RNA–Protein interactions for RNA: ENST00000587877.1

LINC01478-201, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 1 (best) BASIC

Gene LINC01478, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-201ENST00000587877 CLIP1P30622 1438 aa8.65□□□□□ -1.02
LINC01478-201ENST00000587877 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
LINC01478-201ENST00000587877 SYNJ1O43426 1573 aa8.63□□□□□ -1.03
LINC01478-201ENST00000587877 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
LINC01478-201ENST00000587877 ABCB7O75027 752 aa8.61□□□□□ -1.03
LINC01478-201ENST00000587877 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
LINC01478-201ENST00000587877 ATAD2BQ9ULI0 1458 aa8.59□□□□□ -1.03
LINC01478-201ENST00000587877 TTBK1Q5TCY1 1321 aaPredicted RBP8.59□□□□□ -1.03
LINC01478-201ENST00000587877 ERICH3Q5RHP9 1530 aa8.58□□□□□ -1.04
LINC01478-201ENST00000587877 TOP2BQ02880 1626 aa8.57□□□□□ -1.04
LINC01478-201ENST00000587877 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
LINC01478-201ENST00000587877 RAPGEF2Q9Y4G8 1499 aa8.57□□□□□ -1.04
LINC01478-201ENST00000587877 BIVM-ERCC5R4GMW8 1640 aa8.55□□□□□ -1.04
LINC01478-201ENST00000587877 CHRDL2Q6WN34 429 aa8.55□□□□□ -1.04
LINC01478-201ENST00000587877 MIER1Q8N108 512 aa8.54□□□□□ -1.04
LINC01478-201ENST00000587877 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
LINC01478-201ENST00000587877 CUX2O14529 1486 aa8.51□□□□□ -1.05
LINC01478-201ENST00000587877 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
LINC01478-201ENST00000587877 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
LINC01478-201ENST00000587877 ARAP1Q96P48 1450 aa8.49□□□□□ -1.05
LINC01478-201ENST00000587877 PABPN1Q86U42 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC01478-201ENST00000587877 YTHDC1Q96MU7 727 aaKnown RBP8.49□□□□□ -1.05
LINC01478-201ENST00000587877 LHX8Q68G74 356 aa8.48□□□□□ -1.05
LINC01478-201ENST00000587877 HMGXB3Q12766 1538 aa8.47□□□□□ -1.05
LINC01478-201ENST00000587877 KIF27Q86VH2 1401 aa8.46□□□□□ -1.06
LINC01478-201ENST00000587877 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
LINC01478-201ENST00000587877 MAP3K1Q13233 1512 aa8.45□□□□□ -1.06
LINC01478-201ENST00000587877 NCAPD3P42695 1498 aa8.44□□□□□ -1.06
LINC01478-201ENST00000587877 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
LINC01478-201ENST00000587877 POLA2Q14181 598 aa8.42□□□□□ -1.06
LINC01478-201ENST00000587877 CUX1P39880 1505 aa8.41□□□□□ -1.06
LINC01478-201ENST00000587877 CFTRP13569 1480 aa8.4□□□□□ -1.07
LINC01478-201ENST00000587877 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.07
LINC01478-201ENST00000587877 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
LINC01478-201ENST00000587877 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
LINC01478-201ENST00000587877 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
LINC01478-201ENST00000587877 TIAM1Q13009 1591 aa8.36□□□□□ -1.07
LINC01478-201ENST00000587877 TIMELESSQ9UNS1 1208 aa8.36□□□□□ -1.07
LINC01478-201ENST00000587877 RANGAP1P46060 587 aaPredicted RBP8.34□□□□□ -1.07
LINC01478-201ENST00000587877 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
LINC01478-201ENST00000587877 RAB3GAP2Q9H2M9 1393 aa8.34□□□□□ -1.08
LINC01478-201ENST00000587877 FHAD1B1AJZ9 1412 aa8.33□□□□□ -1.08
LINC01478-201ENST00000587877 SETD5Q9C0A6 1442 aa8.33□□□□□ -1.08
LINC01478-201ENST00000587877 PRDM2Q13029 1718 aa8.32□□□□□ -1.08
LINC01478-201ENST00000587877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC01478-201ENST00000587877 LRRC9Q6ZRR7 1453 aa8.32□□□□□ -1.08
LINC01478-201ENST00000587877 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
LINC01478-201ENST00000587877 IGF1RP08069 1367 aa8.31□□□□□ -1.08
LINC01478-201ENST00000587877 CFAP43Q8NDM7 1665 aa8.3□□□□□ -1.08
LINC01478-201ENST00000587877 CARMIL1Q5VZK9 1371 aa8.28□□□□□ -1.08
LINC01478-201ENST00000587877 HAX1O00165 279 aa8.28□□□□□ -1.08
LINC01478-201ENST00000587877 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
LINC01478-201ENST00000587877 AQRO60306 1485 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC01478-201ENST00000587877 EFCAB5A4FU69 1503 aa8.27□□□□□ -1.09
LINC01478-201ENST00000587877 FYCO1Q9BQS8 1478 aa8.26□□□□□ -1.09
LINC01478-201ENST00000587877 CCER2I3L3R5 266 aa8.26□□□□□ -1.09
LINC01478-201ENST00000587877 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
LINC01478-201ENST00000587877 PHLDB1Q86UU1 1377 aa8.26□□□□□ -1.09
LINC01478-201ENST00000587877 CADPSQ9ULU8 1353 aa8.26□□□□□ -1.09
LINC01478-201ENST00000587877 FGD5Q6ZNL6 1462 aa8.25□□□□□ -1.09
LINC01478-201ENST00000587877 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
LINC01478-201ENST00000587877 CASKIN1Q8WXD9 1431 aa8.24□□□□□ -1.09
LINC01478-201ENST00000587877 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
LINC01478-201ENST00000587877 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
LINC01478-201ENST00000587877 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
LINC01478-201ENST00000587877 ITGAEP38570 1179 aa8.22□□□□□ -1.09
LINC01478-201ENST00000587877 CC2D2AQ9P2K1 1620 aa8.21□□□□□ -1.1
LINC01478-201ENST00000587877 ANP32EQ9BTT0 268 aa8.21□□□□□ -1.1
LINC01478-201ENST00000587877 CUL7Q14999 1698 aa8.2□□□□□ -1.1
LINC01478-201ENST00000587877 ABCA10Q8WWZ4 1543 aa8.2□□□□□ -1.1
LINC01478-201ENST00000587877 FMN1Q68DA7 1419 aa8.2□□□□□ -1.1
LINC01478-201ENST00000587877 ANP32CO43423 234 aa8.19□□□□□ -1.1
LINC01478-201ENST00000587877 NEFLP07196 543 aa8.19□□□□□ -1.1
LINC01478-201ENST00000587877 FAM50AQ14320 339 aaKnown RBP8.19□□□□□ -1.1
LINC01478-201ENST00000587877 DDX10Q13206 875 aaKnown RBP8.18□□□□□ -1.1
LINC01478-201ENST00000587877 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
LINC01478-201ENST00000587877 HFM1A2PYH4 1435 aa8.18□□□□□ -1.1
LINC01478-201ENST00000587877 FGD6Q6ZV73 1430 aa8.18□□□□□ -1.1
LINC01478-201ENST00000587877 UACAQ9BZF9 1416 aa8.18□□□□□ -1.1
LINC01478-201ENST00000587877 MKRN4PQ13434 485 aaPredicted RBP8.18□□□□□ -1.1
LINC01478-201ENST00000587877 THOC2Q8NI27 1593 aaKnown RBP8.17□□□□□ -1.1
LINC01478-201ENST00000587877 OSCARQ8IYS5 282 aa8.17□□□□□ -1.1
LINC01478-201ENST00000587877 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
LINC01478-201ENST00000587877 SIN3AQ96ST3 1273 aa8.17□□□□□ -1.1
LINC01478-201ENST00000587877 TONSLQ96HA7 1378 aa8.16□□□□□ -1.1
LINC01478-201ENST00000587877 FKBP8Q14318 412 aa8.16□□□□□ -1.1
LINC01478-201ENST00000587877 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
LINC01478-201ENST00000587877 CCDC18Q5T9S5 1454 aa8.16□□□□□ -1.1
LINC01478-201ENST00000587877 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
LINC01478-201ENST00000587877 SNAPC4Q5SXM2 1469 aa8.15□□□□□ -1.1
LINC01478-201ENST00000587877 CTTNBP2Q8WZ74 1663 aa8.15□□□□□ -1.1
LINC01478-201ENST00000587877 PTPN23Q9H3S7 1636 aa8.14□□□□□ -1.11
LINC01478-201ENST00000587877 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
LINC01478-201ENST00000587877 SAMD9Q5K651 1589 aa8.13□□□□□ -1.11
LINC01478-201ENST00000587877 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
LINC01478-201ENST00000587877 MYOM3Q5VTT5 1437 aa8.13□□□□□ -1.11
LINC01478-201ENST00000587877 AKNAQ7Z591 1439 aa8.13□□□□□ -1.11
LINC01478-201ENST00000587877 ERICH6BQ5W0A0 696 aa8.12□□□□□ -1.11
LINC01478-201ENST00000587877 EHBP1L1Q8N3D4 1523 aa8.12□□□□□ -1.11
LINC01478-201ENST00000587877 MTUS2Q5JR59 1369 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms