RNA–Protein interactions for RNA: ENST00000605855.1

NANOGP3-201, Transcript of Nanog homeobox pseudogene 3, humanhuman

BASIC

Gene NANOGP3, Length 286 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP3-201ENST00000605855 KIF21BO75037 1637 aa9.22□□□□□ -0.93
NANOGP3-201ENST00000605855 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.93
NANOGP3-201ENST00000605855 WDR97A6NE52 1622 aa9.21□□□□□ -0.93
NANOGP3-201ENST00000605855 TNIKQ9UKE5 1360 aa9.21□□□□□ -0.94
NANOGP3-201ENST00000605855 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
NANOGP3-201ENST00000605855 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
NANOGP3-201ENST00000605855 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
NANOGP3-201ENST00000605855 PRXQ9BXM0 1461 aa9.16□□□□□ -0.94
NANOGP3-201ENST00000605855 SOGA1O94964 1423 aa9.16□□□□□ -0.94
NANOGP3-201ENST00000605855 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
NANOGP3-201ENST00000605855 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.95
NANOGP3-201ENST00000605855 FGD5Q6ZNL6 1462 aa9.14□□□□□ -0.95
NANOGP3-201ENST00000605855 POLA1P09884 1462 aaPredicted RBP9.12□□□□□ -0.95
NANOGP3-201ENST00000605855 WDR62O43379 1518 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 NESP48681 1621 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 SPDYE2Q495Y8 402 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 CUL7Q14999 1698 aa9.1□□□□□ -0.95
NANOGP3-201ENST00000605855 IFT140Q96RY7 1462 aa9.09□□□□□ -0.95
NANOGP3-201ENST00000605855 IGF1RP08069 1367 aa9.09□□□□□ -0.95
NANOGP3-201ENST00000605855 CUX2O14529 1486 aa9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 LOC105371045A0A1W2PR82 267 aa9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 SSUH2Q9Y2M2 353 aa9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
NANOGP3-201ENST00000605855 REM2Q8IYK8 340 aaPredicted RBP9.06□□□□□ -0.96
NANOGP3-201ENST00000605855 FAM9AQ8IZU1 332 aaPredicted RBP9.06□□□□□ -0.96
NANOGP3-201ENST00000605855 KIF21AQ7Z4S6 1674 aa9.05□□□□□ -0.96
NANOGP3-201ENST00000605855 CARMIL1Q5VZK9 1371 aa9.05□□□□□ -0.96
NANOGP3-201ENST00000605855 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
NANOGP3-201ENST00000605855 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
NANOGP3-201ENST00000605855 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
NANOGP3-201ENST00000605855 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
NANOGP3-201ENST00000605855 ABCA5Q8WWZ7 1642 aa9.04□□□□□ -0.96
NANOGP3-201ENST00000605855 GAPVD1Q14C86 1478 aa9.03□□□□□ -0.96
NANOGP3-201ENST00000605855 TARBP1Q13395 1621 aaKnown RBP9.03□□□□□ -0.96
NANOGP3-201ENST00000605855 SPDYE4A6NLX3 237 aa9.02□□□□□ -0.97
NANOGP3-201ENST00000605855 CLIP1P30622 1438 aa9□□□□□ -0.97
NANOGP3-201ENST00000605855 GRIN2BQ13224 1484 aa9□□□□□ -0.97
NANOGP3-201ENST00000605855 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
NANOGP3-201ENST00000605855 EFCAB5A4FU69 1503 aa8.99□□□□□ -0.97
NANOGP3-201ENST00000605855 THOC2Q8NI27 1593 aaKnown RBP8.98□□□□□ -0.97
NANOGP3-201ENST00000605855 VPS8Q8N3P4 1428 aa8.97□□□□□ -0.97
NANOGP3-201ENST00000605855 MAGI1Q96QZ7 1491 aaPredicted RBP8.97□□□□□ -0.97
NANOGP3-201ENST00000605855 RAD54L2Q9Y4B4 1467 aa8.97□□□□□ -0.97
NANOGP3-201ENST00000605855 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
NANOGP3-201ENST00000605855 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
NANOGP3-201ENST00000605855 TRIM26Q12899 539 aaPredicted RBP8.96□□□□□ -0.98
NANOGP3-201ENST00000605855 FKBP8Q14318 412 aa8.93□□□□□ -0.98
NANOGP3-201ENST00000605855 AQRO60306 1485 aaKnown RBP eCLIP8.92□□□□□ -0.98
NANOGP3-201ENST00000605855 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
NANOGP3-201ENST00000605855 FMN1Q68DA7 1419 aa8.91□□□□□ -0.98
NANOGP3-201ENST00000605855 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
NANOGP3-201ENST00000605855 PROM2Q8N271 834 aa8.9□□□□□ -0.98
NANOGP3-201ENST00000605855 PBRM1Q86U86 1689 aa8.9□□□□□ -0.98
NANOGP3-201ENST00000605855 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
NANOGP3-201ENST00000605855 ADAMTS12P58397 1594 aa8.9□□□□□ -0.99
NANOGP3-201ENST00000605855 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
NANOGP3-201ENST00000605855 KIAA0586Q9BVV6 1533 aa8.88□□□□□ -0.99
NANOGP3-201ENST00000605855 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
NANOGP3-201ENST00000605855 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
NANOGP3-201ENST00000605855 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
NANOGP3-201ENST00000605855 UGGT2Q9NYU1 1516 aa8.85□□□□□ -0.99
NANOGP3-201ENST00000605855 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
NANOGP3-201ENST00000605855 SAMD9Q5K651 1589 aa8.85□□□□□ -0.99
NANOGP3-201ENST00000605855 GRIN2AQ12879 1464 aa8.84□□□□□ -0.99
NANOGP3-201ENST00000605855 FYCO1Q9BQS8 1478 aa8.84□□□□□ -0.99
NANOGP3-201ENST00000605855 IQGAP2Q13576 1575 aa8.84□□□□□ -0.99
NANOGP3-201ENST00000605855 ARAP1Q96P48 1450 aa8.83□□□□□ -1
NANOGP3-201ENST00000605855 CASKIN1Q8WXD9 1431 aa8.83□□□□□ -1
NANOGP3-201ENST00000605855 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
NANOGP3-201ENST00000605855 NUP160Q12769 1436 aa8.82□□□□□ -1
NANOGP3-201ENST00000605855 SNAPC4Q5SXM2 1469 aa8.82□□□□□ -1
NANOGP3-201ENST00000605855 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
NANOGP3-201ENST00000605855 FXR2P51116 673 aaKnown RBP eCLIP8.81□□□□□ -1
NANOGP3-201ENST00000605855 POTEHQ6S545 545 aa8.81□□□□□ -1
NANOGP3-201ENST00000605855 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
NANOGP3-201ENST00000605855 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
NANOGP3-201ENST00000605855 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
NANOGP3-201ENST00000605855 CCDC18Q5T9S5 1454 aa8.8□□□□□ -1
NANOGP3-201ENST00000605855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.79□□□□□ -1
NANOGP3-201ENST00000605855 ZEB1P37275 1124 aaPredicted RBP8.79□□□□□ -1
NANOGP3-201ENST00000605855 TIAM1Q13009 1591 aa8.75□□□□□ -1.01
NANOGP3-201ENST00000605855 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
NANOGP3-201ENST00000605855 PCGF6Q9BYE7 350 aa8.75□□□□□ -1.01
NANOGP3-201ENST00000605855 CDK11AQ9UQ88 783 aaPredicted RBP8.75□□□□□ -1.01
NANOGP3-201ENST00000605855 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
NANOGP3-201ENST00000605855 RRBP1Q9P2E9 1410 aaKnown RBP8.73□□□□□ -1.01
NANOGP3-201ENST00000605855 CFAP43Q8NDM7 1665 aa8.73□□□□□ -1.01
NANOGP3-201ENST00000605855 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
NANOGP3-201ENST00000605855 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
NANOGP3-201ENST00000605855 PRKAR2AP13861 404 aaKnown RBP8.72□□□□□ -1.01
NANOGP3-201ENST00000605855 JPH4Q96JJ6 628 aa8.72□□□□□ -1.01
NANOGP3-201ENST00000605855 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
NANOGP3-201ENST00000605855 HRCP23327 699 aa8.71□□□□□ -1.02
NANOGP3-201ENST00000605855 DISP1Q96F81 1524 aa8.7□□□□□ -1.02
NANOGP3-201ENST00000605855 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms