RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
CXXC1-214ENST00000590901 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
CXXC1-214ENST00000590901 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
CXXC1-214ENST00000590901 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CXXC1-214ENST00000590901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
CXXC1-214ENST00000590901 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
CXXC1-214ENST00000590901 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
CXXC1-214ENST00000590901 APLP2Q06481 763 aa23.35■■□□□ 1.33
CXXC1-214ENST00000590901 WDR62O43379 1518 aa23.34■■□□□ 1.33
CXXC1-214ENST00000590901 CUL7Q14999 1698 aa23.33■■□□□ 1.33
CXXC1-214ENST00000590901 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
CXXC1-214ENST00000590901 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
CXXC1-214ENST00000590901 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
CXXC1-214ENST00000590901 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
CXXC1-214ENST00000590901 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
CXXC1-214ENST00000590901 IFT140Q96RY7 1462 aa23.22■■□□□ 1.31
CXXC1-214ENST00000590901 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
CXXC1-214ENST00000590901 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
CXXC1-214ENST00000590901 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.3
CXXC1-214ENST00000590901 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.29
CXXC1-214ENST00000590901 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
CXXC1-214ENST00000590901 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
CXXC1-214ENST00000590901 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
CXXC1-214ENST00000590901 FBLN2P98095 1184 aa23.06■■□□□ 1.28
CXXC1-214ENST00000590901 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
CXXC1-214ENST00000590901 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
CXXC1-214ENST00000590901 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
CXXC1-214ENST00000590901 SAMD9Q5K651 1589 aa23.02■■□□□ 1.28
CXXC1-214ENST00000590901 ARID3CA6NKF2 412 aa22.99■■□□□ 1.27
CXXC1-214ENST00000590901 ITGAEP38570 1179 aa22.99■■□□□ 1.27
CXXC1-214ENST00000590901 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
CXXC1-214ENST00000590901 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
CXXC1-214ENST00000590901 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
CXXC1-214ENST00000590901 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
CXXC1-214ENST00000590901 IQGAP2Q13576 1575 aa22.96■■□□□ 1.27
CXXC1-214ENST00000590901 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
CXXC1-214ENST00000590901 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
CXXC1-214ENST00000590901 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
CXXC1-214ENST00000590901 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
CXXC1-214ENST00000590901 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
CXXC1-214ENST00000590901 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
CXXC1-214ENST00000590901 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
CXXC1-214ENST00000590901 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
CXXC1-214ENST00000590901 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
CXXC1-214ENST00000590901 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
CXXC1-214ENST00000590901 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
CXXC1-214ENST00000590901 KIAA0586Q9BVV6 1533 aa22.85■■□□□ 1.25
CXXC1-214ENST00000590901 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
CXXC1-214ENST00000590901 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
CXXC1-214ENST00000590901 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
CXXC1-214ENST00000590901 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
CXXC1-214ENST00000590901 MAGI3Q5TCQ9 1506 aa22.8■■□□□ 1.24
CXXC1-214ENST00000590901 MIER1Q8N108 512 aa22.79■■□□□ 1.24
CXXC1-214ENST00000590901 CDK13Q14004 1512 aaKnown RBP22.76■■□□□ 1.23
CXXC1-214ENST00000590901 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
CXXC1-214ENST00000590901 JPH4Q96JJ6 628 aa22.75■■□□□ 1.23
CXXC1-214ENST00000590901 KIAA0556O60303 1618 aa22.74■■□□□ 1.23
CXXC1-214ENST00000590901 NUP160Q12769 1436 aa22.72■■□□□ 1.23
CXXC1-214ENST00000590901 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
CXXC1-214ENST00000590901 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
CXXC1-214ENST00000590901 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
CXXC1-214ENST00000590901 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.21
CXXC1-214ENST00000590901 NUP153P49790 1475 aaKnown RBP22.63■■□□□ 1.21
CXXC1-214ENST00000590901 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
CXXC1-214ENST00000590901 HECW1Q76N89 1606 aa22.61■■□□□ 1.21
CXXC1-214ENST00000590901 CHD1O14646 1710 aa22.61■■□□□ 1.21
CXXC1-214ENST00000590901 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
CXXC1-214ENST00000590901 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
CXXC1-214ENST00000590901 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
CXXC1-214ENST00000590901 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
CXXC1-214ENST00000590901 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
CXXC1-214ENST00000590901 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
CXXC1-214ENST00000590901 MYOM3Q5VTT5 1437 aa22.54■■□□□ 1.2
CXXC1-214ENST00000590901 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
CXXC1-214ENST00000590901 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
CXXC1-214ENST00000590901 ARHGEF11O15085 1522 aa22.52■■□□□ 1.2
CXXC1-214ENST00000590901 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
CXXC1-214ENST00000590901 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
CXXC1-214ENST00000590901 ZNF644Q9H582 1327 aaPredicted RBP22.49■■□□□ 1.19
CXXC1-214ENST00000590901 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
CXXC1-214ENST00000590901 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
CXXC1-214ENST00000590901 PTPN23Q9H3S7 1636 aa22.44■■□□□ 1.18
CXXC1-214ENST00000590901 SUPT16HQ9Y5B9 1047 aaKnown RBP22.43■■□□□ 1.18
CXXC1-214ENST00000590901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.182e-6■■■■□ 21.4
CXXC1-214ENST00000590901 RRP7BPQ9NSQ0 103 aa22.41■■□□□ 1.18
CXXC1-214ENST00000590901 MAPKBP1O60336 1514 aa22.39■■□□□ 1.17
CXXC1-214ENST00000590901 PTPRGP23470 1445 aa22.39■■□□□ 1.17
CXXC1-214ENST00000590901 ABCA8O94911 1581 aa22.38■■□□□ 1.17
CXXC1-214ENST00000590901 KIF14Q15058 1648 aa22.38■■□□□ 1.17
CXXC1-214ENST00000590901 ATP10BO94823 1461 aa22.38■■□□□ 1.17
CXXC1-214ENST00000590901 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
CXXC1-214ENST00000590901 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
CXXC1-214ENST00000590901 NAIPQ13075 1403 aa22.32■■□□□ 1.16
CXXC1-214ENST00000590901 CDK11AQ9UQ88 783 aaPredicted RBP22.32■■□□□ 1.16
CXXC1-214ENST00000590901 TCOF1Q13428 1488 aaKnown RBP22.31■■□□□ 1.16
CXXC1-214ENST00000590901 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
CXXC1-214ENST00000590901 ZNF777Q9ULD5 760 aaPredicted RBP22.31■■□□□ 1.16
CXXC1-214ENST00000590901 ANP32EQ9BTT0 268 aa22.3■■□□□ 1.16
CXXC1-214ENST00000590901 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
CXXC1-214ENST00000590901 KDM6BO15054 1643 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms