RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 NUP160Q12769 1436 aa13.31□□□□□ -0.28
GRAMD1A-210ENST00000599476 LMTK3Q96Q04 1460 aa13.31□□□□□ -0.28
GRAMD1A-210ENST00000599476 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-210ENST00000599476 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
GRAMD1A-210ENST00000599476 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
GRAMD1A-210ENST00000599476 CUL7Q14999 1698 aa13.27□□□□□ -0.29
GRAMD1A-210ENST00000599476 EEA1Q15075 1411 aa13.26□□□□□ -0.29
GRAMD1A-210ENST00000599476 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
GRAMD1A-210ENST00000599476 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
GRAMD1A-210ENST00000599476 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
GRAMD1A-210ENST00000599476 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
GRAMD1A-210ENST00000599476 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
GRAMD1A-210ENST00000599476 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
GRAMD1A-210ENST00000599476 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1A-210ENST00000599476 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
GRAMD1A-210ENST00000599476 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
GRAMD1A-210ENST00000599476 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
GRAMD1A-210ENST00000599476 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
GRAMD1A-210ENST00000599476 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
GRAMD1A-210ENST00000599476 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
GRAMD1A-210ENST00000599476 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
GRAMD1A-210ENST00000599476 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
GRAMD1A-210ENST00000599476 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
GRAMD1A-210ENST00000599476 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
GRAMD1A-210ENST00000599476 PTPRGP23470 1445 aa13.05□□□□□ -0.32
GRAMD1A-210ENST00000599476 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
GRAMD1A-210ENST00000599476 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
GRAMD1A-210ENST00000599476 KIF21BO75037 1637 aa13.02□□□□□ -0.32
GRAMD1A-210ENST00000599476 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
GRAMD1A-210ENST00000599476 DISP1Q96F81 1524 aa13□□□□□ -0.33
GRAMD1A-210ENST00000599476 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
GRAMD1A-210ENST00000599476 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
GRAMD1A-210ENST00000599476 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
GRAMD1A-210ENST00000599476 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
GRAMD1A-210ENST00000599476 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
GRAMD1A-210ENST00000599476 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
GRAMD1A-210ENST00000599476 P3H3Q8IVL6 736 aa12.92□□□□□ -0.34
GRAMD1A-210ENST00000599476 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
GRAMD1A-210ENST00000599476 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
GRAMD1A-210ENST00000599476 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
GRAMD1A-210ENST00000599476 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
GRAMD1A-210ENST00000599476 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
GRAMD1A-210ENST00000599476 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
GRAMD1A-210ENST00000599476 FAM69CQ0P6D2 419 aa12.85□□□□□ -0.35
GRAMD1A-210ENST00000599476 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
GRAMD1A-210ENST00000599476 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
GRAMD1A-210ENST00000599476 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
GRAMD1A-210ENST00000599476 CLIP1P30622 1438 aa12.84□□□□□ -0.35
GRAMD1A-210ENST00000599476 EFCAB5A4FU69 1503 aa12.83□□□□□ -0.35
GRAMD1A-210ENST00000599476 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
GRAMD1A-210ENST00000599476 ABCA8O94911 1581 aa12.82□□□□□ -0.36
GRAMD1A-210ENST00000599476 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
GRAMD1A-210ENST00000599476 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
GRAMD1A-210ENST00000599476 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
GRAMD1A-210ENST00000599476 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
GRAMD1A-210ENST00000599476 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
GRAMD1A-210ENST00000599476 FMN1Q68DA7 1419 aa12.77□□□□□ -0.37
GRAMD1A-210ENST00000599476 ATP10BO94823 1461 aa12.77□□□□□ -0.37
GRAMD1A-210ENST00000599476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
GRAMD1A-210ENST00000599476 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
GRAMD1A-210ENST00000599476 KDM6BO15054 1643 aa12.74□□□□□ -0.37
GRAMD1A-210ENST00000599476 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
GRAMD1A-210ENST00000599476 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
GRAMD1A-210ENST00000599476 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
GRAMD1A-210ENST00000599476 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
GRAMD1A-210ENST00000599476 WDR7Q9Y4E6 1490 aa12.73□□□□□ -0.37
GRAMD1A-210ENST00000599476 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
GRAMD1A-210ENST00000599476 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
GRAMD1A-210ENST00000599476 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
GRAMD1A-210ENST00000599476 APLP2Q06481 763 aa12.72□□□□□ -0.37
GRAMD1A-210ENST00000599476 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
GRAMD1A-210ENST00000599476 GLI2P10070 1586 aa12.72□□□□□ -0.37
GRAMD1A-210ENST00000599476 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
GRAMD1A-210ENST00000599476 CDK11AQ9UQ88 783 aaPredicted RBP12.7□□□□□ -0.38
GRAMD1A-210ENST00000599476 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
GRAMD1A-210ENST00000599476 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
GRAMD1A-210ENST00000599476 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
GRAMD1A-210ENST00000599476 TEX14Q8IWB6 1497 aa12.63□□□□□ -0.39
GRAMD1A-210ENST00000599476 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
GRAMD1A-210ENST00000599476 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
GRAMD1A-210ENST00000599476 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
GRAMD1A-210ENST00000599476 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
GRAMD1A-210ENST00000599476 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 PHLDB1Q86UU1 1377 aa12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
GRAMD1A-210ENST00000599476 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
GRAMD1A-210ENST00000599476 TROQ12816 1431 aaPredicted RBP12.56□□□□□ -0.4
GRAMD1A-210ENST00000599476 ABCA9Q8IUA7 1624 aa12.56□□□□□ -0.4
GRAMD1A-210ENST00000599476 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
GRAMD1A-210ENST00000599476 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
GRAMD1A-210ENST00000599476 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
GRAMD1A-210ENST00000599476 NEO1Q92859 1461 aa12.53□□□□□ -0.4
GRAMD1A-210ENST00000599476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.4
GRAMD1A-210ENST00000599476 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.41
GRAMD1A-210ENST00000599476 PLCH2O75038 1416 aa12.52□□□□□ -0.41
GRAMD1A-210ENST00000599476 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
GRAMD1A-210ENST00000599476 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms