RNA–Protein interactions for RNA: ENST00000601806.5

PRKD2-216, Transcript of protein kinase D2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD2, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-216ENST00000601806 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
PRKD2-216ENST00000601806 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
PRKD2-216ENST00000601806 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
PRKD2-216ENST00000601806 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
PRKD2-216ENST00000601806 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
PRKD2-216ENST00000601806 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
PRKD2-216ENST00000601806 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
PRKD2-216ENST00000601806 ABCC9O60706 1549 aa28.38■■■□□ 2.13
PRKD2-216ENST00000601806 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
PRKD2-216ENST00000601806 NACADO15069 1562 aa27.98■■■□□ 2.07
PRKD2-216ENST00000601806 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
PRKD2-216ENST00000601806 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
PRKD2-216ENST00000601806 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
PRKD2-216ENST00000601806 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
PRKD2-216ENST00000601806 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
PRKD2-216ENST00000601806 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
PRKD2-216ENST00000601806 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
PRKD2-216ENST00000601806 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
PRKD2-216ENST00000601806 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
PRKD2-216ENST00000601806 BAZ1AQ9NRL2 1556 aaPredicted RBP26.83■■□□□ 1.89
PRKD2-216ENST00000601806 WIZO95785 1651 aa26.79■■□□□ 1.88
PRKD2-216ENST00000601806 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
PRKD2-216ENST00000601806 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
PRKD2-216ENST00000601806 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
PRKD2-216ENST00000601806 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
PRKD2-216ENST00000601806 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
PRKD2-216ENST00000601806 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
PRKD2-216ENST00000601806 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
PRKD2-216ENST00000601806 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
PRKD2-216ENST00000601806 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
PRKD2-216ENST00000601806 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
PRKD2-216ENST00000601806 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
PRKD2-216ENST00000601806 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
PRKD2-216ENST00000601806 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
PRKD2-216ENST00000601806 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
PRKD2-216ENST00000601806 NCAPD3P42695 1498 aa25.87■■□□□ 1.73
PRKD2-216ENST00000601806 HRCP23327 699 aa25.81■■□□□ 1.72
PRKD2-216ENST00000601806 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
PRKD2-216ENST00000601806 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
PRKD2-216ENST00000601806 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
PRKD2-216ENST00000601806 SOGA1O94964 1423 aa25.62■■□□□ 1.69
PRKD2-216ENST00000601806 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
PRKD2-216ENST00000601806 EEA1Q15075 1411 aa25.54■■□□□ 1.68
PRKD2-216ENST00000601806 CSRNP3Q8WYN3 585 aa25.5■■□□□ 1.67
PRKD2-216ENST00000601806 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
PRKD2-216ENST00000601806 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
PRKD2-216ENST00000601806 CFTRP13569 1480 aa25.41■■□□□ 1.66
PRKD2-216ENST00000601806 UBTFP17480 764 aaKnown RBP25.36■■□□□ 1.65
PRKD2-216ENST00000601806 TNIKQ9UKE5 1360 aa25.36■■□□□ 1.65
PRKD2-216ENST00000601806 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
PRKD2-216ENST00000601806 CEP162Q5TB80 1403 aa25.33■■□□□ 1.65
PRKD2-216ENST00000601806 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
PRKD2-216ENST00000601806 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
PRKD2-216ENST00000601806 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
PRKD2-216ENST00000601806 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
PRKD2-216ENST00000601806 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
PRKD2-216ENST00000601806 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
PRKD2-216ENST00000601806 CUX1P39880 1505 aa25.18■■□□□ 1.62
PRKD2-216ENST00000601806 KIF21BO75037 1637 aa25.16■■□□□ 1.62
PRKD2-216ENST00000601806 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
PRKD2-216ENST00000601806 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
PRKD2-216ENST00000601806 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
PRKD2-216ENST00000601806 NESP48681 1621 aa25.04■■□□□ 1.6
PRKD2-216ENST00000601806 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
PRKD2-216ENST00000601806 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
PRKD2-216ENST00000601806 CLIP1P30622 1438 aa24.98■■□□□ 1.59
PRKD2-216ENST00000601806 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
PRKD2-216ENST00000601806 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
PRKD2-216ENST00000601806 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
PRKD2-216ENST00000601806 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
PRKD2-216ENST00000601806 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
PRKD2-216ENST00000601806 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
PRKD2-216ENST00000601806 VPS8Q8N3P4 1428 aa24.81■■□□□ 1.56
PRKD2-216ENST00000601806 CUX2O14529 1486 aa24.79■■□□□ 1.56
PRKD2-216ENST00000601806 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
PRKD2-216ENST00000601806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
PRKD2-216ENST00000601806 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
PRKD2-216ENST00000601806 APLP2Q06481 763 aa24.76■■□□□ 1.55
PRKD2-216ENST00000601806 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
PRKD2-216ENST00000601806 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
PRKD2-216ENST00000601806 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
PRKD2-216ENST00000601806 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
PRKD2-216ENST00000601806 IGF1RP08069 1367 aa24.68■■□□□ 1.54
PRKD2-216ENST00000601806 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
PRKD2-216ENST00000601806 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
PRKD2-216ENST00000601806 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
PRKD2-216ENST00000601806 ARAP1Q96P48 1450 aa24.59■■□□□ 1.53
PRKD2-216ENST00000601806 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
PRKD2-216ENST00000601806 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
PRKD2-216ENST00000601806 ARHGAP35Q9NRY4 1499 aa24.47■■□□□ 1.51
PRKD2-216ENST00000601806 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
PRKD2-216ENST00000601806 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
PRKD2-216ENST00000601806 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
PRKD2-216ENST00000601806 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
PRKD2-216ENST00000601806 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
PRKD2-216ENST00000601806 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
PRKD2-216ENST00000601806 CUL7Q14999 1698 aa24.34■■□□□ 1.49
PRKD2-216ENST00000601806 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
PRKD2-216ENST00000601806 ERCC6Q03468 1493 aa24.25■■□□□ 1.47
PRKD2-216ENST00000601806 WDR62O43379 1518 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms