RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
LDLRAD4-219ENST00000593236 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
LDLRAD4-219ENST00000593236 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
LDLRAD4-219ENST00000593236 IGF1RP08069 1367 aa21.46■■□□□ 1.03
LDLRAD4-219ENST00000593236 KIAA0586Q9BVV6 1533 aa21.4■■□□□ 1.02
LDLRAD4-219ENST00000593236 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.02
LDLRAD4-219ENST00000593236 FAM69CQ0P6D2 419 aa21.39■■□□□ 1.01
LDLRAD4-219ENST00000593236 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
LDLRAD4-219ENST00000593236 ADCY10Q96PN6 1610 aa21.37■■□□□ 1.01
LDLRAD4-219ENST00000593236 MAPKBP1O60336 1514 aa21.35■■□□□ 1.01
LDLRAD4-219ENST00000593236 CUL7Q14999 1698 aa21.35■■□□□ 1.01
LDLRAD4-219ENST00000593236 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
LDLRAD4-219ENST00000593236 DIP2BQ9P265 1576 aa21.3■■□□□ 1
LDLRAD4-219ENST00000593236 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
LDLRAD4-219ENST00000593236 EEA1Q15075 1411 aa21.27■■□□□ 1
LDLRAD4-219ENST00000593236 PTPRGP23470 1445 aa21.24■□□□□ 0.99
LDLRAD4-219ENST00000593236 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
LDLRAD4-219ENST00000593236 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
LDLRAD4-219ENST00000593236 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
LDLRAD4-219ENST00000593236 TSPOAP1O95153 1857 aa21.18■□□□□ 0.98
LDLRAD4-219ENST00000593236 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
LDLRAD4-219ENST00000593236 KDM6BO15054 1643 aa21.15■□□□□ 0.98
LDLRAD4-219ENST00000593236 IQGAP2Q13576 1575 aa21.14■□□□□ 0.98
LDLRAD4-219ENST00000593236 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
LDLRAD4-219ENST00000593236 ABCC2Q92887 1545 aa21.14■□□□□ 0.97
LDLRAD4-219ENST00000593236 RAPGEF2Q9Y4G8 1499 aa21.13■□□□□ 0.97
LDLRAD4-219ENST00000593236 DISP1Q96F81 1524 aa21.09■□□□□ 0.97
LDLRAD4-219ENST00000593236 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
LDLRAD4-219ENST00000593236 UHRF1BP1LA0JNW5 1464 aa21.08■□□□□ 0.97
LDLRAD4-219ENST00000593236 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.97
LDLRAD4-219ENST00000593236 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
LDLRAD4-219ENST00000593236 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
LDLRAD4-219ENST00000593236 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
LDLRAD4-219ENST00000593236 KIF21BO75037 1637 aa21.06■□□□□ 0.96
LDLRAD4-219ENST00000593236 GLI2P10070 1586 aa21.05■□□□□ 0.96
LDLRAD4-219ENST00000593236 UGGT2Q9NYU1 1516 aa21.03■□□□□ 0.96
LDLRAD4-219ENST00000593236 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.96
LDLRAD4-219ENST00000593236 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
LDLRAD4-219ENST00000593236 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
LDLRAD4-219ENST00000593236 KIAA0556O60303 1618 aa20.96■□□□□ 0.95
LDLRAD4-219ENST00000593236 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
LDLRAD4-219ENST00000593236 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
LDLRAD4-219ENST00000593236 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
LDLRAD4-219ENST00000593236 MAP3K4Q9Y6R4 1608 aa20.93■□□□□ 0.94
LDLRAD4-219ENST00000593236 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
LDLRAD4-219ENST00000593236 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
LDLRAD4-219ENST00000593236 TEX14Q8IWB6 1497 aa20.85■□□□□ 0.93
LDLRAD4-219ENST00000593236 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
LDLRAD4-219ENST00000593236 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
LDLRAD4-219ENST00000593236 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
LDLRAD4-219ENST00000593236 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
LDLRAD4-219ENST00000593236 ABCA8O94911 1581 aa20.8■□□□□ 0.92
LDLRAD4-219ENST00000593236 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
LDLRAD4-219ENST00000593236 CD109Q6YHK3 1445 aa20.75■□□□□ 0.91
LDLRAD4-219ENST00000593236 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
LDLRAD4-219ENST00000593236 CFAP43Q8NDM7 1665 aa20.73■□□□□ 0.91
LDLRAD4-219ENST00000593236 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
LDLRAD4-219ENST00000593236 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
LDLRAD4-219ENST00000593236 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
LDLRAD4-219ENST00000593236 ATP10BO94823 1461 aa20.66■□□□□ 0.9
LDLRAD4-219ENST00000593236 EFCAB5A4FU69 1503 aa20.64■□□□□ 0.9
LDLRAD4-219ENST00000593236 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
LDLRAD4-219ENST00000593236 CLIP1P30622 1438 aa20.62■□□□□ 0.89
LDLRAD4-219ENST00000593236 FHOD3Q2V2M9 1422 aa20.62■□□□□ 0.89
LDLRAD4-219ENST00000593236 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
LDLRAD4-219ENST00000593236 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
LDLRAD4-219ENST00000593236 HECW2Q9P2P5 1572 aa20.59■□□□□ 0.89
LDLRAD4-219ENST00000593236 ARAP3Q8WWN8 1544 aa20.58■□□□□ 0.89
LDLRAD4-219ENST00000593236 ABCA9Q8IUA7 1624 aa20.55■□□□□ 0.88
LDLRAD4-219ENST00000593236 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
LDLRAD4-219ENST00000593236 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
LDLRAD4-219ENST00000593236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.51■□□□□ 0.87
LDLRAD4-219ENST00000593236 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
LDLRAD4-219ENST00000593236 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
LDLRAD4-219ENST00000593236 NUP153P49790 1475 aaKnown RBP20.48■□□□□ 0.87
LDLRAD4-219ENST00000593236 NEO1Q92859 1461 aa20.45■□□□□ 0.86
LDLRAD4-219ENST00000593236 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
LDLRAD4-219ENST00000593236 PLEKHD1A6NEE1 506 aa20.4■□□□□ 0.86
LDLRAD4-219ENST00000593236 ADAMTSL3P82987 1691 aa20.4■□□□□ 0.86
LDLRAD4-219ENST00000593236 FRMPD1Q5SYB0 1578 aa20.4■□□□□ 0.86
LDLRAD4-219ENST00000593236 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
LDLRAD4-219ENST00000593236 PTPRMP28827 1452 aa20.37■□□□□ 0.85
LDLRAD4-219ENST00000593236 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
LDLRAD4-219ENST00000593236 BCORL1Q5H9F3 1711 aa20.33■□□□□ 0.85
LDLRAD4-219ENST00000593236 HECW1Q76N89 1606 aa20.33■□□□□ 0.84
LDLRAD4-219ENST00000593236 AKNAQ7Z591 1439 aa20.33■□□□□ 0.84
LDLRAD4-219ENST00000593236 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
LDLRAD4-219ENST00000593236 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
LDLRAD4-219ENST00000593236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
LDLRAD4-219ENST00000593236 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
LDLRAD4-219ENST00000593236 DENND4BO75064 1496 aaPredicted RBP20.31■□□□□ 0.84
LDLRAD4-219ENST00000593236 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
LDLRAD4-219ENST00000593236 RICTORQ6R327 1708 aa20.3■□□□□ 0.84
LDLRAD4-219ENST00000593236 FANCAO15360 1455 aa20.3■□□□□ 0.84
LDLRAD4-219ENST00000593236 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
LDLRAD4-219ENST00000593236 CDK13Q14004 1512 aaKnown RBP20.28■□□□□ 0.84
LDLRAD4-219ENST00000593236 TTC37Q6PGP7 1564 aa20.28■□□□□ 0.84
LDLRAD4-219ENST00000593236 ARHGEF40Q8TER5 1519 aa20.27■□□□□ 0.83
LDLRAD4-219ENST00000593236 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
LDLRAD4-219ENST00000593236 LRRIQ1Q96JM4 1722 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms