RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	ARAP1	Q96P48	1450 aa		33.38	■■■□□ 2.93
IRF3-221	ENST00000598808	CSRNP3	Q8WYN3	585 aa		33.37	■■■□□ 2.93
IRF3-221	ENST00000598808	PRX	Q9BXM0	1461 aa		33.28	■■■□□ 2.92
IRF3-221	ENST00000598808	CYB5RL	Q6IPT4	315 aa		33.26	■■■□□ 2.92
IRF3-221	ENST00000598808	KIAA0586	Q9BVV6	1533 aa		33.2	■■■□□ 2.91
IRF3-221	ENST00000598808	SHROOM2	Q13796	1616 aa		33.17	■■■□□ 2.9
IRF3-221	ENST00000598808	EHMT2	Q96KQ7	1210 aa		33.15	■■■□□ 2.9
IRF3-221	ENST00000598808	ERCC6L2	Q5T890	1561 aa		33.14	■■■□□ 2.9
IRF3-221	ENST00000598808	IQGAP2	Q13576	1575 aa		33.13	■■■□□ 2.89
IRF3-221	ENST00000598808	JPH4	Q96JJ6	628 aa		33.12	■■■□□ 2.89
IRF3-221	ENST00000598808	CTTNBP2	Q8WZ74	1663 aa		33.12	■■■□□ 2.89
IRF3-221	ENST00000598808	KIF21B	O75037	1637 aa		33.1	■■■□□ 2.89
IRF3-221	ENST00000598808	PRG4	Q92954	1404 aa	Predicted RBP	33.09	■■■□□ 2.89
IRF3-221	ENST00000598808	GOLGA3	Q08378	1498 aa		32.97	■■■□□ 2.87
IRF3-221	ENST00000598808	UBTF	P17480	764 aa	Known RBP	32.93	■■■□□ 2.86
IRF3-221	ENST00000598808	CARMIL2	Q6F5E8	1435 aa		32.91	■■■□□ 2.86
IRF3-221	ENST00000598808	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.89	■■■□□ 2.86
IRF3-221	ENST00000598808	UGGT2	Q9NYU1	1516 aa		32.88	■■■□□ 2.85
IRF3-221	ENST00000598808	RANGAP1	P46060	587 aa	Predicted RBP	32.88	■■■□□ 2.85
IRF3-221	ENST00000598808	DISP1	Q96F81	1524 aa		32.81	■■■□□ 2.84
IRF3-221	ENST00000598808	KIAA0556	O60303	1618 aa		32.81	■■■□□ 2.84
IRF3-221	ENST00000598808	TNIK	Q9UKE5	1360 aa		32.75	■■■□□ 2.83
IRF3-221	ENST00000598808	PTPRG	P23470	1445 aa		32.72	■■■□□ 2.83
IRF3-221	ENST00000598808	P3H3	Q8IVL6	736 aa		32.7	■■■□□ 2.83
IRF3-221	ENST00000598808	SAMD9	Q5K651	1589 aa		32.64	■■■□□ 2.82
IRF3-221	ENST00000598808	TRH	P20396	242 aa	Predicted RBP	32.63	■■■□□ 2.81
IRF3-221	ENST00000598808	EFCAB5	A4FU69	1503 aa		32.57	■■■□□ 2.8
IRF3-221	ENST00000598808	ADCY10	Q96PN6	1610 aa		32.55	■■■□□ 2.8
IRF3-221	ENST00000598808	FHOD3	Q2V2M9	1422 aa		32.55	■■■□□ 2.8
IRF3-221	ENST00000598808	LOC105371045	A0A1W2PR82	267 aa		32.5	■■■□□ 2.79
IRF3-221	ENST00000598808	UACA	Q9BZF9	1416 aa		32.49	■■■□□ 2.79
IRF3-221	ENST00000598808	NPM1	P06748	294 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
IRF3-221	ENST00000598808	PLB1	Q6P1J6	1458 aa		32.45	■■■□□ 2.79
IRF3-221	ENST00000598808	ABCC2	Q92887	1545 aa		32.44	■■■□□ 2.78
IRF3-221	ENST00000598808	ARHGAP35	Q9NRY4	1499 aa		32.44	■■■□□ 2.78
IRF3-221	ENST00000598808	UHRF1BP1L	A0JNW5	1464 aa		32.39	■■■□□ 2.78
IRF3-221	ENST00000598808	CLIP1	P30622	1438 aa		32.39	■■■□□ 2.78
IRF3-221	ENST00000598808	ABCA8	O94911	1581 aa		32.38	■■■□□ 2.77
IRF3-221	ENST00000598808	MAPKBP1	O60336	1514 aa		32.36	■■■□□ 2.77
IRF3-221	ENST00000598808	ARID3C	A6NKF2	412 aa		32.33	■■■□□ 2.77
IRF3-221	ENST00000598808	KIF13A	Q9H1H9	1805 aa		32.33	■■■□□ 2.77
IRF3-221	ENST00000598808	RAPGEF6	Q8TEU7	1601 aa		32.32	■■■□□ 2.77
IRF3-221	ENST00000598808	CEP162	Q5TB80	1403 aa		32.31	■■■□□ 2.76
IRF3-221	ENST00000598808	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.28	■■■□□ 2.76
IRF3-221	ENST00000598808	FMN1	Q68DA7	1419 aa		32.27	■■■□□ 2.76
IRF3-221	ENST00000598808	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.24	■■■□□ 2.75
IRF3-221	ENST00000598808	KDM5B	Q9UGL1	1544 aa		32.24	■■■□□ 2.75
IRF3-221	ENST00000598808	ABCC10	Q5T3U5	1492 aa		32.23	■■■□□ 2.75
IRF3-221	ENST00000598808	DIP2B	Q9P265	1576 aa		32.22	■■■□□ 2.75
IRF3-221	ENST00000598808	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.19	■■■□□ 2.74
IRF3-221	ENST00000598808	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.19	■■■□□ 2.74
IRF3-221	ENST00000598808	NUP153	P49790	1475 aa	Known RBP	32.16	■■■□□ 2.74
IRF3-221	ENST00000598808	ASXL2	Q76L83	1435 aa		32.16	■■■□□ 2.74
IRF3-221	ENST00000598808	HECW1	Q76N89	1606 aa		32.14	■■■□□ 2.74
IRF3-221	ENST00000598808	FAM69C	Q0P6D2	419 aa		32.11	■■■□□ 2.73
IRF3-221	ENST00000598808	PCF11	O94913	1555 aa	Known RBP	32.11	■■■□□ 2.73
IRF3-221	ENST00000598808	ATP10B	O94823	1461 aa		32.11	■■■□□ 2.73
IRF3-221	ENST00000598808	WDR7	Q9Y4E6	1490 aa		32.05	■■■□□ 2.72
IRF3-221	ENST00000598808	CDK13	Q14004	1512 aa	Known RBP	32.04	■■■□□ 2.72
IRF3-221	ENST00000598808	CASKIN1	Q8WXD9	1431 aa		32.02	■■■□□ 2.72
IRF3-221	ENST00000598808	FYCO1	Q9BQS8	1478 aa		32	■■■□□ 2.71
IRF3-221	ENST00000598808	KCNH8	Q96L42	1107 aa		31.99	■■■□□ 2.71
IRF3-221	ENST00000598808	EPRS	P07814	1512 aa	Known RBP	31.99	■■■□□ 2.71
IRF3-221	ENST00000598808	GLI2	P10070	1586 aa		31.96	■■■□□ 2.71
IRF3-221	ENST00000598808	LRRIQ1	Q96JM4	1722 aa		31.93	■■■□□ 2.7
IRF3-221	ENST00000598808	TSPOAP1	O95153	1857 aa		31.93	■■■□□ 2.7
IRF3-221	ENST00000598808	PLEKHD1	A6NEE1	506 aa		31.91	■■■□□ 2.7
IRF3-221	ENST00000598808	CCDC18	Q5T9S5	1454 aa		31.91	■■■□□ 2.7
IRF3-221	ENST00000598808	VPS8	Q8N3P4	1428 aa		31.87	■■■□□ 2.69
IRF3-221	ENST00000598808	PPRC1	Q5VV67	1664 aa	Known RBP	31.86	■■■□□ 2.69
IRF3-221	ENST00000598808	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.85	■■■□□ 2.69
IRF3-221	ENST00000598808	MAP3K4	Q9Y6R4	1608 aa		31.82	■■■□□ 2.68
IRF3-221	ENST00000598808	CFAP43	Q8NDM7	1665 aa		31.75	■■■□□ 2.67
IRF3-221	ENST00000598808	KDM6B	O15054	1643 aa		31.73	■■■□□ 2.67
IRF3-221	ENST00000598808	TRO	Q12816	1431 aa	Predicted RBP	31.73	■■■□□ 2.67
IRF3-221	ENST00000598808	CD109	Q6YHK3	1445 aa		31.72	■■■□□ 2.67
IRF3-221	ENST00000598808	KIF14	Q15058	1648 aa		31.71	■■■□□ 2.67
IRF3-221	ENST00000598808	ABCA9	Q8IUA7	1624 aa		31.71	■■■□□ 2.67
IRF3-221	ENST00000598808	MAGI3	Q5TCQ9	1506 aa		31.68	■■■□□ 2.66
IRF3-221	ENST00000598808	TTC37	Q6PGP7	1564 aa		31.66	■■■□□ 2.66
IRF3-221	ENST00000598808	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.65	■■■□□ 2.66	3e-7	■□□□□ 11.1
IRF3-221	ENST00000598808	MTUS2	Q5JR59	1369 aa		31.65	■■■□□ 2.66
IRF3-221	ENST00000598808	TEX14	Q8IWB6	1497 aa		31.64	■■■□□ 2.66
IRF3-221	ENST00000598808	TIAM1	Q13009	1591 aa		31.63	■■■□□ 2.65
IRF3-221	ENST00000598808	APLP2	Q06481	763 aa		31.63	■■■□□ 2.65
IRF3-221	ENST00000598808	EHBP1L1	Q8N3D4	1523 aa		31.58	■■■□□ 2.65
IRF3-221	ENST00000598808	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.55	■■■□□ 2.64
IRF3-221	ENST00000598808	MYO5C	Q9NQX4	1742 aa		31.54	■■■□□ 2.64
IRF3-221	ENST00000598808	MAP3K1	Q13233	1512 aa		31.47	■■■□□ 2.63
IRF3-221	ENST00000598808	LRRC9	Q6ZRR7	1453 aa		31.46	■■■□□ 2.63
IRF3-221	ENST00000598808	CFAP74	Q9C0B2	1584 aa		31.45	■■■□□ 2.63
IRF3-221	ENST00000598808	ARHGAP5	Q13017	1502 aa		31.45	■■■□□ 2.63
IRF3-221	ENST00000598808	FANCA	O15360	1455 aa		31.45	■■■□□ 2.63
IRF3-221	ENST00000598808	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.45	■■■□□ 2.62
IRF3-221	ENST00000598808	PLCH2	O75038	1416 aa		31.44	■■■□□ 2.62
IRF3-221	ENST00000598808	KANK4	Q5T7N3	995 aa	Predicted RBP	31.41	■■■□□ 2.62
IRF3-221	ENST00000598808	NEO1	Q92859	1461 aa		31.41	■■■□□ 2.62
IRF3-221	ENST00000598808	CCNB3	Q8WWL7	1395 aa		31.4	■■■□□ 2.62
IRF3-221	ENST00000598808	PREX2	Q70Z35	1606 aa		31.4	■■■□□ 2.62
IRF3-221	ENST00000598808	CDC42BPA	Q5VT25	1732 aa		31.39	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 69 ms