RNA–Protein interactions for RNA: ENST00000592618.5

TMEM259-210, Transcript of transmembrane protein 259, humanhuman

TSL 5

Gene TMEM259, Length 1,877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-210ENST00000592618 ADAMTS12P58397 1594 aa38.36■■■■□ 3.73
TMEM259-210ENST00000592618 EIF4G3O43432 1585 aaKnown RBP38.32■■■■□ 3.73
TMEM259-210ENST00000592618 HRCP23327 699 aa38.3■■■■□ 3.72
TMEM259-210ENST00000592618 EFCAB5A4FU69 1503 aa38.22■■■■□ 3.71
TMEM259-210ENST00000592618 APLP2Q06481 763 aa38.17■■■■□ 3.7
TMEM259-210ENST00000592618 SNAPC4Q5SXM2 1469 aa38.15■■■■□ 3.7
TMEM259-210ENST00000592618 MAGI1Q96QZ7 1491 aaPredicted RBP38.12■■■■□ 3.69
TMEM259-210ENST00000592618 SAMD9Q5K651 1589 aa38.05■■■■□ 3.68
TMEM259-210ENST00000592618 GRIN2AQ12879 1464 aa38■■■■□ 3.67
TMEM259-210ENST00000592618 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
TMEM259-210ENST00000592618 FHOD3Q2V2M9 1422 aa37.98■■■■□ 3.67
TMEM259-210ENST00000592618 IQGAP2Q13576 1575 aa37.98■■■■□ 3.67
TMEM259-210ENST00000592618 SYNJ2O15056 1496 aa37.97■■■■□ 3.67
TMEM259-210ENST00000592618 P3H3Q8IVL6 736 aa37.94■■■■□ 3.66
TMEM259-210ENST00000592618 MAP3K1Q13233 1512 aa37.94■■■■□ 3.66
TMEM259-210ENST00000592618 KIAA0586Q9BVV6 1533 aa37.9■■■■□ 3.66
TMEM259-210ENST00000592618 FMN1Q68DA7 1419 aa37.88■■■■□ 3.65
TMEM259-210ENST00000592618 PCF11O94913 1555 aaKnown RBP37.85■■■■□ 3.65
TMEM259-210ENST00000592618 CASKIN1Q8WXD9 1431 aa37.84■■■■□ 3.65
TMEM259-210ENST00000592618 UGGT2Q9NYU1 1516 aa37.84■■■■□ 3.65
TMEM259-210ENST00000592618 CHMP7Q8WUX9 453 aaPredicted RBP37.84■■■■□ 3.65
TMEM259-210ENST00000592618 FYCO1Q9BQS8 1478 aa37.83■■■■□ 3.65
TMEM259-210ENST00000592618 KANK4Q5T7N3 995 aaPredicted RBP37.83■■■■□ 3.65
TMEM259-210ENST00000592618 TIAM1Q13009 1591 aa37.82■■■■□ 3.64
TMEM259-210ENST00000592618 CEP170Q5SW79 1584 aa37.74■■■■□ 3.63
TMEM259-210ENST00000592618 NUP160Q12769 1436 aa37.73■■■■□ 3.63
TMEM259-210ENST00000592618 CFAP43Q8NDM7 1665 aa37.72■■■■□ 3.63
TMEM259-210ENST00000592618 FBLN2P98095 1184 aa37.65■■■■□ 3.62
TMEM259-210ENST00000592618 LRRC9Q6ZRR7 1453 aa37.65■■■■□ 3.62
TMEM259-210ENST00000592618 DISP1Q96F81 1524 aa37.61■■■■□ 3.61
TMEM259-210ENST00000592618 KIAA0556O60303 1618 aa37.59■■■■□ 3.61
TMEM259-210ENST00000592618 ATP1B4Q9UN42 357 aaPredicted RBP37.54■■■■□ 3.6
TMEM259-210ENST00000592618 RRBP1Q9P2E9 1410 aaKnown RBP37.52■■■■□ 3.6
TMEM259-210ENST00000592618 LRRIQ1Q96JM4 1722 aa37.49■■■■□ 3.59
TMEM259-210ENST00000592618 CHD1O14646 1710 aa37.45■■■■□ 3.59
TMEM259-210ENST00000592618 JPH4Q96JJ6 628 aa37.44■■■■□ 3.58
TMEM259-210ENST00000592618 HECW1Q76N89 1606 aa37.43■■■■□ 3.58
TMEM259-210ENST00000592618 CCDC18Q5T9S5 1454 aa37.4■■■■□ 3.58
TMEM259-210ENST00000592618 CARMIL2Q6F5E8 1435 aa37.38■■■■□ 3.57
TMEM259-210ENST00000592618 CCNB3Q8WWL7 1395 aa37.34■■■■□ 3.57
TMEM259-210ENST00000592618 EPRSP07814 1512 aaKnown RBP37.31■■■■□ 3.56
TMEM259-210ENST00000592618 PHLDB1Q86UU1 1377 aa37.3■■■■□ 3.56
TMEM259-210ENST00000592618 ZEB1P37275 1124 aaPredicted RBP37.3■■■■□ 3.56
TMEM259-210ENST00000592618 HNRNPUL2Q1KMD3 747 aaKnown RBP37.29■■■■□ 3.56
TMEM259-210ENST00000592618 MTUS2Q5JR59 1369 aa37.28■■■■□ 3.56
TMEM259-210ENST00000592618 RAPGEF6Q8TEU7 1601 aa37.25■■■■□ 3.55
TMEM259-210ENST00000592618 EHBP1L1Q8N3D4 1523 aa37.25■■■■□ 3.55
TMEM259-210ENST00000592618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.2■■■■□ 3.55
TMEM259-210ENST00000592618 NUP153P49790 1475 aaKnown RBP37.19■■■■□ 3.54
TMEM259-210ENST00000592618 SHROOM2Q13796 1616 aa37.19■■■■□ 3.54
TMEM259-210ENST00000592618 MAGI3Q5TCQ9 1506 aa37.18■■■■□ 3.54
TMEM259-210ENST00000592618 PRG4Q92954 1404 aaPredicted RBP37.16■■■■□ 3.54
TMEM259-210ENST00000592618 CDK13Q14004 1512 aaKnown RBP37.15■■■■□ 3.54
TMEM259-210ENST00000592618 SUPT6HQ7KZ85 1726 aaKnown RBP37.15■■■■□ 3.54
TMEM259-210ENST00000592618 NCOA2Q15596 1464 aa37.12■■■■□ 3.53
TMEM259-210ENST00000592618 ARHGEF11O15085 1522 aa37.11■■■■□ 3.53
TMEM259-210ENST00000592618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.1■■■■□ 3.531e-6■□□□□ 10.8
TMEM259-210ENST00000592618 CCER1Q8TC90 406 aaPredicted RBP37.1■■■■□ 3.53
TMEM259-210ENST00000592618 PLB1Q6P1J6 1458 aa37.1■■■■□ 3.53
TMEM259-210ENST00000592618 CLASP1Q7Z460 1538 aa37.06■■■■□ 3.52
TMEM259-210ENST00000592618 ABCA8O94911 1581 aa37.05■■■■□ 3.52
TMEM259-210ENST00000592618 FGD6Q6ZV73 1430 aa37.03■■■■□ 3.52
TMEM259-210ENST00000592618 MYOM3Q5VTT5 1437 aa37.01■■■■□ 3.52
TMEM259-210ENST00000592618 PTPRGP23470 1445 aa36.97■■■■□ 3.51
TMEM259-210ENST00000592618 CDK11AQ9UQ88 783 aaPredicted RBP36.96■■■■□ 3.51
TMEM259-210ENST00000592618 ARID3CA6NKF2 412 aa36.94■■■■□ 3.5
TMEM259-210ENST00000592618 FAM50AQ14320 339 aaKnown RBP36.93■■■■□ 3.5
TMEM259-210ENST00000592618 ITGAEP38570 1179 aa36.85■■■■□ 3.49
TMEM259-210ENST00000592618 TROQ12816 1431 aaPredicted RBP36.85■■■■□ 3.49
TMEM259-210ENST00000592618 ERCC6L2Q5T890 1561 aa36.84■■■■□ 3.49
TMEM259-210ENST00000592618 ATP10BO94823 1461 aa36.82■■■■□ 3.48
TMEM259-210ENST00000592618 MIA2Q96PC5 1412 aa36.81■■■■□ 3.48
TMEM259-210ENST00000592618 PTPN23Q9H3S7 1636 aa36.8■■■■□ 3.48
TMEM259-210ENST00000592618 TCOF1Q13428 1488 aaKnown RBP36.8■■■■□ 3.48
TMEM259-210ENST00000592618 UACAQ9BZF9 1416 aa36.77■■■■□ 3.48
TMEM259-210ENST00000592618 ADCY10Q96PN6 1610 aa36.77■■■■□ 3.48
TMEM259-210ENST00000592618 SETD5Q9C0A6 1442 aa36.71■■■■□ 3.47
TMEM259-210ENST00000592618 PLEKHD1A6NEE1 506 aa36.67■■■■□ 3.46
TMEM259-210ENST00000592618 RAB3GAP2Q9H2M9 1393 aa36.66■■■■□ 3.46
TMEM259-210ENST00000592618 ABCC2Q92887 1545 aa36.66■■■■□ 3.46
TMEM259-210ENST00000592618 DHX57Q6P158 1386 aaKnown RBP36.65■■■■□ 3.46
TMEM259-210ENST00000592618 CLSPNQ9HAW4 1339 aa36.63■■■■□ 3.45
TMEM259-210ENST00000592618 KIF14Q15058 1648 aa36.63■■■■□ 3.45
TMEM259-210ENST00000592618 PTPRKQ15262 1439 aa36.63■■■■□ 3.45
TMEM259-210ENST00000592618 UHRF1BP1LA0JNW5 1464 aa36.58■■■■□ 3.45
TMEM259-210ENST00000592618 ITSN2Q9NZM3 1697 aa36.57■■■■□ 3.45
TMEM259-210ENST00000592618 OSCARQ8IYS5 282 aa36.57■■■■□ 3.44
TMEM259-210ENST00000592618 GPATCH8Q9UKJ3 1502 aaKnown RBP36.56■■■■□ 3.44
TMEM259-210ENST00000592618 ABCC10Q5T3U5 1492 aa36.54■■■■□ 3.44
TMEM259-210ENST00000592618 HFM1A2PYH4 1435 aa36.52■■■■□ 3.44
TMEM259-210ENST00000592618 KDM5BQ9UGL1 1544 aa36.44■■■■□ 3.42
TMEM259-210ENST00000592618 CFDP1Q9UEE9 299 aaPredicted RBP36.43■■■■□ 3.42
TMEM259-210ENST00000592618 AKNAQ7Z591 1439 aa36.43■■■■□ 3.42
TMEM259-210ENST00000592618 CDC42BPAQ5VT25 1732 aa36.43■■■■□ 3.42
TMEM259-210ENST00000592618 NAIPQ13075 1403 aa36.42■■■■□ 3.42
TMEM259-210ENST00000592618 DNMT1P26358 1616 aaKnown RBP36.42■■■■□ 3.42
TMEM259-210ENST00000592618 ZNF644Q9H582 1327 aaPredicted RBP36.39■■■■□ 3.42
TMEM259-210ENST00000592618 CAMSAP2Q08AD1 1489 aa36.38■■■■□ 3.42
TMEM259-210ENST00000592618 DAPK1P53355 1430 aa36.38■■■■□ 3.41
TMEM259-210ENST00000592618 ZCCHC11Q5TAX3 1644 aaKnown RBP36.38■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms