RNA–Protein interactions for RNA: ENST00000600220.5

ZNF544-217, Transcript of zinc finger protein 544, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene ZNF544, Length 2,837 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-217ENST00000600220 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-217ENST00000600220 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
ZNF544-217ENST00000600220 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
ZNF544-217ENST00000600220 MIER1Q8N108 512 aa11.74□□□□□ -0.53
ZNF544-217ENST00000600220 CLIP1P30622 1438 aa11.72□□□□□ -0.53
ZNF544-217ENST00000600220 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
ZNF544-217ENST00000600220 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
ZNF544-217ENST00000600220 CTTNBP2Q8WZ74 1663 aa11.67□□□□□ -0.54
ZNF544-217ENST00000600220 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 GRIN2BQ13224 1484 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
ZNF544-217ENST00000600220 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
ZNF544-217ENST00000600220 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
ZNF544-217ENST00000600220 FHAD1B1AJZ9 1412 aa11.63□□□□□ -0.55
ZNF544-217ENST00000600220 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
ZNF544-217ENST00000600220 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
ZNF544-217ENST00000600220 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
ZNF544-217ENST00000600220 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.556e-7■■■■■ 28.4
ZNF544-217ENST00000600220 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
ZNF544-217ENST00000600220 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
ZNF544-217ENST00000600220 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
ZNF544-217ENST00000600220 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
ZNF544-217ENST00000600220 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
ZNF544-217ENST00000600220 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
ZNF544-217ENST00000600220 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
ZNF544-217ENST00000600220 MAP3K1Q13233 1512 aa11.52□□□□□ -0.56
ZNF544-217ENST00000600220 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 SYNJ2O15056 1496 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 GRIN2AQ12879 1464 aa11.52□□□□□ -0.57
ZNF544-217ENST00000600220 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
ZNF544-217ENST00000600220 UGGT2Q9NYU1 1516 aa11.49□□□□□ -0.57
ZNF544-217ENST00000600220 KIAA0586Q9BVV6 1533 aa11.48□□□□□ -0.57
ZNF544-217ENST00000600220 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
ZNF544-217ENST00000600220 CFAP43Q8NDM7 1665 aa11.47□□□□□ -0.57
ZNF544-217ENST00000600220 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
ZNF544-217ENST00000600220 FMN1Q68DA7 1419 aa11.46□□□□□ -0.57
ZNF544-217ENST00000600220 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.58
ZNF544-217ENST00000600220 NUP160Q12769 1436 aa11.46□□□□□ -0.58
ZNF544-217ENST00000600220 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
ZNF544-217ENST00000600220 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
ZNF544-217ENST00000600220 APLP2Q06481 763 aa11.44□□□□□ -0.58
ZNF544-217ENST00000600220 BCANQ96GW7 911 aa11.41□□□□□ -0.58
ZNF544-217ENST00000600220 KIAA0556O60303 1618 aa11.41□□□□□ -0.58
ZNF544-217ENST00000600220 DISP1Q96F81 1524 aa11.39□□□□□ -0.59
ZNF544-217ENST00000600220 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
ZNF544-217ENST00000600220 LRRC9Q6ZRR7 1453 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 CHD1O14646 1710 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
ZNF544-217ENST00000600220 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
ZNF544-217ENST00000600220 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
ZNF544-217ENST00000600220 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
ZNF544-217ENST00000600220 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
ZNF544-217ENST00000600220 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
ZNF544-217ENST00000600220 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
ZNF544-217ENST00000600220 SHROOM2Q13796 1616 aa11.33□□□□□ -0.6
ZNF544-217ENST00000600220 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
ZNF544-217ENST00000600220 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
ZNF544-217ENST00000600220 FKBP8Q14318 412 aa11.29□□□□□ -0.6
ZNF544-217ENST00000600220 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
ZNF544-217ENST00000600220 EPRSP07814 1512 aaKnown RBP11.28□□□□□ -0.6
ZNF544-217ENST00000600220 FBLN2P98095 1184 aa11.27□□□□□ -0.6
ZNF544-217ENST00000600220 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
ZNF544-217ENST00000600220 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
ZNF544-217ENST00000600220 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
ZNF544-217ENST00000600220 ABCA8O94911 1581 aa11.25□□□□□ -0.61
ZNF544-217ENST00000600220 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
ZNF544-217ENST00000600220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
ZNF544-217ENST00000600220 MAGI3Q5TCQ9 1506 aa11.24□□□□□ -0.61
ZNF544-217ENST00000600220 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
ZNF544-217ENST00000600220 ITGAEP38570 1179 aa11.23□□□□□ -0.61
ZNF544-217ENST00000600220 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
ZNF544-217ENST00000600220 PRG4Q92954 1404 aaPredicted RBP11.22□□□□□ -0.61
ZNF544-217ENST00000600220 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.61
ZNF544-217ENST00000600220 NCOA2Q15596 1464 aa11.21□□□□□ -0.62
ZNF544-217ENST00000600220 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
ZNF544-217ENST00000600220 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
ZNF544-217ENST00000600220 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
ZNF544-217ENST00000600220 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
ZNF544-217ENST00000600220 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
ZNF544-217ENST00000600220 TCOF1Q13428 1488 aaKnown RBP11.16□□□□□ -0.62
ZNF544-217ENST00000600220 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
ZNF544-217ENST00000600220 PTPRGP23470 1445 aa11.16□□□□□ -0.62
ZNF544-217ENST00000600220 NEFLP07196 543 aa11.16□□□□□ -0.62
ZNF544-217ENST00000600220 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
ZNF544-217ENST00000600220 MSH5O43196 834 aa11.15□□□□□ -0.62
ZNF544-217ENST00000600220 MIA2Q96PC5 1412 aa11.15□□□□□ -0.63
ZNF544-217ENST00000600220 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
ZNF544-217ENST00000600220 ERCC6L2Q5T890 1561 aa11.14□□□□□ -0.63
ZNF544-217ENST00000600220 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
ZNF544-217ENST00000600220 UHRF1BP1LA0JNW5 1464 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 UACAQ9BZF9 1416 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 ABCC2Q92887 1545 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 ATP10BO94823 1461 aa11.13□□□□□ -0.63
ZNF544-217ENST00000600220 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms