RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
CAPN12-204ENST00000594552 AEBP2Q6ZN18 517 aaPredicted RBP29.69■■■□□ 2.34
CAPN12-204ENST00000594552 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
CAPN12-204ENST00000594552 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
CAPN12-204ENST00000594552 ABCC9O60706 1549 aa28.67■■■□□ 2.18
CAPN12-204ENST00000594552 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.98
CAPN12-204ENST00000594552 NACADO15069 1562 aa27.2■■□□□ 1.94
CAPN12-204ENST00000594552 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
CAPN12-204ENST00000594552 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
CAPN12-204ENST00000594552 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
CAPN12-204ENST00000594552 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
CAPN12-204ENST00000594552 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.863e-7■■■■□ 22.5
CAPN12-204ENST00000594552 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
CAPN12-204ENST00000594552 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
CAPN12-204ENST00000594552 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
CAPN12-204ENST00000594552 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
CAPN12-204ENST00000594552 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
CAPN12-204ENST00000594552 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
CAPN12-204ENST00000594552 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
CAPN12-204ENST00000594552 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
CAPN12-204ENST00000594552 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
CAPN12-204ENST00000594552 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
CAPN12-204ENST00000594552 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
CAPN12-204ENST00000594552 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
CAPN12-204ENST00000594552 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
CAPN12-204ENST00000594552 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
CAPN12-204ENST00000594552 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
CAPN12-204ENST00000594552 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
CAPN12-204ENST00000594552 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
CAPN12-204ENST00000594552 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
CAPN12-204ENST00000594552 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
CAPN12-204ENST00000594552 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
CAPN12-204ENST00000594552 CUX2O14529 1486 aa24.68■■□□□ 1.54
CAPN12-204ENST00000594552 NESP48681 1621 aa24.62■■□□□ 1.53
CAPN12-204ENST00000594552 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
CAPN12-204ENST00000594552 WIZO95785 1651 aa24.47■■□□□ 1.51
CAPN12-204ENST00000594552 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
CAPN12-204ENST00000594552 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
CAPN12-204ENST00000594552 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
CAPN12-204ENST00000594552 DNAJC5Q9H3Z4 198 aa24.37■■□□□ 1.49
CAPN12-204ENST00000594552 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
CAPN12-204ENST00000594552 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
CAPN12-204ENST00000594552 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
CAPN12-204ENST00000594552 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CAPN12-204ENST00000594552 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
CAPN12-204ENST00000594552 WDR62O43379 1518 aa24.09■■□□□ 1.45
CAPN12-204ENST00000594552 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
CAPN12-204ENST00000594552 CFTRP13569 1480 aa24.06■■□□□ 1.44
CAPN12-204ENST00000594552 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
CAPN12-204ENST00000594552 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
CAPN12-204ENST00000594552 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
CAPN12-204ENST00000594552 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
CAPN12-204ENST00000594552 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
CAPN12-204ENST00000594552 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
CAPN12-204ENST00000594552 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
CAPN12-204ENST00000594552 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
CAPN12-204ENST00000594552 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
CAPN12-204ENST00000594552 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
CAPN12-204ENST00000594552 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
CAPN12-204ENST00000594552 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
CAPN12-204ENST00000594552 FOXD1Q16676 465 aa23.4■■□□□ 1.34
CAPN12-204ENST00000594552 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
CAPN12-204ENST00000594552 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
CAPN12-204ENST00000594552 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
CAPN12-204ENST00000594552 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.327e-8■□□□□ 9.3
CAPN12-204ENST00000594552 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
CAPN12-204ENST00000594552 SOGA1O94964 1423 aa23.28■■□□□ 1.32
CAPN12-204ENST00000594552 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
CAPN12-204ENST00000594552 CHD1O14646 1710 aa23.27■■□□□ 1.32
CAPN12-204ENST00000594552 CUX1P39880 1505 aa23.25■■□□□ 1.31
CAPN12-204ENST00000594552 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
CAPN12-204ENST00000594552 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
CAPN12-204ENST00000594552 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
CAPN12-204ENST00000594552 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
CAPN12-204ENST00000594552 FBLN2P98095 1184 aa23.23■■□□□ 1.31
CAPN12-204ENST00000594552 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
CAPN12-204ENST00000594552 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
CAPN12-204ENST00000594552 SNAPC4Q5SXM2 1469 aa23.16■■□□□ 1.3
CAPN12-204ENST00000594552 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
CAPN12-204ENST00000594552 MAGI1Q96QZ7 1491 aaPredicted RBP23.1■■□□□ 1.29
CAPN12-204ENST00000594552 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
CAPN12-204ENST00000594552 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
CAPN12-204ENST00000594552 SYNJ1O43426 1573 aa23.05■■□□□ 1.28
CAPN12-204ENST00000594552 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
CAPN12-204ENST00000594552 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
CAPN12-204ENST00000594552 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
CAPN12-204ENST00000594552 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CAPN12-204ENST00000594552 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
CAPN12-204ENST00000594552 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
CAPN12-204ENST00000594552 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
CAPN12-204ENST00000594552 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
CAPN12-204ENST00000594552 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
CAPN12-204ENST00000594552 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
CAPN12-204ENST00000594552 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
CAPN12-204ENST00000594552 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CAPN12-204ENST00000594552 TRHP20396 242 aaPredicted RBP22.76■■□□□ 1.23
CAPN12-204ENST00000594552 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
CAPN12-204ENST00000594552 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CAPN12-204ENST00000594552 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
CAPN12-204ENST00000594552 NUP160Q12769 1436 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms