RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 KIF13AQ9H1H9 1805 aa35■■■■□ 3.19
GRAMD1A-214ENST00000603907 JPH4Q96JJ6 628 aa34.95■■■■□ 3.19
GRAMD1A-214ENST00000603907 RUSC2Q8N2Y8 1516 aa34.87■■■■□ 3.17
GRAMD1A-214ENST00000603907 IGF1RP08069 1367 aa34.87■■■■□ 3.17
GRAMD1A-214ENST00000603907 NPM1P06748 294 aaKnown RBP eCLIP34.81■■■■□ 3.16
GRAMD1A-214ENST00000603907 EEA1Q15075 1411 aa34.78■■■■□ 3.16
GRAMD1A-214ENST00000603907 ABCC10Q5T3U5 1492 aa34.76■■■■□ 3.15
GRAMD1A-214ENST00000603907 CUL7Q14999 1698 aa34.76■■■■□ 3.15
GRAMD1A-214ENST00000603907 FAM69CQ0P6D2 419 aa34.75■■■■□ 3.15
GRAMD1A-214ENST00000603907 MAPKBP1O60336 1514 aa34.74■■■■□ 3.15
GRAMD1A-214ENST00000603907 ADCY10Q96PN6 1610 aa34.68■■■■□ 3.14
GRAMD1A-214ENST00000603907 DIP2BQ9P265 1576 aa34.67■■■■□ 3.14
GRAMD1A-214ENST00000603907 CARMIL1Q5VZK9 1371 aa34.67■■■■□ 3.14
GRAMD1A-214ENST00000603907 KIAA0586Q9BVV6 1533 aa34.65■■■■□ 3.14
GRAMD1A-214ENST00000603907 CSRNP3Q8WYN3 585 aa34.59■■■■□ 3.13
GRAMD1A-214ENST00000603907 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
GRAMD1A-214ENST00000603907 KDM6BO15054 1643 aa34.52■■■■□ 3.12
GRAMD1A-214ENST00000603907 PRXQ9BXM0 1461 aa34.52■■■■□ 3.12
GRAMD1A-214ENST00000603907 TSPOAP1O95153 1857 aa34.48■■■■□ 3.11
GRAMD1A-214ENST00000603907 FAM9AQ8IZU1 332 aaPredicted RBP34.45■■■■□ 3.11
GRAMD1A-214ENST00000603907 PTPRGP23470 1445 aa34.42■■■■□ 3.1
GRAMD1A-214ENST00000603907 CARMIL2Q6F5E8 1435 aa34.37■■■■□ 3.09
GRAMD1A-214ENST00000603907 TTBK1Q5TCY1 1321 aaPredicted RBP34.32■■■■□ 3.09
GRAMD1A-214ENST00000603907 TNIKQ9UKE5 1360 aa34.32■■■■□ 3.08
GRAMD1A-214ENST00000603907 ABCC2Q92887 1545 aa34.3■■■■□ 3.08
GRAMD1A-214ENST00000603907 KIF21BO75037 1637 aa34.3■■■■□ 3.08
GRAMD1A-214ENST00000603907 KDM4FA0A1W2PPD8 638 aa34.29■■■■□ 3.08
GRAMD1A-214ENST00000603907 IQGAP2Q13576 1575 aa34.28■■■■□ 3.08
GRAMD1A-214ENST00000603907 PLB1Q6P1J6 1458 aa34.24■■■■□ 3.07
GRAMD1A-214ENST00000603907 ASXL2Q76L83 1435 aa34.21■■■■□ 3.07
GRAMD1A-214ENST00000603907 GLI2P10070 1586 aa34.2■■■■□ 3.07
GRAMD1A-214ENST00000603907 UHRF1BP1LA0JNW5 1464 aa34.19■■■■□ 3.06
GRAMD1A-214ENST00000603907 PPRC1Q5VV67 1664 aaKnown RBP34.15■■■■□ 3.06
GRAMD1A-214ENST00000603907 GOLGA3Q08378 1498 aa34.14■■■■□ 3.06
GRAMD1A-214ENST00000603907 UACAQ9BZF9 1416 aa34.14■■■■□ 3.06
GRAMD1A-214ENST00000603907 CTTNBP2Q8WZ74 1663 aa34.12■■■■□ 3.05
GRAMD1A-214ENST00000603907 DISP1Q96F81 1524 aa34.09■■■■□ 3.05
GRAMD1A-214ENST00000603907 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
GRAMD1A-214ENST00000603907 UGGT2Q9NYU1 1516 aa34.02■■■■□ 3.04
GRAMD1A-214ENST00000603907 EPRSP07814 1512 aaKnown RBP34■■■■□ 3.03
GRAMD1A-214ENST00000603907 MAP3K4Q9Y6R4 1608 aa34■■■■□ 3.03
GRAMD1A-214ENST00000603907 ZCCHC11Q5TAX3 1644 aaKnown RBP33.98■■■■□ 3.03
GRAMD1A-214ENST00000603907 UBTFP17480 764 aaKnown RBP33.98■■■■□ 3.03
GRAMD1A-214ENST00000603907 TEX14Q8IWB6 1497 aa33.98■■■■□ 3.03
GRAMD1A-214ENST00000603907 ADGRL1O94910 1474 aa33.96■■■■□ 3.03
GRAMD1A-214ENST00000603907 KIAA0556O60303 1618 aa33.95■■■■□ 3.03
GRAMD1A-214ENST00000603907 COL17A1Q9UMD9 1497 aaPredicted RBP33.89■■■■□ 3.02
GRAMD1A-214ENST00000603907 EHMT2Q96KQ7 1210 aa33.89■■■■□ 3.02
GRAMD1A-214ENST00000603907 WDR7Q9Y4E6 1490 aa33.82■■■■□ 3.01
GRAMD1A-214ENST00000603907 SAMD9Q5K651 1589 aa33.74■■■□□ 2.99
GRAMD1A-214ENST00000603907 ILDR1Q86SU0 546 aaPredicted RBP33.73■■■□□ 2.99
GRAMD1A-214ENST00000603907 EFCAB5A4FU69 1503 aa33.73■■■□□ 2.99
GRAMD1A-214ENST00000603907 CFAP43Q8NDM7 1665 aa33.71■■■□□ 2.99
GRAMD1A-214ENST00000603907 CD109Q6YHK3 1445 aa33.67■■■□□ 2.98
GRAMD1A-214ENST00000603907 ABCA8O94911 1581 aa33.66■■■□□ 2.98
GRAMD1A-214ENST00000603907 MAGI3Q5TCQ9 1506 aa33.66■■■□□ 2.98
GRAMD1A-214ENST00000603907 HECW2Q9P2P5 1572 aa33.65■■■□□ 2.98
GRAMD1A-214ENST00000603907 LOC105371045A0A1W2PR82 267 aa33.63■■■□□ 2.97
GRAMD1A-214ENST00000603907 RANGAP1P46060 587 aaPredicted RBP33.63■■■□□ 2.97
GRAMD1A-214ENST00000603907 KCNH8Q96L42 1107 aa33.62■■■□□ 2.97
GRAMD1A-214ENST00000603907 P3H3Q8IVL6 736 aa33.57■■■□□ 2.96
GRAMD1A-214ENST00000603907 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
GRAMD1A-214ENST00000603907 FHOD3Q2V2M9 1422 aa33.53■■■□□ 2.96
GRAMD1A-214ENST00000603907 CLIP1P30622 1438 aa33.52■■■□□ 2.96
GRAMD1A-214ENST00000603907 CEP162Q5TB80 1403 aa33.46■■■□□ 2.95
GRAMD1A-214ENST00000603907 FMN1Q68DA7 1419 aa33.42■■■□□ 2.94
GRAMD1A-214ENST00000603907 ARAP3Q8WWN8 1544 aa33.42■■■□□ 2.94
GRAMD1A-214ENST00000603907 ATP10BO94823 1461 aa33.36■■■□□ 2.93
GRAMD1A-214ENST00000603907 ARID3CA6NKF2 412 aa33.35■■■□□ 2.93
GRAMD1A-214ENST00000603907 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
GRAMD1A-214ENST00000603907 ABCA9Q8IUA7 1624 aa33.33■■■□□ 2.93
GRAMD1A-214ENST00000603907 RAPGEF6Q8TEU7 1601 aa33.32■■■□□ 2.92
GRAMD1A-214ENST00000603907 NEO1Q92859 1461 aa33.22■■■□□ 2.91
GRAMD1A-214ENST00000603907 NUP153P49790 1475 aaKnown RBP33.2■■■□□ 2.91
GRAMD1A-214ENST00000603907 ADAMTSL3P82987 1691 aa33.2■■■□□ 2.9
GRAMD1A-214ENST00000603907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.18■■■□□ 2.9
GRAMD1A-214ENST00000603907 HNRNPUL2Q1KMD3 747 aaKnown RBP33.18■■■□□ 2.9
GRAMD1A-214ENST00000603907 CASKIN1Q8WXD9 1431 aa33.18■■■□□ 2.9
GRAMD1A-214ENST00000603907 PTPRMP28827 1452 aa33.17■■■□□ 2.9
GRAMD1A-214ENST00000603907 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
GRAMD1A-214ENST00000603907 RAPGEF3O95398 923 aa33.16■■■□□ 2.9
GRAMD1A-214ENST00000603907 FYCO1Q9BQS8 1478 aa33.12■■■□□ 2.89
GRAMD1A-214ENST00000603907 BCORL1Q5H9F3 1711 aa33.1■■■□□ 2.89
GRAMD1A-214ENST00000603907 PCF11O94913 1555 aaKnown RBP33.09■■■□□ 2.89
GRAMD1A-214ENST00000603907 FRMPD1Q5SYB0 1578 aa33.09■■■□□ 2.89
GRAMD1A-214ENST00000603907 ARID4BQ4LE39 1312 aaPredicted RBP33.06■■■□□ 2.88
GRAMD1A-214ENST00000603907 VPS8Q8N3P4 1428 aa33.06■■■□□ 2.88
GRAMD1A-214ENST00000603907 ATP1B4Q9UN42 357 aaPredicted RBP33.06■■■□□ 2.88
GRAMD1A-214ENST00000603907 FBXO41Q8TF61 875 aa33.04■■■□□ 2.88
GRAMD1A-214ENST00000603907 CCDC18Q5T9S5 1454 aa33.03■■■□□ 2.88
GRAMD1A-214ENST00000603907 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
GRAMD1A-214ENST00000603907 ARHGEF40Q8TER5 1519 aa32.98■■■□□ 2.87
GRAMD1A-214ENST00000603907 PLEKHD1A6NEE1 506 aa32.98■■■□□ 2.87
GRAMD1A-214ENST00000603907 CFAP74Q9C0B2 1584 aa32.98■■■□□ 2.87
GRAMD1A-214ENST00000603907 DENND4BO75064 1496 aaPredicted RBP32.98■■■□□ 2.87
GRAMD1A-214ENST00000603907 CDK13Q14004 1512 aaKnown RBP32.97■■■□□ 2.87
GRAMD1A-214ENST00000603907 RICTORQ6R327 1708 aa32.96■■■□□ 2.87
GRAMD1A-214ENST00000603907 CDK11AQ9UQ88 783 aaPredicted RBP32.95■■■□□ 2.87
GRAMD1A-214ENST00000603907 AKNAQ7Z591 1439 aa32.93■■■□□ 2.86
GRAMD1A-214ENST00000603907 RIMS1Q86UR5 1692 aaKnown RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms