RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
GRAMD1A-210ENST00000599476 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
GRAMD1A-210ENST00000599476 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
GRAMD1A-210ENST00000599476 ABCC9O60706 1549 aa16.59■□□□□ 0.25
GRAMD1A-210ENST00000599476 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
GRAMD1A-210ENST00000599476 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
GRAMD1A-210ENST00000599476 NACADO15069 1562 aa15.93■□□□□ 0.14
GRAMD1A-210ENST00000599476 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
GRAMD1A-210ENST00000599476 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
GRAMD1A-210ENST00000599476 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
GRAMD1A-210ENST00000599476 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
GRAMD1A-210ENST00000599476 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.072e-14■■□□□ 11.6
GRAMD1A-210ENST00000599476 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
GRAMD1A-210ENST00000599476 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
GRAMD1A-210ENST00000599476 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
GRAMD1A-210ENST00000599476 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
GRAMD1A-210ENST00000599476 CECR2Q9BXF3 1484 aa15.08■□□□□ 0.01
GRAMD1A-210ENST00000599476 TRIM41Q8WV44 630 aa15.05■□□□□ -0
GRAMD1A-210ENST00000599476 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
GRAMD1A-210ENST00000599476 CC2D2AQ9P2K1 1620 aa14.93□□□□□ -0.02
GRAMD1A-210ENST00000599476 CUX2O14529 1486 aa14.79□□□□□ -0.04
GRAMD1A-210ENST00000599476 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
GRAMD1A-210ENST00000599476 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
GRAMD1A-210ENST00000599476 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
GRAMD1A-210ENST00000599476 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
GRAMD1A-210ENST00000599476 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
GRAMD1A-210ENST00000599476 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
GRAMD1A-210ENST00000599476 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
GRAMD1A-210ENST00000599476 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
GRAMD1A-210ENST00000599476 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
GRAMD1A-210ENST00000599476 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
GRAMD1A-210ENST00000599476 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
GRAMD1A-210ENST00000599476 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
GRAMD1A-210ENST00000599476 WIZO95785 1651 aa14.46□□□□□ -0.1
GRAMD1A-210ENST00000599476 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
GRAMD1A-210ENST00000599476 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
GRAMD1A-210ENST00000599476 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
GRAMD1A-210ENST00000599476 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
GRAMD1A-210ENST00000599476 NESP48681 1621 aa14.3□□□□□ -0.12
GRAMD1A-210ENST00000599476 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
GRAMD1A-210ENST00000599476 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
GRAMD1A-210ENST00000599476 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
GRAMD1A-210ENST00000599476 CFTRP13569 1480 aa14.2□□□□□ -0.14
GRAMD1A-210ENST00000599476 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
GRAMD1A-210ENST00000599476 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
GRAMD1A-210ENST00000599476 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
GRAMD1A-210ENST00000599476 KIF21AQ7Z4S6 1674 aa14.05□□□□□ -0.16
GRAMD1A-210ENST00000599476 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
GRAMD1A-210ENST00000599476 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
GRAMD1A-210ENST00000599476 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
GRAMD1A-210ENST00000599476 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
GRAMD1A-210ENST00000599476 WDR62O43379 1518 aa13.98□□□□□ -0.17
GRAMD1A-210ENST00000599476 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
GRAMD1A-210ENST00000599476 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
GRAMD1A-210ENST00000599476 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
GRAMD1A-210ENST00000599476 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
GRAMD1A-210ENST00000599476 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
GRAMD1A-210ENST00000599476 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
GRAMD1A-210ENST00000599476 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
GRAMD1A-210ENST00000599476 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
GRAMD1A-210ENST00000599476 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
GRAMD1A-210ENST00000599476 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
GRAMD1A-210ENST00000599476 SOGA1O94964 1423 aa13.75□□□□□ -0.21
GRAMD1A-210ENST00000599476 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
GRAMD1A-210ENST00000599476 CUX1P39880 1505 aa13.74□□□□□ -0.21
GRAMD1A-210ENST00000599476 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
GRAMD1A-210ENST00000599476 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
GRAMD1A-210ENST00000599476 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
GRAMD1A-210ENST00000599476 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
GRAMD1A-210ENST00000599476 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
GRAMD1A-210ENST00000599476 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
GRAMD1A-210ENST00000599476 AQRO60306 1485 aaKnown RBP eCLIP13.66□□□□□ -0.227e-7■■■□□ 17.3
GRAMD1A-210ENST00000599476 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
GRAMD1A-210ENST00000599476 TOP2BQ02880 1626 aa13.63□□□□□ -0.23
GRAMD1A-210ENST00000599476 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
GRAMD1A-210ENST00000599476 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
GRAMD1A-210ENST00000599476 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
GRAMD1A-210ENST00000599476 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
GRAMD1A-210ENST00000599476 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
GRAMD1A-210ENST00000599476 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
GRAMD1A-210ENST00000599476 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
GRAMD1A-210ENST00000599476 FBLN2P98095 1184 aa13.54□□□□□ -0.24
GRAMD1A-210ENST00000599476 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
GRAMD1A-210ENST00000599476 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
GRAMD1A-210ENST00000599476 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
GRAMD1A-210ENST00000599476 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
GRAMD1A-210ENST00000599476 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
GRAMD1A-210ENST00000599476 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
GRAMD1A-210ENST00000599476 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
GRAMD1A-210ENST00000599476 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
GRAMD1A-210ENST00000599476 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
GRAMD1A-210ENST00000599476 IGF1RP08069 1367 aa13.41□□□□□ -0.26
GRAMD1A-210ENST00000599476 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
GRAMD1A-210ENST00000599476 CHD1O14646 1710 aa13.39□□□□□ -0.27
GRAMD1A-210ENST00000599476 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
GRAMD1A-210ENST00000599476 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
GRAMD1A-210ENST00000599476 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
GRAMD1A-210ENST00000599476 SOCS7O14512 581 aa13.33□□□□□ -0.28
GRAMD1A-210ENST00000599476 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
GRAMD1A-210ENST00000599476 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms