RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
SIN3B-204ENST00000594372 TSPOAP1O95153 1857 aa21.9■■□□□ 1.1
SIN3B-204ENST00000594372 ADCY10Q96PN6 1610 aa21.89■■□□□ 1.09
SIN3B-204ENST00000594372 DIP2BQ9P265 1576 aa21.83■■□□□ 1.09
SIN3B-204ENST00000594372 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
SIN3B-204ENST00000594372 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
SIN3B-204ENST00000594372 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
SIN3B-204ENST00000594372 TTBK1Q5TCY1 1321 aaPredicted RBP21.77■■□□□ 1.07
SIN3B-204ENST00000594372 CUL7Q14999 1698 aa21.75■■□□□ 1.07
SIN3B-204ENST00000594372 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
SIN3B-204ENST00000594372 IGF1RP08069 1367 aa21.73■■□□□ 1.07
SIN3B-204ENST00000594372 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
SIN3B-204ENST00000594372 KDM6BO15054 1643 aa21.71■■□□□ 1.07
SIN3B-204ENST00000594372 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
SIN3B-204ENST00000594372 PPRC1Q5VV67 1664 aaKnown RBP21.6■■□□□ 1.05
SIN3B-204ENST00000594372 PTPRGP23470 1445 aa21.59■■□□□ 1.05
SIN3B-204ENST00000594372 KDM4FA0A1W2PPD8 638 aa21.58■■□□□ 1.05
SIN3B-204ENST00000594372 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
SIN3B-204ENST00000594372 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
SIN3B-204ENST00000594372 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
SIN3B-204ENST00000594372 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
SIN3B-204ENST00000594372 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
SIN3B-204ENST00000594372 CARMIL2Q6F5E8 1435 aa21.48■■□□□ 1.03
SIN3B-204ENST00000594372 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
SIN3B-204ENST00000594372 ZCCHC11Q5TAX3 1644 aaKnown RBP21.45■■□□□ 1.02
SIN3B-204ENST00000594372 GLI2P10070 1586 aa21.44■■□□□ 1.02
SIN3B-204ENST00000594372 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
SIN3B-204ENST00000594372 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
SIN3B-204ENST00000594372 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
SIN3B-204ENST00000594372 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
SIN3B-204ENST00000594372 UHRF1BP1LA0JNW5 1464 aa21.4■■□□□ 1.02
SIN3B-204ENST00000594372 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.02
SIN3B-204ENST00000594372 EPRSP07814 1512 aaKnown RBP21.38■■□□□ 1.01
SIN3B-204ENST00000594372 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
SIN3B-204ENST00000594372 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
SIN3B-204ENST00000594372 UGGT2Q9NYU1 1516 aa21.36■■□□□ 1.01
SIN3B-204ENST00000594372 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
SIN3B-204ENST00000594372 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
SIN3B-204ENST00000594372 WDR7Q9Y4E6 1490 aa21.23■□□□□ 0.99
SIN3B-204ENST00000594372 TEX14Q8IWB6 1497 aa21.22■□□□□ 0.99
SIN3B-204ENST00000594372 ILDR1Q86SU0 546 aaPredicted RBP21.21■□□□□ 0.99
SIN3B-204ENST00000594372 HECW2Q9P2P5 1572 aa21.21■□□□□ 0.99
SIN3B-204ENST00000594372 ABCA8O94911 1581 aa21.19■□□□□ 0.98
SIN3B-204ENST00000594372 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
SIN3B-204ENST00000594372 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
SIN3B-204ENST00000594372 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
SIN3B-204ENST00000594372 KIF21BO75037 1637 aa21.16■□□□□ 0.98
SIN3B-204ENST00000594372 CD109Q6YHK3 1445 aa21.12■□□□□ 0.97
SIN3B-204ENST00000594372 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
SIN3B-204ENST00000594372 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
SIN3B-204ENST00000594372 MAGI3Q5TCQ9 1506 aa21.08■□□□□ 0.96
SIN3B-204ENST00000594372 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
SIN3B-204ENST00000594372 ATP10BO94823 1461 aa20.99■□□□□ 0.95
SIN3B-204ENST00000594372 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
SIN3B-204ENST00000594372 SAMD9Q5K651 1589 aa20.95■□□□□ 0.94
SIN3B-204ENST00000594372 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
SIN3B-204ENST00000594372 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
SIN3B-204ENST00000594372 ARAP3Q8WWN8 1544 aa20.93■□□□□ 0.94
SIN3B-204ENST00000594372 ADAMTSL3P82987 1691 aa20.9■□□□□ 0.94
SIN3B-204ENST00000594372 FRMPD1Q5SYB0 1578 aa20.9■□□□□ 0.94
SIN3B-204ENST00000594372 RAPGEF3O95398 923 aa20.9■□□□□ 0.94
SIN3B-204ENST00000594372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
SIN3B-204ENST00000594372 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
SIN3B-204ENST00000594372 MADDQ8WXG6 1647 aa20.86■□□□□ 0.93
SIN3B-204ENST00000594372 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
SIN3B-204ENST00000594372 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
SIN3B-204ENST00000594372 PTPRMP28827 1452 aa20.83■□□□□ 0.93
SIN3B-204ENST00000594372 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
SIN3B-204ENST00000594372 RIMS1Q86UR5 1692 aaKnown RBP20.82■□□□□ 0.92
SIN3B-204ENST00000594372 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
SIN3B-204ENST00000594372 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
SIN3B-204ENST00000594372 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
SIN3B-204ENST00000594372 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
SIN3B-204ENST00000594372 NEO1Q92859 1461 aa20.78■□□□□ 0.92
SIN3B-204ENST00000594372 ARID4BQ4LE39 1312 aaPredicted RBP20.77■□□□□ 0.91
SIN3B-204ENST00000594372 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
SIN3B-204ENST00000594372 ARHGEF40Q8TER5 1519 aa20.75■□□□□ 0.91
SIN3B-204ENST00000594372 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
SIN3B-204ENST00000594372 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
SIN3B-204ENST00000594372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
SIN3B-204ENST00000594372 CDK13Q14004 1512 aaKnown RBP20.71■□□□□ 0.91
SIN3B-204ENST00000594372 PHLDB1Q86UU1 1377 aa20.71■□□□□ 0.91
SIN3B-204ENST00000594372 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
SIN3B-204ENST00000594372 LMTK3Q96Q04 1460 aa20.69■□□□□ 0.9
SIN3B-204ENST00000594372 AKNAQ7Z591 1439 aa20.67■□□□□ 0.9
SIN3B-204ENST00000594372 FANCAO15360 1455 aa20.67■□□□□ 0.9
SIN3B-204ENST00000594372 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
SIN3B-204ENST00000594372 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
SIN3B-204ENST00000594372 YEATS2Q9ULM3 1422 aa20.65■□□□□ 0.9
SIN3B-204ENST00000594372 FER1L4A9Z1Z3 1794 aa20.64■□□□□ 0.9
SIN3B-204ENST00000594372 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
SIN3B-204ENST00000594372 HSPA2P54652 639 aa20.63■□□□□ 0.89
SIN3B-204ENST00000594372 FBXO41Q8TF61 875 aa20.63■□□□□ 0.89
SIN3B-204ENST00000594372 HECW1Q76N89 1606 aa20.62■□□□□ 0.89
SIN3B-204ENST00000594372 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
SIN3B-204ENST00000594372 MLECQ14165 292 aa20.61■□□□□ 0.89
SIN3B-204ENST00000594372 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
SIN3B-204ENST00000594372 ZMYM4Q5VZL5 1548 aa20.6■□□□□ 0.89
SIN3B-204ENST00000594372 EEA1Q15075 1411 aa20.59■□□□□ 0.89
SIN3B-204ENST00000594372 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms