RNA–Protein interactions for RNA: ENST00000601806.5

PRKD2-216, Transcript of protein kinase D2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD2, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-216ENST00000601806 P3H3Q8IVL6 736 aa24.21■■□□□ 1.47
PRKD2-216ENST00000601806 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.474e-7■■■■□ 22.4
PRKD2-216ENST00000601806 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
PRKD2-216ENST00000601806 RRBP1Q9P2E9 1410 aaKnown RBP24.16■■□□□ 1.46
PRKD2-216ENST00000601806 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
PRKD2-216ENST00000601806 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
PRKD2-216ENST00000601806 TIAM1Q13009 1591 aa24.14■■□□□ 1.45
PRKD2-216ENST00000601806 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
PRKD2-216ENST00000601806 MAP3K1Q13233 1512 aa24.13■■□□□ 1.45
PRKD2-216ENST00000601806 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
PRKD2-216ENST00000601806 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
PRKD2-216ENST00000601806 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
PRKD2-216ENST00000601806 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
PRKD2-216ENST00000601806 EFCAB5A4FU69 1503 aa24.09■■□□□ 1.45
PRKD2-216ENST00000601806 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
PRKD2-216ENST00000601806 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
PRKD2-216ENST00000601806 PCF11O94913 1555 aaKnown RBP24.06■■□□□ 1.44
PRKD2-216ENST00000601806 LRRC9Q6ZRR7 1453 aa24.05■■□□□ 1.44
PRKD2-216ENST00000601806 ITGAEP38570 1179 aa24.02■■□□□ 1.44
PRKD2-216ENST00000601806 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
PRKD2-216ENST00000601806 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
PRKD2-216ENST00000601806 CFAP43Q8NDM7 1665 aa23.98■■□□□ 1.43
PRKD2-216ENST00000601806 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
PRKD2-216ENST00000601806 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
PRKD2-216ENST00000601806 FMN1Q68DA7 1419 aa23.96■■□□□ 1.43
PRKD2-216ENST00000601806 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
PRKD2-216ENST00000601806 DHX57Q6P158 1386 aaKnown RBP23.95■■□□□ 1.42
PRKD2-216ENST00000601806 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
PRKD2-216ENST00000601806 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
PRKD2-216ENST00000601806 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
PRKD2-216ENST00000601806 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
PRKD2-216ENST00000601806 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
PRKD2-216ENST00000601806 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
PRKD2-216ENST00000601806 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
PRKD2-216ENST00000601806 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
PRKD2-216ENST00000601806 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
PRKD2-216ENST00000601806 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
PRKD2-216ENST00000601806 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
PRKD2-216ENST00000601806 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
PRKD2-216ENST00000601806 FBLN2P98095 1184 aa23.75■■□□□ 1.39
PRKD2-216ENST00000601806 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
PRKD2-216ENST00000601806 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
PRKD2-216ENST00000601806 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
PRKD2-216ENST00000601806 UGGT2Q9NYU1 1516 aa23.71■■□□□ 1.39
PRKD2-216ENST00000601806 LRRIQ1Q96JM4 1722 aa23.69■■□□□ 1.38
PRKD2-216ENST00000601806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.38
PRKD2-216ENST00000601806 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
PRKD2-216ENST00000601806 CEP170Q5SW79 1584 aa23.64■■□□□ 1.38
PRKD2-216ENST00000601806 DISP1Q96F81 1524 aa23.62■■□□□ 1.37
PRKD2-216ENST00000601806 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
PRKD2-216ENST00000601806 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
PRKD2-216ENST00000601806 EHBP1L1Q8N3D4 1523 aa23.61■■□□□ 1.37
PRKD2-216ENST00000601806 KIAA0556O60303 1618 aa23.6■■□□□ 1.37
PRKD2-216ENST00000601806 SUPT6HQ7KZ85 1726 aaKnown RBP23.6■■□□□ 1.37
PRKD2-216ENST00000601806 HECW1Q76N89 1606 aa23.6■■□□□ 1.37
PRKD2-216ENST00000601806 NUP160Q12769 1436 aa23.58■■□□□ 1.36
PRKD2-216ENST00000601806 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
PRKD2-216ENST00000601806 MAPKBP1O60336 1514 aa23.58■■□□□ 1.36
PRKD2-216ENST00000601806 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
PRKD2-216ENST00000601806 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
PRKD2-216ENST00000601806 EPRSP07814 1512 aaKnown RBP23.53■■□□□ 1.36
PRKD2-216ENST00000601806 MAGI3Q5TCQ9 1506 aa23.53■■□□□ 1.36
PRKD2-216ENST00000601806 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
PRKD2-216ENST00000601806 MIER1Q8N108 512 aa23.48■■□□□ 1.35
PRKD2-216ENST00000601806 CENPBP07199 599 aaPredicted RBP23.48■■□□□ 1.35
PRKD2-216ENST00000601806 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
PRKD2-216ENST00000601806 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
PRKD2-216ENST00000601806 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
PRKD2-216ENST00000601806 PTPN23Q9H3S7 1636 aa23.46■■□□□ 1.35
PRKD2-216ENST00000601806 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
PRKD2-216ENST00000601806 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
PRKD2-216ENST00000601806 CARMIL2Q6F5E8 1435 aa23.44■■□□□ 1.34
PRKD2-216ENST00000601806 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
PRKD2-216ENST00000601806 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
PRKD2-216ENST00000601806 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
PRKD2-216ENST00000601806 NUP153P49790 1475 aaKnown RBP23.41■■□□□ 1.34
PRKD2-216ENST00000601806 CHD1O14646 1710 aa23.39■■□□□ 1.34
PRKD2-216ENST00000601806 PLB1Q6P1J6 1458 aa23.38■■□□□ 1.33
PRKD2-216ENST00000601806 NAIPQ13075 1403 aa23.37■■□□□ 1.33
PRKD2-216ENST00000601806 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
PRKD2-216ENST00000601806 YTHDC1Q96MU7 727 aaKnown RBP23.35■■□□□ 1.33
PRKD2-216ENST00000601806 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
PRKD2-216ENST00000601806 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
PRKD2-216ENST00000601806 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
PRKD2-216ENST00000601806 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
PRKD2-216ENST00000601806 CDK11AQ9UQ88 783 aaPredicted RBP23.34■■□□□ 1.33
PRKD2-216ENST00000601806 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
PRKD2-216ENST00000601806 PRG4Q92954 1404 aaPredicted RBP23.31■■□□□ 1.32
PRKD2-216ENST00000601806 ABCA8O94911 1581 aa23.22■■□□□ 1.31
PRKD2-216ENST00000601806 TONSLQ96HA7 1378 aa23.22■■□□□ 1.31
PRKD2-216ENST00000601806 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
PRKD2-216ENST00000601806 PTPRGP23470 1445 aa23.21■■□□□ 1.31
PRKD2-216ENST00000601806 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
PRKD2-216ENST00000601806 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
PRKD2-216ENST00000601806 AKNAQ7Z591 1439 aa23.2■■□□□ 1.3
PRKD2-216ENST00000601806 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
PRKD2-216ENST00000601806 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
PRKD2-216ENST00000601806 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
PRKD2-216ENST00000601806 DAPK1P53355 1430 aa23.16■■□□□ 1.3
PRKD2-216ENST00000601806 ATP10BO94823 1461 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms