RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
MMP28-201ENST00000605424 CTTNBP2Q8WZ74 1663 aa30.01■■■□□ 2.39
MMP28-201ENST00000605424 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
MMP28-201ENST00000605424 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
MMP28-201ENST00000605424 KANK4Q5T7N3 995 aaPredicted RBP29.97■■■□□ 2.39
MMP28-201ENST00000605424 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
MMP28-201ENST00000605424 TIAM1Q13009 1591 aa29.91■■■□□ 2.38
MMP28-201ENST00000605424 RRBP1Q9P2E9 1410 aaKnown RBP29.9■■■□□ 2.38
MMP28-201ENST00000605424 HNRNPUL2Q1KMD3 747 aaKnown RBP29.9■■■□□ 2.38
MMP28-201ENST00000605424 AQRO60306 1485 aaKnown RBP eCLIP29.88■■■□□ 2.37
MMP28-201ENST00000605424 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
MMP28-201ENST00000605424 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
MMP28-201ENST00000605424 CFAP43Q8NDM7 1665 aa29.79■■■□□ 2.36
MMP28-201ENST00000605424 PCF11O94913 1555 aaKnown RBP29.78■■■□□ 2.36
MMP28-201ENST00000605424 LRRC9Q6ZRR7 1453 aa29.78■■■□□ 2.36
MMP28-201ENST00000605424 FHOD3Q2V2M9 1422 aa29.77■■■□□ 2.36
MMP28-201ENST00000605424 CASKIN1Q8WXD9 1431 aa29.77■■■□□ 2.36
MMP28-201ENST00000605424 EIF4G3O43432 1585 aaKnown RBP29.76■■■□□ 2.36
MMP28-201ENST00000605424 FMN1Q68DA7 1419 aa29.76■■■□□ 2.35
MMP28-201ENST00000605424 SAMD9Q5K651 1589 aa29.75■■■□□ 2.35
MMP28-201ENST00000605424 CCNB3Q8WWL7 1395 aa29.74■■■□□ 2.35
MMP28-201ENST00000605424 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
MMP28-201ENST00000605424 P3H3Q8IVL6 736 aa29.71■■■□□ 2.35
MMP28-201ENST00000605424 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
MMP28-201ENST00000605424 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
MMP28-201ENST00000605424 CLSPNQ9HAW4 1339 aa29.61■■■□□ 2.33
MMP28-201ENST00000605424 IQGAP2Q13576 1575 aa29.54■■■□□ 2.32
MMP28-201ENST00000605424 ATP1B4Q9UN42 357 aaPredicted RBP29.53■■■□□ 2.32
MMP28-201ENST00000605424 PHLDB1Q86UU1 1377 aa29.52■■■□□ 2.32
MMP28-201ENST00000605424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.47■■■□□ 2.31
MMP28-201ENST00000605424 DHX57Q6P158 1386 aaKnown RBP29.46■■■□□ 2.31
MMP28-201ENST00000605424 UGGT2Q9NYU1 1516 aa29.43■■■□□ 2.3
MMP28-201ENST00000605424 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
MMP28-201ENST00000605424 KIAA0586Q9BVV6 1533 aa29.39■■■□□ 2.3
MMP28-201ENST00000605424 CCDC18Q5T9S5 1454 aa29.38■■■□□ 2.29
MMP28-201ENST00000605424 MTUS2Q5JR59 1369 aa29.38■■■□□ 2.29
MMP28-201ENST00000605424 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
MMP28-201ENST00000605424 FBLN2P98095 1184 aa29.35■■■□□ 2.29
MMP28-201ENST00000605424 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
MMP28-201ENST00000605424 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
MMP28-201ENST00000605424 HECW1Q76N89 1606 aa29.34■■■□□ 2.29
MMP28-201ENST00000605424 EHBP1L1Q8N3D4 1523 aa29.33■■■□□ 2.29
MMP28-201ENST00000605424 CHMP7Q8WUX9 453 aaPredicted RBP29.32■■■□□ 2.28
MMP28-201ENST00000605424 ITGAEP38570 1179 aa29.3■■■□□ 2.28
MMP28-201ENST00000605424 SETD5Q9C0A6 1442 aa29.3■■■□□ 2.28
MMP28-201ENST00000605424 FAM50AQ14320 339 aaKnown RBP29.3■■■□□ 2.28
MMP28-201ENST00000605424 ZNF316A6NFI3 1004 aaPredicted RBP29.28■■■□□ 2.28
MMP28-201ENST00000605424 FGD6Q6ZV73 1430 aa29.28■■■□□ 2.28
MMP28-201ENST00000605424 RAB3GAP2Q9H2M9 1393 aa29.28■■■□□ 2.28
MMP28-201ENST00000605424 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
MMP28-201ENST00000605424 CHD1O14646 1710 aa29.27■■■□□ 2.28
MMP28-201ENST00000605424 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
MMP28-201ENST00000605424 KIAA0556O60303 1618 aa29.22■■■□□ 2.27
MMP28-201ENST00000605424 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
MMP28-201ENST00000605424 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.27
MMP28-201ENST00000605424 DIEXFQ68CQ4 756 aaKnown RBP29.2■■■□□ 2.27
MMP28-201ENST00000605424 EPRSP07814 1512 aaKnown RBP29.2■■■□□ 2.26
MMP28-201ENST00000605424 DISP1Q96F81 1524 aa29.2■■■□□ 2.26
MMP28-201ENST00000605424 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
MMP28-201ENST00000605424 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
MMP28-201ENST00000605424 NUP160Q12769 1436 aa29.11■■■□□ 2.25
MMP28-201ENST00000605424 MAPKBP1O60336 1514 aa29.06■■■□□ 2.24
MMP28-201ENST00000605424 PTPN23Q9H3S7 1636 aa29.04■■■□□ 2.24
MMP28-201ENST00000605424 RAPGEF6Q8TEU7 1601 aa29.04■■■□□ 2.24
MMP28-201ENST00000605424 TCOF1Q13428 1488 aaKnown RBP29.04■■■□□ 2.24
MMP28-201ENST00000605424 CDK13Q14004 1512 aaKnown RBP29.03■■■□□ 2.24
MMP28-201ENST00000605424 MIA2Q96PC5 1412 aa29.01■■■□□ 2.24
MMP28-201ENST00000605424 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
MMP28-201ENST00000605424 CARMIL2Q6F5E8 1435 aa29.01■■■□□ 2.23
MMP28-201ENST00000605424 OSCARQ8IYS5 282 aa29■■■□□ 2.23
MMP28-201ENST00000605424 NUP153P49790 1475 aaKnown RBP28.99■■■□□ 2.23
MMP28-201ENST00000605424 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
MMP28-201ENST00000605424 CDK11AQ9UQ88 783 aaPredicted RBP28.95■■■□□ 2.23
MMP28-201ENST00000605424 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
MMP28-201ENST00000605424 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
MMP28-201ENST00000605424 TIMELESSQ9UNS1 1208 aa28.91■■■□□ 2.22
MMP28-201ENST00000605424 NAIPQ13075 1403 aa28.88■■■□□ 2.21
MMP28-201ENST00000605424 AKNAQ7Z591 1439 aa28.87■■■□□ 2.21
MMP28-201ENST00000605424 UACAQ9BZF9 1416 aa28.85■■■□□ 2.21
MMP28-201ENST00000605424 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
MMP28-201ENST00000605424 PLB1Q6P1J6 1458 aa28.8■■■□□ 2.2
MMP28-201ENST00000605424 GCC2Q8IWJ2 1684 aa28.79■■■□□ 2.2
MMP28-201ENST00000605424 SHROOM2Q13796 1616 aa28.79■■■□□ 2.2
MMP28-201ENST00000605424 ARID3CA6NKF2 412 aa28.78■■■□□ 2.2
MMP28-201ENST00000605424 ERCC6L2Q5T890 1561 aa28.77■■■□□ 2.2
MMP28-201ENST00000605424 ACIN1Q9UKV3 1341 aaKnown RBP28.77■■■□□ 2.2
MMP28-201ENST00000605424 ABCA8O94911 1581 aa28.76■■■□□ 2.19
MMP28-201ENST00000605424 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
MMP28-201ENST00000605424 PRG4Q92954 1404 aaPredicted RBP28.74■■■□□ 2.19
MMP28-201ENST00000605424 ROCK1Q13464 1354 aa28.7■■■□□ 2.18
MMP28-201ENST00000605424 ITSN2Q9NZM3 1697 aa28.7■■■□□ 2.18
MMP28-201ENST00000605424 SIN3AQ96ST3 1273 aa28.69■■■□□ 2.18
MMP28-201ENST00000605424 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
MMP28-201ENST00000605424 DAPK1P53355 1430 aa28.66■■■□□ 2.18
MMP28-201ENST00000605424 NEUROD1Q13562 356 aa28.65■■■□□ 2.18
MMP28-201ENST00000605424 RRP7BPQ9NSQ0 103 aa28.63■■■□□ 2.17
MMP28-201ENST00000605424 CHIC2Q9UKJ5 165 aa28.62■■■□□ 2.17
MMP28-201ENST00000605424 ABCC5O15440 1437 aa28.61■■■□□ 2.17
MMP28-201ENST00000605424 GPATCH8Q9UKJ3 1502 aaKnown RBP28.61■■■□□ 2.17
MMP28-201ENST00000605424 ATP10BO94823 1461 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms