RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, humanhuman

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-208ENST00000590526 AQRO60306 1485 aaKnown RBP eCLIP37.44■■■■□ 3.58
RTN2-208ENST00000590526 FHOD3Q2V2M9 1422 aa37.39■■■■□ 3.58
RTN2-208ENST00000590526 PBRM1Q86U86 1689 aa37.35■■■■□ 3.57
RTN2-208ENST00000590526 ATP1B4Q9UN42 357 aaPredicted RBP37.34■■■■□ 3.57
RTN2-208ENST00000590526 ZNF608Q9ULD9 1512 aaPredicted RBP37.31■■■■□ 3.56
RTN2-208ENST00000590526 ERCC6Q03468 1493 aa37.29■■■■□ 3.56
RTN2-208ENST00000590526 PELP1Q8IZL8 1130 aaKnown RBP37.26■■■■□ 3.56
RTN2-208ENST00000590526 PCF11O94913 1555 aaKnown RBP37.26■■■■□ 3.56
RTN2-208ENST00000590526 WDR62O43379 1518 aa37.24■■■■□ 3.55
RTN2-208ENST00000590526 TIAM1Q13009 1591 aa37.2■■■■□ 3.55
RTN2-208ENST00000590526 EFCAB5A4FU69 1503 aa37.11■■■■□ 3.53
RTN2-208ENST00000590526 FHAD1B1AJZ9 1412 aa37.1■■■■□ 3.53
RTN2-208ENST00000590526 IFT140Q96RY7 1462 aa37.09■■■■□ 3.53
RTN2-208ENST00000590526 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
RTN2-208ENST00000590526 THOC2Q8NI27 1593 aaKnown RBP37.09■■■■□ 3.53
RTN2-208ENST00000590526 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
RTN2-208ENST00000590526 ITGAEP38570 1179 aa37.05■■■■□ 3.52
RTN2-208ENST00000590526 LRRC9Q6ZRR7 1453 aa37.03■■■■□ 3.52
RTN2-208ENST00000590526 CFAP43Q8NDM7 1665 aa37.01■■■■□ 3.52
RTN2-208ENST00000590526 SAMD9Q5K651 1589 aa37.01■■■■□ 3.52
RTN2-208ENST00000590526 RRBP1Q9P2E9 1410 aaKnown RBP37■■■■□ 3.51
RTN2-208ENST00000590526 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
RTN2-208ENST00000590526 MAP3K1Q13233 1512 aa36.95■■■■□ 3.51
RTN2-208ENST00000590526 LRRIQ1Q96JM4 1722 aa36.95■■■■□ 3.5
RTN2-208ENST00000590526 CASKIN1Q8WXD9 1431 aa36.94■■■■□ 3.5
RTN2-208ENST00000590526 CCNB3Q8WWL7 1395 aa36.94■■■■□ 3.5
RTN2-208ENST00000590526 FYCO1Q9BQS8 1478 aa36.94■■■■□ 3.5
RTN2-208ENST00000590526 SNAPC4Q5SXM2 1469 aa36.93■■■■□ 3.5
RTN2-208ENST00000590526 PHLDB1Q86UU1 1377 aa36.93■■■■□ 3.5
RTN2-208ENST00000590526 FMN1Q68DA7 1419 aa36.87■■■■□ 3.49
RTN2-208ENST00000590526 IQGAP2Q13576 1575 aa36.86■■■■□ 3.49
RTN2-208ENST00000590526 ARID3CA6NKF2 412 aa36.76■■■■□ 3.47
RTN2-208ENST00000590526 FBLN2P98095 1184 aa36.76■■■■□ 3.47
RTN2-208ENST00000590526 FAM50AQ14320 339 aaKnown RBP36.76■■■■□ 3.47
RTN2-208ENST00000590526 GRIN2AQ12879 1464 aa36.7■■■■□ 3.47
RTN2-208ENST00000590526 MTUS2Q5JR59 1369 aa36.64■■■■□ 3.46
RTN2-208ENST00000590526 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
RTN2-208ENST00000590526 DHX57Q6P158 1386 aaKnown RBP36.62■■■■□ 3.45
RTN2-208ENST00000590526 MAGI3Q5TCQ9 1506 aa36.57■■■■□ 3.44
RTN2-208ENST00000590526 KIAA0586Q9BVV6 1533 aa36.57■■■■□ 3.44
RTN2-208ENST00000590526 UGGT2Q9NYU1 1516 aa36.57■■■■□ 3.44
RTN2-208ENST00000590526 CEP170Q5SW79 1584 aa36.57■■■■□ 3.44
RTN2-208ENST00000590526 MAGI1Q96QZ7 1491 aaPredicted RBP36.55■■■■□ 3.44
RTN2-208ENST00000590526 DISP1Q96F81 1524 aa36.54■■■■□ 3.44
RTN2-208ENST00000590526 CDK13Q14004 1512 aaKnown RBP36.53■■■■□ 3.44
RTN2-208ENST00000590526 SYNJ2O15056 1496 aa36.52■■■■□ 3.44
RTN2-208ENST00000590526 KIAA0556O60303 1618 aa36.5■■■■□ 3.43
RTN2-208ENST00000590526 RAB3GAP2Q9H2M9 1393 aa36.49■■■■□ 3.43
RTN2-208ENST00000590526 NCOA2Q15596 1464 aa36.47■■■■□ 3.43
RTN2-208ENST00000590526 HECW1Q76N89 1606 aa36.45■■■■□ 3.43
RTN2-208ENST00000590526 FGD6Q6ZV73 1430 aa36.43■■■■□ 3.42
RTN2-208ENST00000590526 EPRSP07814 1512 aaKnown RBP36.43■■■■□ 3.42
RTN2-208ENST00000590526 SUPT6HQ7KZ85 1726 aaKnown RBP36.41■■■■□ 3.42
RTN2-208ENST00000590526 EHBP1L1Q8N3D4 1523 aa36.37■■■■□ 3.41
RTN2-208ENST00000590526 CCDC18Q5T9S5 1454 aa36.35■■■■□ 3.41
RTN2-208ENST00000590526 SETD5Q9C0A6 1442 aa36.35■■■■□ 3.41
RTN2-208ENST00000590526 MYOM3Q5VTT5 1437 aa36.3■■■■□ 3.4
RTN2-208ENST00000590526 PTPRKQ15262 1439 aa36.29■■■■□ 3.4
RTN2-208ENST00000590526 JPH4Q96JJ6 628 aa36.29■■■■□ 3.4
RTN2-208ENST00000590526 NUP160Q12769 1436 aa36.28■■■■□ 3.4
RTN2-208ENST00000590526 NUP153P49790 1475 aaKnown RBP36.25■■■■□ 3.39
RTN2-208ENST00000590526 RAPGEF6Q8TEU7 1601 aa36.25■■■■□ 3.39
RTN2-208ENST00000590526 PLB1Q6P1J6 1458 aa36.23■■■■□ 3.39
RTN2-208ENST00000590526 ARHGEF11O15085 1522 aa36.22■■■■□ 3.39
RTN2-208ENST00000590526 ZNF316A6NFI3 1004 aaPredicted RBP36.21■■■■□ 3.39
RTN2-208ENST00000590526 DIEXFQ68CQ4 756 aaKnown RBP36.2■■■■□ 3.39
RTN2-208ENST00000590526 PTPN23Q9H3S7 1636 aa36.2■■■■□ 3.39
RTN2-208ENST00000590526 MAPKBP1O60336 1514 aa36.19■■■■□ 3.38
RTN2-208ENST00000590526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.17■■■■□ 3.38
RTN2-208ENST00000590526 CLSPNQ9HAW4 1339 aa36.17■■■■□ 3.38
RTN2-208ENST00000590526 CHD1O14646 1710 aa36.16■■■■□ 3.38
RTN2-208ENST00000590526 CHIC2Q9UKJ5 165 aa36.11■■■■□ 3.37
RTN2-208ENST00000590526 MYT1Q01538 1121 aa36.07■■■■□ 3.36
RTN2-208ENST00000590526 SIN3AQ96ST3 1273 aa36.07■■■■□ 3.36
RTN2-208ENST00000590526 CARMIL2Q6F5E8 1435 aa36.06■■■■□ 3.36
RTN2-208ENST00000590526 PRG4Q92954 1404 aaPredicted RBP36.04■■■■□ 3.36
RTN2-208ENST00000590526 RRP7BPQ9NSQ0 103 aa36.02■■■■□ 3.36
RTN2-208ENST00000590526 NEUROD1Q13562 356 aa36■■■■□ 3.35
RTN2-208ENST00000590526 ZNF644Q9H582 1327 aaPredicted RBP35.99■■■■□ 3.35
RTN2-208ENST00000590526 NAIPQ13075 1403 aa35.95■■■■□ 3.35
RTN2-208ENST00000590526 TCOF1Q13428 1488 aaKnown RBP35.95■■■■□ 3.34
RTN2-208ENST00000590526 HFM1A2PYH4 1435 aa35.94■■■■□ 3.34
RTN2-208ENST00000590526 KIF14Q15058 1648 aa35.93■■■■□ 3.34
RTN2-208ENST00000590526 CDK11AQ9UQ88 783 aaPredicted RBP35.87■■■■□ 3.33
RTN2-208ENST00000590526 KDM6BO15054 1643 aa35.87■■■■□ 3.33
RTN2-208ENST00000590526 ABCA8O94911 1581 aa35.86■■■■□ 3.33
RTN2-208ENST00000590526 TROQ12816 1431 aaPredicted RBP35.85■■■■□ 3.33
RTN2-208ENST00000590526 MIA2Q96PC5 1412 aa35.84■■■■□ 3.33
RTN2-208ENST00000590526 ERCC6L2Q5T890 1561 aa35.83■■■■□ 3.33
RTN2-208ENST00000590526 ATP10BO94823 1461 aa35.79■■■■□ 3.32
RTN2-208ENST00000590526 ZNF777Q9ULD5 760 aaPredicted RBP35.79■■■■□ 3.32
RTN2-208ENST00000590526 PTPRGP23470 1445 aa35.77■■■■□ 3.32
RTN2-208ENST00000590526 SCAF1Q9H7N4 1312 aaKnown RBP35.76■■■■□ 3.32
RTN2-208ENST00000590526 GCC2Q8IWJ2 1684 aa35.73■■■■□ 3.31
RTN2-208ENST00000590526 UACAQ9BZF9 1416 aa35.73■■■■□ 3.31
RTN2-208ENST00000590526 DAPK1P53355 1430 aa35.71■■■■□ 3.31
RTN2-208ENST00000590526 CFDP1Q9UEE9 299 aaPredicted RBP35.71■■■■□ 3.31
RTN2-208ENST00000590526 GPATCH8Q9UKJ3 1502 aaKnown RBP35.7■■■■□ 3.31
RTN2-208ENST00000590526 ABCC5O15440 1437 aa35.7■■■■□ 3.31
RTN2-208ENST00000590526 PLEKHD1A6NEE1 506 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms