RNA–Protein interactions for RNA: ENST00000590059.5

SEPT9-227, Transcript of septin 9, human

TSL 5

Gene SEPT9, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-227	ENST00000590059	CEP170	Q5SW79	1584 aa		34.34	■■■■□ 3.09
SEPT9-227	ENST00000590059	RAPGEF2	Q9Y4G8	1499 aa		34.32	■■■■□ 3.08
SEPT9-227	ENST00000590059	PRX	Q9BXM0	1461 aa		34.26	■■■■□ 3.07
SEPT9-227	ENST00000590059	ARAP1	Q96P48	1450 aa		34.25	■■■■□ 3.07
SEPT9-227	ENST00000590059	JPH4	Q96JJ6	628 aa		34.2	■■■■□ 3.07
SEPT9-227	ENST00000590059	KIAA0586	Q9BVV6	1533 aa		34.14	■■■■□ 3.06
SEPT9-227	ENST00000590059	SHROOM2	Q13796	1616 aa		34.1	■■■■□ 3.05
SEPT9-227	ENST00000590059	PRG4	Q92954	1404 aa	Predicted RBP	34.09	■■■■□ 3.05
SEPT9-227	ENST00000590059	KIF21B	O75037	1637 aa		34.08	■■■■□ 3.05
SEPT9-227	ENST00000590059	GOLGA3	Q08378	1498 aa		34.04	■■■■□ 3.04
SEPT9-227	ENST00000590059	UBTF	P17480	764 aa	Known RBP	34.04	■■■■□ 3.04
SEPT9-227	ENST00000590059	EHMT2	Q96KQ7	1210 aa		34.01	■■■■□ 3.03
SEPT9-227	ENST00000590059	ERCC6L2	Q5T890	1561 aa		33.99	■■■■□ 3.03
SEPT9-227	ENST00000590059	IQGAP2	Q13576	1575 aa		33.87	■■■■□ 3.01
SEPT9-227	ENST00000590059	CARMIL2	Q6F5E8	1435 aa		33.87	■■■■□ 3.01
SEPT9-227	ENST00000590059	CTTNBP2	Q8WZ74	1663 aa		33.8	■■■■□ 3
SEPT9-227	ENST00000590059	TRH	P20396	242 aa	Predicted RBP	33.79	■■■■□ 3
SEPT9-227	ENST00000590059	TNIK	Q9UKE5	1360 aa		33.72	■■■□□ 2.99
SEPT9-227	ENST00000590059	PTPRG	P23470	1445 aa		33.71	■■■□□ 2.99
SEPT9-227	ENST00000590059	NPM1	P06748	294 aa	Known RBP eCLIP	33.71	■■■□□ 2.99
SEPT9-227	ENST00000590059	LOC105371045	A0A1W2PR82	267 aa		33.7	■■■□□ 2.99
SEPT9-227	ENST00000590059	RANGAP1	P46060	587 aa	Predicted RBP	33.69	■■■□□ 2.98
SEPT9-227	ENST00000590059	UGGT2	Q9NYU1	1516 aa		33.68	■■■□□ 2.98
SEPT9-227	ENST00000590059	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.67	■■■□□ 2.98
SEPT9-227	ENST00000590059	DISP1	Q96F81	1524 aa		33.61	■■■□□ 2.97
SEPT9-227	ENST00000590059	KIAA0556	O60303	1618 aa		33.51	■■■□□ 2.96
SEPT9-227	ENST00000590059	EFCAB5	A4FU69	1503 aa		33.5	■■■□□ 2.95
SEPT9-227	ENST00000590059	P3H3	Q8IVL6	736 aa		33.49	■■■□□ 2.95
SEPT9-227	ENST00000590059	ADCY10	Q96PN6	1610 aa		33.46	■■■□□ 2.95
SEPT9-227	ENST00000590059	CLIP1	P30622	1438 aa		33.45	■■■□□ 2.95
SEPT9-227	ENST00000590059	UACA	Q9BZF9	1416 aa		33.45	■■■□□ 2.95
SEPT9-227	ENST00000590059	SAMD9	Q5K651	1589 aa		33.41	■■■□□ 2.94
SEPT9-227	ENST00000590059	UHRF1BP1L	A0JNW5	1464 aa		33.4	■■■□□ 2.94
SEPT9-227	ENST00000590059	CEP162	Q5TB80	1403 aa		33.4	■■■□□ 2.94
SEPT9-227	ENST00000590059	ABCC2	Q92887	1545 aa		33.36	■■■□□ 2.93
SEPT9-227	ENST00000590059	MAPKBP1	O60336	1514 aa		33.35	■■■□□ 2.93
SEPT9-227	ENST00000590059	ARHGAP35	Q9NRY4	1499 aa		33.34	■■■□□ 2.93
SEPT9-227	ENST00000590059	FHOD3	Q2V2M9	1422 aa		33.32	■■■□□ 2.92
SEPT9-227	ENST00000590059	FMN1	Q68DA7	1419 aa		33.28	■■■□□ 2.92
SEPT9-227	ENST00000590059	FAM69C	Q0P6D2	419 aa		33.27	■■■□□ 2.92
SEPT9-227	ENST00000590059	ABCC10	Q5T3U5	1492 aa		33.24	■■■□□ 2.91
SEPT9-227	ENST00000590059	PLB1	Q6P1J6	1458 aa		33.23	■■■□□ 2.91
SEPT9-227	ENST00000590059	KDM5B	Q9UGL1	1544 aa		33.21	■■■□□ 2.91
SEPT9-227	ENST00000590059	ASXL2	Q76L83	1435 aa		33.17	■■■□□ 2.9
SEPT9-227	ENST00000590059	ABCA8	O94911	1581 aa		33.16	■■■□□ 2.9
SEPT9-227	ENST00000590059	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.13	■■■□□ 2.89
SEPT9-227	ENST00000590059	DIP2B	Q9P265	1576 aa		33.09	■■■□□ 2.89
SEPT9-227	ENST00000590059	KIF13A	Q9H1H9	1805 aa		33.08	■■■□□ 2.89
SEPT9-227	ENST00000590059	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.08	■■■□□ 2.89
SEPT9-227	ENST00000590059	RAPGEF6	Q8TEU7	1601 aa		33.03	■■■□□ 2.88
SEPT9-227	ENST00000590059	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.02	■■■□□ 2.88
SEPT9-227	ENST00000590059	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.02	■■■□□ 2.88
SEPT9-227	ENST00000590059	CASKIN1	Q8WXD9	1431 aa		32.99	■■■□□ 2.87
SEPT9-227	ENST00000590059	ARID3C	A6NKF2	412 aa		32.98	■■■□□ 2.87
SEPT9-227	ENST00000590059	VPS8	Q8N3P4	1428 aa		32.98	■■■□□ 2.87
SEPT9-227	ENST00000590059	WDR7	Q9Y4E6	1490 aa		32.98	■■■□□ 2.87
SEPT9-227	ENST00000590059	GLI2	P10070	1586 aa		32.96	■■■□□ 2.87
SEPT9-227	ENST00000590059	EPRS	P07814	1512 aa	Known RBP	32.95	■■■□□ 2.87
SEPT9-227	ENST00000590059	HECW1	Q76N89	1606 aa		32.95	■■■□□ 2.86
SEPT9-227	ENST00000590059	FYCO1	Q9BQS8	1478 aa		32.94	■■■□□ 2.86
SEPT9-227	ENST00000590059	ATP10B	O94823	1461 aa		32.93	■■■□□ 2.86
SEPT9-227	ENST00000590059	KCNH8	Q96L42	1107 aa		32.93	■■■□□ 2.86
SEPT9-227	ENST00000590059	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.92	■■■□□ 2.86
SEPT9-227	ENST00000590059	APLP2	Q06481	763 aa		32.91	■■■□□ 2.86
SEPT9-227	ENST00000590059	NUP153	P49790	1475 aa	Known RBP	32.9	■■■□□ 2.86
SEPT9-227	ENST00000590059	PCF11	O94913	1555 aa	Known RBP	32.86	■■■□□ 2.85
SEPT9-227	ENST00000590059	CCDC18	Q5T9S5	1454 aa		32.85	■■■□□ 2.85
SEPT9-227	ENST00000590059	PLEKHD1	A6NEE1	506 aa		32.84	■■■□□ 2.85
SEPT9-227	ENST00000590059	TSPOAP1	O95153	1857 aa		32.79	■■■□□ 2.84
SEPT9-227	ENST00000590059	TEX14	Q8IWB6	1497 aa		32.76	■■■□□ 2.84
SEPT9-227	ENST00000590059	CD109	Q6YHK3	1445 aa		32.75	■■■□□ 2.83
SEPT9-227	ENST00000590059	MAP3K4	Q9Y6R4	1608 aa		32.73	■■■□□ 2.83
SEPT9-227	ENST00000590059	CDK13	Q14004	1512 aa	Known RBP	32.72	■■■□□ 2.83
SEPT9-227	ENST00000590059	KDM6B	O15054	1643 aa		32.66	■■■□□ 2.82
SEPT9-227	ENST00000590059	CFAP43	Q8NDM7	1665 aa		32.66	■■■□□ 2.82
SEPT9-227	ENST00000590059	MAGI3	Q5TCQ9	1506 aa		32.63	■■■□□ 2.81
SEPT9-227	ENST00000590059	MTUS2	Q5JR59	1369 aa		32.63	■■■□□ 2.81
SEPT9-227	ENST00000590059	PPRC1	Q5VV67	1664 aa	Known RBP	32.62	■■■□□ 2.81
SEPT9-227	ENST00000590059	MAP3K1	Q13233	1512 aa		32.61	■■■□□ 2.81
SEPT9-227	ENST00000590059	TRO	Q12816	1431 aa	Predicted RBP	32.58	■■■□□ 2.81
SEPT9-227	ENST00000590059	ABCA9	Q8IUA7	1624 aa		32.55	■■■□□ 2.8
SEPT9-227	ENST00000590059	TIAM1	Q13009	1591 aa		32.55	■■■□□ 2.8
SEPT9-227	ENST00000590059	LRRIQ1	Q96JM4	1722 aa		32.52	■■■□□ 2.8
SEPT9-227	ENST00000590059	PHLDB1	Q86UU1	1377 aa		32.51	■■■□□ 2.79
SEPT9-227	ENST00000590059	EHBP1L1	Q8N3D4	1523 aa		32.46	■■■□□ 2.79
SEPT9-227	ENST00000590059	LRRC9	Q6ZRR7	1453 aa		32.45	■■■□□ 2.79
SEPT9-227	ENST00000590059	KIF14	Q15058	1648 aa		32.44	■■■□□ 2.78
SEPT9-227	ENST00000590059	NEO1	Q92859	1461 aa		32.41	■■■□□ 2.78
SEPT9-227	ENST00000590059	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.41	■■■□□ 2.78
SEPT9-227	ENST00000590059	KANK4	Q5T7N3	995 aa	Predicted RBP	32.4	■■■□□ 2.78
SEPT9-227	ENST00000590059	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
SEPT9-227	ENST00000590059	ARAP3	Q8WWN8	1544 aa		32.36	■■■□□ 2.77
SEPT9-227	ENST00000590059	CCNB3	Q8WWL7	1395 aa		32.32	■■■□□ 2.77
SEPT9-227	ENST00000590059	FANCA	O15360	1455 aa		32.3	■■■□□ 2.76
SEPT9-227	ENST00000590059	PLCH2	O75038	1416 aa		32.3	■■■□□ 2.76
SEPT9-227	ENST00000590059	TTC37	Q6PGP7	1564 aa		32.3	■■■□□ 2.76
SEPT9-227	ENST00000590059	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.3	■■■□□ 2.76
SEPT9-227	ENST00000590059	EFCAB2	Q5VUJ9	269 aa		32.28	■■■□□ 2.76
SEPT9-227	ENST00000590059	CFAP74	Q9C0B2	1584 aa		32.27	■■■□□ 2.76
SEPT9-227	ENST00000590059	AKNA	Q7Z591	1439 aa		32.26	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms