RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 NUP160Q12769 1436 aa22.4■■□□□ 1.18
NLE1-205ENST00000588642 KIAA0586Q9BVV6 1533 aa22.4■■□□□ 1.18
NLE1-205ENST00000588642 CLIP1P30622 1438 aa22.4■■□□□ 1.18
NLE1-205ENST00000588642 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
NLE1-205ENST00000588642 CHD1O14646 1710 aa22.36■■□□□ 1.17
NLE1-205ENST00000588642 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
NLE1-205ENST00000588642 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
NLE1-205ENST00000588642 IQGAP2Q13576 1575 aa22.32■■□□□ 1.16
NLE1-205ENST00000588642 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
NLE1-205ENST00000588642 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
NLE1-205ENST00000588642 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
NLE1-205ENST00000588642 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
NLE1-205ENST00000588642 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
NLE1-205ENST00000588642 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
NLE1-205ENST00000588642 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
NLE1-205ENST00000588642 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
NLE1-205ENST00000588642 CARMIL2Q6F5E8 1435 aa22.17■■□□□ 1.14
NLE1-205ENST00000588642 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
NLE1-205ENST00000588642 DISP1Q96F81 1524 aa22.14■■□□□ 1.13
NLE1-205ENST00000588642 SAMD9Q5K651 1589 aa22.13■■□□□ 1.13
NLE1-205ENST00000588642 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
NLE1-205ENST00000588642 VPS8Q8N3P4 1428 aa22.11■■□□□ 1.13
NLE1-205ENST00000588642 KIAA0556O60303 1618 aa22.07■■□□□ 1.12
NLE1-205ENST00000588642 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
NLE1-205ENST00000588642 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
NLE1-205ENST00000588642 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
NLE1-205ENST00000588642 PTPRGP23470 1445 aa22.01■■□□□ 1.11
NLE1-205ENST00000588642 APLP2Q06481 763 aa22.01■■□□□ 1.11
NLE1-205ENST00000588642 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
NLE1-205ENST00000588642 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
NLE1-205ENST00000588642 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
NLE1-205ENST00000588642 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
NLE1-205ENST00000588642 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
NLE1-205ENST00000588642 PLB1Q6P1J6 1458 aa21.88■■□□□ 1.09
NLE1-205ENST00000588642 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
NLE1-205ENST00000588642 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
NLE1-205ENST00000588642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
NLE1-205ENST00000588642 HNRNPUL2Q1KMD3 747 aaKnown RBP21.83■■□□□ 1.09
NLE1-205ENST00000588642 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
NLE1-205ENST00000588642 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
NLE1-205ENST00000588642 ABCA8O94911 1581 aa21.81■■□□□ 1.08
NLE1-205ENST00000588642 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
NLE1-205ENST00000588642 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
NLE1-205ENST00000588642 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
NLE1-205ENST00000588642 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
NLE1-205ENST00000588642 EPRSP07814 1512 aaKnown RBP21.77■■□□□ 1.08
NLE1-205ENST00000588642 MAP3K1Q13233 1512 aa21.77■■□□□ 1.08
NLE1-205ENST00000588642 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.07
NLE1-205ENST00000588642 CYB5RLQ6IPT4 315 aa21.76■■□□□ 1.07
NLE1-205ENST00000588642 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
NLE1-205ENST00000588642 TIAM1Q13009 1591 aa21.74■■□□□ 1.07
NLE1-205ENST00000588642 UHRF1BP1LA0JNW5 1464 aa21.73■■□□□ 1.07
NLE1-205ENST00000588642 ABCC2Q92887 1545 aa21.73■■□□□ 1.07
NLE1-205ENST00000588642 CDK13Q14004 1512 aaKnown RBP21.72■■□□□ 1.07
NLE1-205ENST00000588642 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
NLE1-205ENST00000588642 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
NLE1-205ENST00000588642 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
NLE1-205ENST00000588642 ATP10BO94823 1461 aa21.71■■□□□ 1.07
NLE1-205ENST00000588642 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
NLE1-205ENST00000588642 LRRC9Q6ZRR7 1453 aa21.69■■□□□ 1.06
NLE1-205ENST00000588642 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
NLE1-205ENST00000588642 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
NLE1-205ENST00000588642 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
NLE1-205ENST00000588642 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
NLE1-205ENST00000588642 KDM5BQ9UGL1 1544 aa21.62■■□□□ 1.05
NLE1-205ENST00000588642 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
NLE1-205ENST00000588642 TROQ12816 1431 aaPredicted RBP21.58■■□□□ 1.05
NLE1-205ENST00000588642 MAGI3Q5TCQ9 1506 aa21.58■■□□□ 1.04
NLE1-205ENST00000588642 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
NLE1-205ENST00000588642 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
NLE1-205ENST00000588642 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
NLE1-205ENST00000588642 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
NLE1-205ENST00000588642 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
NLE1-205ENST00000588642 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
NLE1-205ENST00000588642 ASXL2Q76L83 1435 aa21.47■■□□□ 1.03
NLE1-205ENST00000588642 CCNB3Q8WWL7 1395 aa21.46■■□□□ 1.03
NLE1-205ENST00000588642 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
NLE1-205ENST00000588642 WDR7Q9Y4E6 1490 aa21.45■■□□□ 1.02
NLE1-205ENST00000588642 KIF14Q15058 1648 aa21.41■■□□□ 1.02
NLE1-205ENST00000588642 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
NLE1-205ENST00000588642 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
NLE1-205ENST00000588642 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
NLE1-205ENST00000588642 ABCC10Q5T3U5 1492 aa21.38■■□□□ 1.01
NLE1-205ENST00000588642 CFDP1Q9UEE9 299 aaPredicted RBP21.37■■□□□ 1.01
NLE1-205ENST00000588642 FGD6Q6ZV73 1430 aa21.36■■□□□ 1.01
NLE1-205ENST00000588642 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
NLE1-205ENST00000588642 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
NLE1-205ENST00000588642 GPATCH8Q9UKJ3 1502 aaKnown RBP21.34■■□□□ 1.01
NLE1-205ENST00000588642 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
NLE1-205ENST00000588642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.33■■□□□ 1
NLE1-205ENST00000588642 MIA2Q96PC5 1412 aa21.32■■□□□ 1
NLE1-205ENST00000588642 ITGAEP38570 1179 aa21.28■■□□□ 1
NLE1-205ENST00000588642 FAM69CQ0P6D2 419 aa21.28■■□□□ 1
NLE1-205ENST00000588642 ZNF644Q9H582 1327 aaPredicted RBP21.28■■□□□ 1
NLE1-205ENST00000588642 TTC37Q6PGP7 1564 aa21.27■■□□□ 1
NLE1-205ENST00000588642 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
NLE1-205ENST00000588642 PLCH2O75038 1416 aa21.27■■□□□ 1
NLE1-205ENST00000588642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.25■□□□□ 0.99
NLE1-205ENST00000588642 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
NLE1-205ENST00000588642 ABCA9Q8IUA7 1624 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms