RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
LDLRAD4-219ENST00000593236 ABCC9O60706 1549 aa27.75■■■□□ 2.03
LDLRAD4-219ENST00000593236 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
LDLRAD4-219ENST00000593236 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
LDLRAD4-219ENST00000593236 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
LDLRAD4-219ENST00000593236 NACADO15069 1562 aa26.12■■□□□ 1.77
LDLRAD4-219ENST00000593236 DCAF8L2P0C7V8 631 aa26.01■■□□□ 1.75
LDLRAD4-219ENST00000593236 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
LDLRAD4-219ENST00000593236 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
LDLRAD4-219ENST00000593236 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
LDLRAD4-219ENST00000593236 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
LDLRAD4-219ENST00000593236 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
LDLRAD4-219ENST00000593236 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.65
LDLRAD4-219ENST00000593236 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
LDLRAD4-219ENST00000593236 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
LDLRAD4-219ENST00000593236 CC2D2AQ9P2K1 1620 aa25.05■■□□□ 1.6
LDLRAD4-219ENST00000593236 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
LDLRAD4-219ENST00000593236 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
LDLRAD4-219ENST00000593236 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
LDLRAD4-219ENST00000593236 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
LDLRAD4-219ENST00000593236 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
LDLRAD4-219ENST00000593236 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
LDLRAD4-219ENST00000593236 CUX2O14529 1486 aa23.94■■□□□ 1.42
LDLRAD4-219ENST00000593236 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
LDLRAD4-219ENST00000593236 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
LDLRAD4-219ENST00000593236 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
LDLRAD4-219ENST00000593236 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
LDLRAD4-219ENST00000593236 NESP48681 1621 aa23.81■■□□□ 1.4
LDLRAD4-219ENST00000593236 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
LDLRAD4-219ENST00000593236 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
LDLRAD4-219ENST00000593236 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
LDLRAD4-219ENST00000593236 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.37
LDLRAD4-219ENST00000593236 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
LDLRAD4-219ENST00000593236 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
LDLRAD4-219ENST00000593236 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
LDLRAD4-219ENST00000593236 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
LDLRAD4-219ENST00000593236 WIZO95785 1651 aa23.38■■□□□ 1.33
LDLRAD4-219ENST00000593236 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
LDLRAD4-219ENST00000593236 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
LDLRAD4-219ENST00000593236 WDR62O43379 1518 aa23.21■■□□□ 1.31
LDLRAD4-219ENST00000593236 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
LDLRAD4-219ENST00000593236 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
LDLRAD4-219ENST00000593236 CFTRP13569 1480 aa23.1■■□□□ 1.29
LDLRAD4-219ENST00000593236 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
LDLRAD4-219ENST00000593236 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
LDLRAD4-219ENST00000593236 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
LDLRAD4-219ENST00000593236 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
LDLRAD4-219ENST00000593236 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
LDLRAD4-219ENST00000593236 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
LDLRAD4-219ENST00000593236 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
LDLRAD4-219ENST00000593236 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
LDLRAD4-219ENST00000593236 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
LDLRAD4-219ENST00000593236 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
LDLRAD4-219ENST00000593236 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
LDLRAD4-219ENST00000593236 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
LDLRAD4-219ENST00000593236 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
LDLRAD4-219ENST00000593236 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
LDLRAD4-219ENST00000593236 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
LDLRAD4-219ENST00000593236 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
LDLRAD4-219ENST00000593236 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
LDLRAD4-219ENST00000593236 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.19
LDLRAD4-219ENST00000593236 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
LDLRAD4-219ENST00000593236 POLA1P09884 1462 aaPredicted RBP22.42■■□□□ 1.18
LDLRAD4-219ENST00000593236 CHD1O14646 1710 aa22.4■■□□□ 1.18
LDLRAD4-219ENST00000593236 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
LDLRAD4-219ENST00000593236 CYB5RLQ6IPT4 315 aa22.36■■□□□ 1.17
LDLRAD4-219ENST00000593236 FBLN2P98095 1184 aa22.35■■□□□ 1.17
LDLRAD4-219ENST00000593236 SOGA1O94964 1423 aa22.34■■□□□ 1.17
LDLRAD4-219ENST00000593236 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
LDLRAD4-219ENST00000593236 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
LDLRAD4-219ENST00000593236 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
LDLRAD4-219ENST00000593236 CUX1P39880 1505 aa22.23■■□□□ 1.15
LDLRAD4-219ENST00000593236 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
LDLRAD4-219ENST00000593236 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
LDLRAD4-219ENST00000593236 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
LDLRAD4-219ENST00000593236 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
LDLRAD4-219ENST00000593236 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
LDLRAD4-219ENST00000593236 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
LDLRAD4-219ENST00000593236 TRHP20396 242 aaPredicted RBP22.13■■□□□ 1.13
LDLRAD4-219ENST00000593236 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
LDLRAD4-219ENST00000593236 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
LDLRAD4-219ENST00000593236 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
LDLRAD4-219ENST00000593236 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
LDLRAD4-219ENST00000593236 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
LDLRAD4-219ENST00000593236 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
LDLRAD4-219ENST00000593236 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
LDLRAD4-219ENST00000593236 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
LDLRAD4-219ENST00000593236 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
LDLRAD4-219ENST00000593236 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
LDLRAD4-219ENST00000593236 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
LDLRAD4-219ENST00000593236 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
LDLRAD4-219ENST00000593236 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
LDLRAD4-219ENST00000593236 NUP160Q12769 1436 aa21.79■■□□□ 1.08
LDLRAD4-219ENST00000593236 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
LDLRAD4-219ENST00000593236 ERICH3Q5RHP9 1530 aa21.71■■□□□ 1.07
LDLRAD4-219ENST00000593236 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
LDLRAD4-219ENST00000593236 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
LDLRAD4-219ENST00000593236 JPH4Q96JJ6 628 aa21.6■■□□□ 1.05
LDLRAD4-219ENST00000593236 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
LDLRAD4-219ENST00000593236 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms