RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CHMP7Q8WUX9 453 aaPredicted RBP37.05■■■■□ 3.52
SYMPK-212ENST00000598896 ARHGAP35Q9NRY4 1499 aa37.04■■■■□ 3.52
SYMPK-212ENST00000598896 FBLN2P98095 1184 aa37■■■■□ 3.51
SYMPK-212ENST00000598896 ARAP1Q96P48 1450 aa36.99■■■■□ 3.51
SYMPK-212ENST00000598896 CEP170Q5SW79 1584 aa36.96■■■■□ 3.51
SYMPK-212ENST00000598896 IQGAP2Q13576 1575 aa36.94■■■■□ 3.5
SYMPK-212ENST00000598896 CHD1O14646 1710 aa36.92■■■■□ 3.5
SYMPK-212ENST00000598896 NUP160Q12769 1436 aa36.89■■■■□ 3.5
SYMPK-212ENST00000598896 VPS8Q8N3P4 1428 aa36.89■■■■□ 3.5
SYMPK-212ENST00000598896 KIAA0586Q9BVV6 1533 aa36.89■■■■□ 3.5
SYMPK-212ENST00000598896 EFCAB5A4FU69 1503 aa36.87■■■■□ 3.49
SYMPK-212ENST00000598896 SAMD9Q5K651 1589 aa36.83■■■■□ 3.49
SYMPK-212ENST00000598896 P3H3Q8IVL6 736 aa36.77■■■■□ 3.48
SYMPK-212ENST00000598896 UGGT2Q9NYU1 1516 aa36.75■■■■□ 3.47
SYMPK-212ENST00000598896 FHOD3Q2V2M9 1422 aa36.75■■■■□ 3.47
SYMPK-212ENST00000598896 DISP1Q96F81 1524 aa36.62■■■■□ 3.45
SYMPK-212ENST00000598896 KIAA0556O60303 1618 aa36.59■■■■□ 3.45
SYMPK-212ENST00000598896 PPARGC1BQ86YN6 1023 aaKnown RBP36.56■■■■□ 3.44
SYMPK-212ENST00000598896 JPH4Q96JJ6 628 aa36.55■■■■□ 3.44
SYMPK-212ENST00000598896 PCF11O94913 1555 aaKnown RBP36.54■■■■□ 3.44
SYMPK-212ENST00000598896 FMN1Q68DA7 1419 aa36.52■■■■□ 3.44
SYMPK-212ENST00000598896 CLASP1Q7Z460 1538 aa36.48■■■■□ 3.43
SYMPK-212ENST00000598896 SHROOM2Q13796 1616 aa36.45■■■■□ 3.43
SYMPK-212ENST00000598896 CASKIN1Q8WXD9 1431 aa36.43■■■■□ 3.42
SYMPK-212ENST00000598896 FYCO1Q9BQS8 1478 aa36.42■■■■□ 3.42
SYMPK-212ENST00000598896 CARMIL2Q6F5E8 1435 aa36.4■■■■□ 3.42
SYMPK-212ENST00000598896 APLP2Q06481 763 aa36.39■■■■□ 3.42
SYMPK-212ENST00000598896 PRG4Q92954 1404 aaPredicted RBP36.37■■■■□ 3.41
SYMPK-212ENST00000598896 TTBK1Q5TCY1 1321 aaPredicted RBP36.34■■■■□ 3.41
SYMPK-212ENST00000598896 TIAM1Q13009 1591 aa36.3■■■■□ 3.4
SYMPK-212ENST00000598896 LRRIQ1Q96JM4 1722 aa36.28■■■■□ 3.4
SYMPK-212ENST00000598896 MAP3K1Q13233 1512 aa36.28■■■■□ 3.4
SYMPK-212ENST00000598896 ATP1B4Q9UN42 357 aaPredicted RBP36.28■■■■□ 3.4
SYMPK-212ENST00000598896 CFAP43Q8NDM7 1665 aa36.27■■■■□ 3.4
SYMPK-212ENST00000598896 ERCC6L2Q5T890 1561 aa36.26■■■■□ 3.4
SYMPK-212ENST00000598896 KANK4Q5T7N3 995 aaPredicted RBP36.25■■■■□ 3.39
SYMPK-212ENST00000598896 TRIM26Q12899 539 aaPredicted RBP36.22■■■■□ 3.39
SYMPK-212ENST00000598896 HECW1Q76N89 1606 aa36.21■■■■□ 3.39
SYMPK-212ENST00000598896 OSCARQ8IYS5 282 aa36.2■■■■□ 3.38
SYMPK-212ENST00000598896 RAPGEF6Q8TEU7 1601 aa36.18■■■■□ 3.38
SYMPK-212ENST00000598896 PLB1Q6P1J6 1458 aa36.15■■■■□ 3.38
SYMPK-212ENST00000598896 PCGF6Q9BYE7 350 aa36.15■■■■□ 3.38
SYMPK-212ENST00000598896 LRRC9Q6ZRR7 1453 aa36.12■■■■□ 3.37
SYMPK-212ENST00000598896 NUP153P49790 1475 aaKnown RBP36.1■■■■□ 3.37
SYMPK-212ENST00000598896 EPRSP07814 1512 aaKnown RBP36.09■■■■□ 3.37
SYMPK-212ENST00000598896 PTPRGP23470 1445 aa36.09■■■■□ 3.37
SYMPK-212ENST00000598896 CCDC18Q5T9S5 1454 aa36.08■■■■□ 3.37
SYMPK-212ENST00000598896 ABCA8O94911 1581 aa36.07■■■■□ 3.37
SYMPK-212ENST00000598896 CDK13Q14004 1512 aaKnown RBP36.04■■■■□ 3.36
SYMPK-212ENST00000598896 ARID3CA6NKF2 412 aa35.99■■■■□ 3.35
SYMPK-212ENST00000598896 MAGI3Q5TCQ9 1506 aa35.96■■■■□ 3.35
SYMPK-212ENST00000598896 MTUS2Q5JR59 1369 aa35.91■■■■□ 3.34
SYMPK-212ENST00000598896 UACAQ9BZF9 1416 aa35.89■■■■□ 3.34
SYMPK-212ENST00000598896 EHBP1L1Q8N3D4 1523 aa35.89■■■■□ 3.34
SYMPK-212ENST00000598896 ABCC2Q92887 1545 aa35.82■■■■□ 3.32
SYMPK-212ENST00000598896 ATP10BO94823 1461 aa35.81■■■■□ 3.32
SYMPK-212ENST00000598896 PHLDB1Q86UU1 1377 aa35.8■■■■□ 3.32
SYMPK-212ENST00000598896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.78■■■■□ 3.32
SYMPK-212ENST00000598896 HNRNPUL2Q1KMD3 747 aaKnown RBP35.78■■■■□ 3.32
SYMPK-212ENST00000598896 SUPT6HQ7KZ85 1726 aaKnown RBP35.78■■■■□ 3.32
SYMPK-212ENST00000598896 NCOA2Q15596 1464 aa35.74■■■■□ 3.31
SYMPK-212ENST00000598896 RRBP1Q9P2E9 1410 aaKnown RBP35.73■■■■□ 3.31
SYMPK-212ENST00000598896 UHRF1BP1LA0JNW5 1464 aa35.73■■■■□ 3.31
SYMPK-212ENST00000598896 ARHGEF11O15085 1522 aa35.71■■■■□ 3.31
SYMPK-212ENST00000598896 CDK11AQ9UQ88 783 aaPredicted RBP35.69■■■■□ 3.3
SYMPK-212ENST00000598896 TROQ12816 1431 aaPredicted RBP35.67■■■■□ 3.3
SYMPK-212ENST00000598896 ADCY10Q96PN6 1610 aa35.66■■■■□ 3.3
SYMPK-212ENST00000598896 CCNB3Q8WWL7 1395 aa35.63■■■■□ 3.29
SYMPK-212ENST00000598896 KDM5BQ9UGL1 1544 aa35.61■■■■□ 3.29
SYMPK-212ENST00000598896 ZCCHC11Q5TAX3 1644 aaKnown RBP35.6■■■■□ 3.29
SYMPK-212ENST00000598896 KIF14Q15058 1648 aa35.58■■■■□ 3.29
SYMPK-212ENST00000598896 PLEKHD1A6NEE1 506 aa35.56■■■■□ 3.28
SYMPK-212ENST00000598896 MYOM3Q5VTT5 1437 aa35.56■■■■□ 3.28
SYMPK-212ENST00000598896 FGD6Q6ZV73 1430 aa35.54■■■■□ 3.28
SYMPK-212ENST00000598896 RIMBP3CA6NJZ7 1639 aa35.53■■■■□ 3.28
SYMPK-212ENST00000598896 RIMBP3BA6NNM3 1639 aa35.53■■■■□ 3.28
SYMPK-212ENST00000598896 RIMBP3Q9UFD9 1639 aa35.53■■■■□ 3.28
SYMPK-212ENST00000598896 ABCC10Q5T3U5 1492 aa35.41■■■■□ 3.26
SYMPK-212ENST00000598896 FAM50AQ14320 339 aaKnown RBP35.4■■■■□ 3.26
SYMPK-212ENST00000598896 PTPN23Q9H3S7 1636 aa35.4■■■■□ 3.26
SYMPK-212ENST00000598896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.38■■■■□ 3.25
SYMPK-212ENST00000598896 MIA2Q96PC5 1412 aa35.37■■■■□ 3.25
SYMPK-212ENST00000598896 GPATCH8Q9UKJ3 1502 aaKnown RBP35.36■■■■□ 3.25
SYMPK-212ENST00000598896 ITSN2Q9NZM3 1697 aa35.35■■■■□ 3.25
SYMPK-212ENST00000598896 TCOF1Q13428 1488 aaKnown RBP35.33■■■■□ 3.25
SYMPK-212ENST00000598896 CDC42BPAQ5VT25 1732 aa35.33■■■■□ 3.25
SYMPK-212ENST00000598896 ITGAEP38570 1179 aa35.31■■■■□ 3.24
SYMPK-212ENST00000598896 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
SYMPK-212ENST00000598896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.29■■■■□ 3.24
SYMPK-212ENST00000598896 TTC37Q6PGP7 1564 aa35.29■■■■□ 3.24
SYMPK-212ENST00000598896 WDR7Q9Y4E6 1490 aa35.27■■■■□ 3.24
SYMPK-212ENST00000598896 KCNH8Q96L42 1107 aa35.24■■■■□ 3.23
SYMPK-212ENST00000598896 ASXL2Q76L83 1435 aa35.24■■■■□ 3.23
SYMPK-212ENST00000598896 CFDP1Q9UEE9 299 aaPredicted RBP35.21■■■■□ 3.23
SYMPK-212ENST00000598896 NPM1P06748 294 aaKnown RBP eCLIP35.2■■■■□ 3.23
SYMPK-212ENST00000598896 PREX2Q70Z35 1606 aa35.2■■■■□ 3.23
SYMPK-212ENST00000598896 ZNF644Q9H582 1327 aaPredicted RBP35.19■■■■□ 3.22
SYMPK-212ENST00000598896 CDC42BPBQ9Y5S2 1711 aa35.18■■■■□ 3.22
SYMPK-212ENST00000598896 CAMSAP2Q08AD1 1489 aa35.16■■■■□ 3.22
SYMPK-212ENST00000598896 PTPRKQ15262 1439 aa35.15■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms