RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
SIN3B-204ENST00000594372 ABCC9O60706 1549 aa28.45■■■□□ 2.15
SIN3B-204ENST00000594372 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
SIN3B-204ENST00000594372 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
SIN3B-204ENST00000594372 RB1CC1Q8TDY2 1594 aa26.85■■□□□ 1.89
SIN3B-204ENST00000594372 NACADO15069 1562 aa26.56■■□□□ 1.84
SIN3B-204ENST00000594372 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
SIN3B-204ENST00000594372 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
SIN3B-204ENST00000594372 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
SIN3B-204ENST00000594372 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
SIN3B-204ENST00000594372 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
SIN3B-204ENST00000594372 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
SIN3B-204ENST00000594372 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
SIN3B-204ENST00000594372 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
SIN3B-204ENST00000594372 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
SIN3B-204ENST00000594372 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
SIN3B-204ENST00000594372 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
SIN3B-204ENST00000594372 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
SIN3B-204ENST00000594372 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
SIN3B-204ENST00000594372 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
SIN3B-204ENST00000594372 NCAPD3P42695 1498 aa24.49■■□□□ 1.51
SIN3B-204ENST00000594372 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
SIN3B-204ENST00000594372 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
SIN3B-204ENST00000594372 CUX2O14529 1486 aa24.45■■□□□ 1.5
SIN3B-204ENST00000594372 NESP48681 1621 aa24.41■■□□□ 1.5
SIN3B-204ENST00000594372 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
SIN3B-204ENST00000594372 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
SIN3B-204ENST00000594372 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
SIN3B-204ENST00000594372 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
SIN3B-204ENST00000594372 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
SIN3B-204ENST00000594372 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
SIN3B-204ENST00000594372 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
SIN3B-204ENST00000594372 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
SIN3B-204ENST00000594372 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SIN3B-204ENST00000594372 WIZO95785 1651 aa23.91■■□□□ 1.42
SIN3B-204ENST00000594372 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
SIN3B-204ENST00000594372 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
SIN3B-204ENST00000594372 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
SIN3B-204ENST00000594372 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
SIN3B-204ENST00000594372 WDR62O43379 1518 aa23.7■■□□□ 1.38
SIN3B-204ENST00000594372 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
SIN3B-204ENST00000594372 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
SIN3B-204ENST00000594372 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
SIN3B-204ENST00000594372 CFTRP13569 1480 aa23.45■■□□□ 1.34
SIN3B-204ENST00000594372 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
SIN3B-204ENST00000594372 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
SIN3B-204ENST00000594372 PRDM2Q13029 1718 aa23.4■■□□□ 1.34
SIN3B-204ENST00000594372 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
SIN3B-204ENST00000594372 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
SIN3B-204ENST00000594372 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
SIN3B-204ENST00000594372 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
SIN3B-204ENST00000594372 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
SIN3B-204ENST00000594372 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
SIN3B-204ENST00000594372 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
SIN3B-204ENST00000594372 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
SIN3B-204ENST00000594372 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
SIN3B-204ENST00000594372 CHD1O14646 1710 aa23.06■■□□□ 1.28
SIN3B-204ENST00000594372 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
SIN3B-204ENST00000594372 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
SIN3B-204ENST00000594372 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
SIN3B-204ENST00000594372 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.26
SIN3B-204ENST00000594372 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
SIN3B-204ENST00000594372 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
SIN3B-204ENST00000594372 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
SIN3B-204ENST00000594372 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
SIN3B-204ENST00000594372 FBLN2P98095 1184 aa22.84■■□□□ 1.25
SIN3B-204ENST00000594372 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
SIN3B-204ENST00000594372 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
SIN3B-204ENST00000594372 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
SIN3B-204ENST00000594372 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
SIN3B-204ENST00000594372 SOGA1O94964 1423 aa22.7■■□□□ 1.22
SIN3B-204ENST00000594372 TRHP20396 242 aaPredicted RBP22.69■■□□□ 1.22
SIN3B-204ENST00000594372 CUX1P39880 1505 aa22.67■■□□□ 1.22
SIN3B-204ENST00000594372 CLASP1Q7Z460 1538 aa22.63■■□□□ 1.21
SIN3B-204ENST00000594372 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
SIN3B-204ENST00000594372 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
SIN3B-204ENST00000594372 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
SIN3B-204ENST00000594372 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
SIN3B-204ENST00000594372 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
SIN3B-204ENST00000594372 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
SIN3B-204ENST00000594372 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
SIN3B-204ENST00000594372 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
SIN3B-204ENST00000594372 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
SIN3B-204ENST00000594372 ERCC6L2Q5T890 1561 aa22.4■■□□□ 1.18
SIN3B-204ENST00000594372 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
SIN3B-204ENST00000594372 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
SIN3B-204ENST00000594372 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
SIN3B-204ENST00000594372 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
SIN3B-204ENST00000594372 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
SIN3B-204ENST00000594372 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
SIN3B-204ENST00000594372 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
SIN3B-204ENST00000594372 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
SIN3B-204ENST00000594372 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SIN3B-204ENST00000594372 NUP160Q12769 1436 aa22.16■■□□□ 1.14
SIN3B-204ENST00000594372 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
SIN3B-204ENST00000594372 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
SIN3B-204ENST00000594372 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
SIN3B-204ENST00000594372 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SIN3B-204ENST00000594372 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.12
SIN3B-204ENST00000594372 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms