RNA–Protein interactions for RNA: ENST00000605855.1

NANOGP3-201, Transcript of Nanog homeobox pseudogene 3, humanhuman

BASIC

Gene NANOGP3, Length 286 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP3-201ENST00000605855 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
NANOGP3-201ENST00000605855 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
NANOGP3-201ENST00000605855 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
NANOGP3-201ENST00000605855 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
NANOGP3-201ENST00000605855 FOXD1Q16676 465 aa13.03□□□□□ -0.32
NANOGP3-201ENST00000605855 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
NANOGP3-201ENST00000605855 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
NANOGP3-201ENST00000605855 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
NANOGP3-201ENST00000605855 ADRA2BP18089 450 aa12.45□□□□□ -0.42
NANOGP3-201ENST00000605855 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
NANOGP3-201ENST00000605855 MSH5O43196 834 aa11.91□□□□□ -0.5
NANOGP3-201ENST00000605855 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
NANOGP3-201ENST00000605855 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
NANOGP3-201ENST00000605855 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
NANOGP3-201ENST00000605855 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
NANOGP3-201ENST00000605855 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
NANOGP3-201ENST00000605855 DMRT2Q9Y5R5 561 aa11.12□□□□□ -0.63
NANOGP3-201ENST00000605855 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
NANOGP3-201ENST00000605855 KCNA4P22459 653 aa10.98□□□□□ -0.65
NANOGP3-201ENST00000605855 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
NANOGP3-201ENST00000605855 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
NANOGP3-201ENST00000605855 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
NANOGP3-201ENST00000605855 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
NANOGP3-201ENST00000605855 HOXD11P31277 338 aaPredicted RBP10.84□□□□□ -0.67
NANOGP3-201ENST00000605855 MYO15BQ96JP2 1530 aa10.81□□□□□ -0.68
NANOGP3-201ENST00000605855 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
NANOGP3-201ENST00000605855 DCAF8L1A6NGE4 600 aa10.61□□□□□ -0.71
NANOGP3-201ENST00000605855 NACADO15069 1562 aa10.59□□□□□ -0.71
NANOGP3-201ENST00000605855 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
NANOGP3-201ENST00000605855 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
NANOGP3-201ENST00000605855 ABCC9O60706 1549 aa10.41□□□□□ -0.74
NANOGP3-201ENST00000605855 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
NANOGP3-201ENST00000605855 SLC4A1APQ9BWU0 796 aaKnown RBP10.35□□□□□ -0.75
NANOGP3-201ENST00000605855 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
NANOGP3-201ENST00000605855 RNF39Q9H2S5 420 aa10.29□□□□□ -0.76
NANOGP3-201ENST00000605855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.27□□□□□ -0.77
NANOGP3-201ENST00000605855 SHROOM4Q9ULL8 1493 aa10.25□□□□□ -0.77
NANOGP3-201ENST00000605855 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
NANOGP3-201ENST00000605855 ZBTB22O15209 634 aa10.16□□□□□ -0.78
NANOGP3-201ENST00000605855 SCRIBQ14160 1630 aa10.15□□□□□ -0.78
NANOGP3-201ENST00000605855 C1QBPQ07021 282 aaKnown RBP10.08□□□□□ -0.8
NANOGP3-201ENST00000605855 CACNB1Q02641 598 aaPredicted RBP10.07□□□□□ -0.8
NANOGP3-201ENST00000605855 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
NANOGP3-201ENST00000605855 BAZ1AQ9NRL2 1556 aaPredicted RBP10.03□□□□□ -0.8
NANOGP3-201ENST00000605855 UNC13AQ9UPW8 1703 aa10.01□□□□□ -0.81
NANOGP3-201ENST00000605855 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
NANOGP3-201ENST00000605855 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
NANOGP3-201ENST00000605855 BICRAQ9NZM4 1560 aa9.97□□□□□ -0.81
NANOGP3-201ENST00000605855 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
NANOGP3-201ENST00000605855 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
NANOGP3-201ENST00000605855 EHMT2Q96KQ7 1210 aa9.95□□□□□ -0.82
NANOGP3-201ENST00000605855 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
NANOGP3-201ENST00000605855 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
NANOGP3-201ENST00000605855 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
NANOGP3-201ENST00000605855 ATF5Q9Y2D1 282 aaPredicted RBP9.87□□□□□ -0.83
NANOGP3-201ENST00000605855 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
NANOGP3-201ENST00000605855 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
NANOGP3-201ENST00000605855 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
NANOGP3-201ENST00000605855 CAPN15O75808 1086 aa9.83□□□□□ -0.84
NANOGP3-201ENST00000605855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
NANOGP3-201ENST00000605855 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
NANOGP3-201ENST00000605855 SAMD1Q6SPF0 538 aaPredicted RBP9.82□□□□□ -0.84
NANOGP3-201ENST00000605855 TOP2AP11388 1531 aaKnown RBP9.79□□□□□ -0.84
NANOGP3-201ENST00000605855 TRHP20396 242 aaPredicted RBP9.78□□□□□ -0.84
NANOGP3-201ENST00000605855 DSG3P32926 999 aa9.76□□□□□ -0.85
NANOGP3-201ENST00000605855 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
NANOGP3-201ENST00000605855 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
NANOGP3-201ENST00000605855 HMGXB3Q12766 1538 aa9.74□□□□□ -0.85
NANOGP3-201ENST00000605855 ATAD2BQ9ULI0 1458 aa9.73□□□□□ -0.85
NANOGP3-201ENST00000605855 EIF4G1Q04637 1599 aaKnown RBP9.72□□□□□ -0.85
NANOGP3-201ENST00000605855 WIZO95785 1651 aa9.71□□□□□ -0.85
NANOGP3-201ENST00000605855 ABCB7O75027 752 aa9.71□□□□□ -0.86
NANOGP3-201ENST00000605855 APLP2Q06481 763 aa9.7□□□□□ -0.86
NANOGP3-201ENST00000605855 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
NANOGP3-201ENST00000605855 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
NANOGP3-201ENST00000605855 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
NANOGP3-201ENST00000605855 CCDC88BA6NC98 1476 aa9.61□□□□□ -0.87
NANOGP3-201ENST00000605855 POLA2Q14181 598 aa9.61□□□□□ -0.87
NANOGP3-201ENST00000605855 CC2D2AQ9P2K1 1620 aa9.51□□□□□ -0.89
NANOGP3-201ENST00000605855 EEA1Q15075 1411 aa9.5□□□□□ -0.89
NANOGP3-201ENST00000605855 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
NANOGP3-201ENST00000605855 CFTRP13569 1480 aa9.5□□□□□ -0.89
NANOGP3-201ENST00000605855 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
NANOGP3-201ENST00000605855 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
NANOGP3-201ENST00000605855 WRNQ14191 1432 aaPredicted RBP eCLIP9.42□□□□□ -0.9
NANOGP3-201ENST00000605855 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
NANOGP3-201ENST00000605855 ABCC8Q09428 1581 aa9.41□□□□□ -0.9
NANOGP3-201ENST00000605855 LAMC3Q9Y6N6 1575 aa9.41□□□□□ -0.9
NANOGP3-201ENST00000605855 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
NANOGP3-201ENST00000605855 PDS5BQ9NTI5 1447 aa9.35□□□□□ -0.91
NANOGP3-201ENST00000605855 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
NANOGP3-201ENST00000605855 OSCARQ8IYS5 282 aa9.3□□□□□ -0.92
NANOGP3-201ENST00000605855 ZBTB12Q9Y330 459 aaPredicted RBP9.29□□□□□ -0.92
NANOGP3-201ENST00000605855 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
NANOGP3-201ENST00000605855 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
NANOGP3-201ENST00000605855 CEP164Q9UPV0 1460 aa9.25□□□□□ -0.93
NANOGP3-201ENST00000605855 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
NANOGP3-201ENST00000605855 KIF27Q86VH2 1401 aa9.24□□□□□ -0.93
NANOGP3-201ENST00000605855 FBLN2P98095 1184 aa9.24□□□□□ -0.93
NANOGP3-201ENST00000605855 CUX1P39880 1505 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms