13.84□□□□□ -0.19
LARP4B-210ENST00000609318 PTPRGP23470 1445 aa13.84□□□□□ -0.19
LARP4B-210ENST00000609318 IFT140Q96RY7 1462 aa13.84□□□□□ -0.19
LARP4B-210ENST00000609318 FKBP8Q14318 412 aa13.84□□□□□ -0.19
LARP4B-210ENST00000609318 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
LARP4B-210ENST00000609318 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
LARP4B-210ENST00000609318 EFCAB5A4FU69 1503 aa13.82□□□□□ -0.2
LARP4B-210ENST00000609318 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
LARP4B-210ENST00000609318 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
LARP4B-210ENST00000609318 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
LARP4B-210ENST00000609318 FYCO1Q9BQS8 1478 aa13.81□□□□□ -0.2
LARP4B-210ENST00000609318 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
LARP4B-210ENST00000609318 NUP155O75694 1391 aa13.8□□□□□ -0.2
LARP4B-210ENST00000609318 HNRNPMP52272 730 aaKnown RBP eCLIP13.8□□□□□ -0.2
LARP4B-210ENST00000609318 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
LARP4B-210ENST00000609318 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
LARP4B-210ENST00000609318 RRBP1Q9P2E9 1410 aaKnown RBP13.78□□□□□ -0.2
LARP4B-210ENST00000609318 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
LARP4B-210ENST00000609318 KANK1Q14678 1352 aa13.77□□□□□ -0.21
LARP4B-210ENST00000609318 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
LARP4B-210ENST00000609318 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
LARP4B-210ENST00000609318 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms