RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
LARP4B-210ENST00000609318 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
LARP4B-210ENST00000609318 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
LARP4B-210ENST00000609318 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
LARP4B-210ENST00000609318 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
LARP4B-210ENST00000609318 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
LARP4B-210ENST00000609318 ABCC9O60706 1549 aa16.36■□□□□ 0.21
LARP4B-210ENST00000609318 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
LARP4B-210ENST00000609318 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
LARP4B-210ENST00000609318 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
LARP4B-210ENST00000609318 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
LARP4B-210ENST00000609318 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
LARP4B-210ENST00000609318 APLP2Q06481 763 aa16■□□□□ 0.15
LARP4B-210ENST00000609318 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
LARP4B-210ENST00000609318 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
LARP4B-210ENST00000609318 ERICH6Q7L0X2 663 aa15.87■□□□□ 0.13
LARP4B-210ENST00000609318 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
LARP4B-210ENST00000609318 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
LARP4B-210ENST00000609318 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
LARP4B-210ENST00000609318 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
LARP4B-210ENST00000609318 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
LARP4B-210ENST00000609318 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
LARP4B-210ENST00000609318 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
LARP4B-210ENST00000609318 NACADO15069 1562 aa15.63■□□□□ 0.09
LARP4B-210ENST00000609318 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
LARP4B-210ENST00000609318 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
LARP4B-210ENST00000609318 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
LARP4B-210ENST00000609318 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
LARP4B-210ENST00000609318 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
LARP4B-210ENST00000609318 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
LARP4B-210ENST00000609318 CENPBP07199 599 aaPredicted RBP15.43■□□□□ 0.06
LARP4B-210ENST00000609318 HRCP23327 699 aa15.38■□□□□ 0.05
LARP4B-210ENST00000609318 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
LARP4B-210ENST00000609318 MYT1Q01538 1121 aa15.32■□□□□ 0.04
LARP4B-210ENST00000609318 NEFLP07196 543 aa15.3■□□□□ 0.04
LARP4B-210ENST00000609318 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
LARP4B-210ENST00000609318 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
LARP4B-210ENST00000609318 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
LARP4B-210ENST00000609318 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
LARP4B-210ENST00000609318 ITGAEP38570 1179 aa15.15■□□□□ 0.02
LARP4B-210ENST00000609318 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
LARP4B-210ENST00000609318 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
LARP4B-210ENST00000609318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
LARP4B-210ENST00000609318 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0.01
LARP4B-210ENST00000609318 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
LARP4B-210ENST00000609318 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
LARP4B-210ENST00000609318 EEA1Q15075 1411 aa14.96□□□□□ -0.01
LARP4B-210ENST00000609318 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
LARP4B-210ENST00000609318 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
LARP4B-210ENST00000609318 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
LARP4B-210ENST00000609318 WIZO95785 1651 aa14.9□□□□□ -0.02
LARP4B-210ENST00000609318 FBLN2P98095 1184 aa14.86□□□□□ -0.03
LARP4B-210ENST00000609318 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
LARP4B-210ENST00000609318 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
LARP4B-210ENST00000609318 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
LARP4B-210ENST00000609318 CLIP1P30622 1438 aa14.81□□□□□ -0.04
LARP4B-210ENST00000609318 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
LARP4B-210ENST00000609318 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
LARP4B-210ENST00000609318 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
LARP4B-210ENST00000609318 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
LARP4B-210ENST00000609318 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
LARP4B-210ENST00000609318 SOGA1O94964 1423 aa14.74□□□□□ -0.05
LARP4B-210ENST00000609318 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
LARP4B-210ENST00000609318 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
LARP4B-210ENST00000609318 MYT1LQ9UL68 1186 aa14.73□□□□□ -0.05
LARP4B-210ENST00000609318 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
LARP4B-210ENST00000609318 TRIM52Q96A61 297 aa14.7□□□□□ -0.06
LARP4B-210ENST00000609318 RTL5Q5HYW3 569 aaPredicted RBP14.7□□□□□ -0.06
LARP4B-210ENST00000609318 ARID3CA6NKF2 412 aa14.68□□□□□ -0.06
LARP4B-210ENST00000609318 NEUROD1Q13562 356 aa14.67□□□□□ -0.06
LARP4B-210ENST00000609318 CDK11AQ9UQ88 783 aaPredicted RBP14.64□□□□□ -0.07
LARP4B-210ENST00000609318 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
LARP4B-210ENST00000609318 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
LARP4B-210ENST00000609318 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
LARP4B-210ENST00000609318 CUX2O14529 1486 aa14.57□□□□□ -0.08
LARP4B-210ENST00000609318 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
LARP4B-210ENST00000609318 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
LARP4B-210ENST00000609318 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
LARP4B-210ENST00000609318 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
LARP4B-210ENST00000609318 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.09
LARP4B-210ENST00000609318 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
LARP4B-210ENST00000609318 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.09
LARP4B-210ENST00000609318 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
LARP4B-210ENST00000609318 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.1
LARP4B-210ENST00000609318 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
LARP4B-210ENST00000609318 VPS8Q8N3P4 1428 aa14.44□□□□□ -0.1
LARP4B-210ENST00000609318 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
LARP4B-210ENST00000609318 RUSC2Q8N2Y8 1516 aa14.42□□□□□ -0.1
LARP4B-210ENST00000609318 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
LARP4B-210ENST00000609318 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
LARP4B-210ENST00000609318 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
LARP4B-210ENST00000609318 TONSLQ96HA7 1378 aa14.37□□□□□ -0.11
LARP4B-210ENST00000609318 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
LARP4B-210ENST00000609318 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
LARP4B-210ENST00000609318 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
LARP4B-210ENST00000609318 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
LARP4B-210ENST00000609318 ANP32CO43423 234 aa14.35□□□□□ -0.11
LARP4B-210ENST00000609318 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
LARP4B-210ENST00000609318 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
LARP4B-210ENST00000609318 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms