RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
CAPN12-204ENST00000594552 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
CAPN12-204ENST00000594552 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
CAPN12-204ENST00000594552 CUL7Q14999 1698 aa22.51■■□□□ 1.19
CAPN12-204ENST00000594552 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
CAPN12-204ENST00000594552 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
CAPN12-204ENST00000594552 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
CAPN12-204ENST00000594552 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
CAPN12-204ENST00000594552 ADRA2BP18089 450 aa22.4■■□□□ 1.18
CAPN12-204ENST00000594552 IGF1RP08069 1367 aa22.38■■□□□ 1.17
CAPN12-204ENST00000594552 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
CAPN12-204ENST00000594552 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
CAPN12-204ENST00000594552 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
CAPN12-204ENST00000594552 IQGAP2Q13576 1575 aa22.22■■□□□ 1.15
CAPN12-204ENST00000594552 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
CAPN12-204ENST00000594552 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.15
CAPN12-204ENST00000594552 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
CAPN12-204ENST00000594552 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
CAPN12-204ENST00000594552 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
CAPN12-204ENST00000594552 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
CAPN12-204ENST00000594552 PTPRGP23470 1445 aa22.14■■□□□ 1.14
CAPN12-204ENST00000594552 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
CAPN12-204ENST00000594552 ABCC10Q5T3U5 1492 aa22.11■■□□□ 1.13
CAPN12-204ENST00000594552 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
CAPN12-204ENST00000594552 DIP2BQ9P265 1576 aa22.09■■□□□ 1.13
CAPN12-204ENST00000594552 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
CAPN12-204ENST00000594552 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
CAPN12-204ENST00000594552 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
CAPN12-204ENST00000594552 UGGT2Q9NYU1 1516 aa22.02■■□□□ 1.12
CAPN12-204ENST00000594552 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
CAPN12-204ENST00000594552 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
CAPN12-204ENST00000594552 UACAQ9BZF9 1416 aa21.98■■□□□ 1.11
CAPN12-204ENST00000594552 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
CAPN12-204ENST00000594552 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
CAPN12-204ENST00000594552 GOLGA3Q08378 1498 aa21.94■■□□□ 1.1
CAPN12-204ENST00000594552 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
CAPN12-204ENST00000594552 KDM6BO15054 1643 aa21.93■■□□□ 1.1
CAPN12-204ENST00000594552 ASXL2Q76L83 1435 aa21.93■■□□□ 1.1
CAPN12-204ENST00000594552 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
CAPN12-204ENST00000594552 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
CAPN12-204ENST00000594552 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
CAPN12-204ENST00000594552 GLI2P10070 1586 aa21.83■■□□□ 1.09
CAPN12-204ENST00000594552 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
CAPN12-204ENST00000594552 EEA1Q15075 1411 aa21.79■■□□□ 1.08
CAPN12-204ENST00000594552 EPRSP07814 1512 aaKnown RBP21.78■■□□□ 1.08
CAPN12-204ENST00000594552 CSRNP3Q8WYN3 585 aa21.77■■□□□ 1.08
CAPN12-204ENST00000594552 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.07
CAPN12-204ENST00000594552 TEX14Q8IWB6 1497 aa21.75■■□□□ 1.07
CAPN12-204ENST00000594552 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
CAPN12-204ENST00000594552 ABCA8O94911 1581 aa21.74■■□□□ 1.07
CAPN12-204ENST00000594552 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
CAPN12-204ENST00000594552 MSH5O43196 834 aa21.69■■□□□ 1.06
CAPN12-204ENST00000594552 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
CAPN12-204ENST00000594552 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
CAPN12-204ENST00000594552 CFAP43Q8NDM7 1665 aa21.64■■□□□ 1.05
CAPN12-204ENST00000594552 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
CAPN12-204ENST00000594552 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
CAPN12-204ENST00000594552 KCNH8Q96L42 1107 aa21.62■■□□□ 1.05
CAPN12-204ENST00000594552 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
CAPN12-204ENST00000594552 CD109Q6YHK3 1445 aa21.6■■□□□ 1.05
CAPN12-204ENST00000594552 KIF21BO75037 1637 aa21.58■■□□□ 1.05
CAPN12-204ENST00000594552 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
CAPN12-204ENST00000594552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
CAPN12-204ENST00000594552 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
CAPN12-204ENST00000594552 FHOD3Q2V2M9 1422 aa21.54■■□□□ 1.04
CAPN12-204ENST00000594552 ATP10BO94823 1461 aa21.53■■□□□ 1.04
CAPN12-204ENST00000594552 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
CAPN12-204ENST00000594552 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.03
CAPN12-204ENST00000594552 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
CAPN12-204ENST00000594552 ADGRL1O94910 1474 aa21.47■■□□□ 1.03
CAPN12-204ENST00000594552 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
CAPN12-204ENST00000594552 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
CAPN12-204ENST00000594552 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
CAPN12-204ENST00000594552 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
CAPN12-204ENST00000594552 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
CAPN12-204ENST00000594552 ARAP3Q8WWN8 1544 aa21.36■■□□□ 1.01
CAPN12-204ENST00000594552 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
CAPN12-204ENST00000594552 NEO1Q92859 1461 aa21.34■■□□□ 1.01
CAPN12-204ENST00000594552 HECW1Q76N89 1606 aa21.33■■□□□ 1
CAPN12-204ENST00000594552 FMN1Q68DA7 1419 aa21.32■■□□□ 1
CAPN12-204ENST00000594552 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
CAPN12-204ENST00000594552 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
CAPN12-204ENST00000594552 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
CAPN12-204ENST00000594552 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
CAPN12-204ENST00000594552 TTC37Q6PGP7 1564 aa21.25■□□□□ 0.99
CAPN12-204ENST00000594552 FANCAO15360 1455 aa21.25■□□□□ 0.99
CAPN12-204ENST00000594552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
CAPN12-204ENST00000594552 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
CAPN12-204ENST00000594552 FRMPD1Q5SYB0 1578 aa21.22■□□□□ 0.99
CAPN12-204ENST00000594552 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
CAPN12-204ENST00000594552 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
CAPN12-204ENST00000594552 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
CAPN12-204ENST00000594552 KIF14Q15058 1648 aa21.18■□□□□ 0.98
CAPN12-204ENST00000594552 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
CAPN12-204ENST00000594552 CLIP1P30622 1438 aa21.17■□□□□ 0.98
CAPN12-204ENST00000594552 ARHGEF40Q8TER5 1519 aa21.17■□□□□ 0.98
CAPN12-204ENST00000594552 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
CAPN12-204ENST00000594552 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
CAPN12-204ENST00000594552 HECW2Q9P2P5 1572 aa21.15■□□□□ 0.98
CAPN12-204ENST00000594552 PCF11O94913 1555 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms