RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
MSI2-218ENST00000583821 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
MSI2-218ENST00000583821 SYNJ2O15056 1496 aa14.64□□□□□ -0.07
MSI2-218ENST00000583821 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
MSI2-218ENST00000583821 BIVM-ERCC5R4GMW8 1640 aa14.64□□□□□ -0.07
MSI2-218ENST00000583821 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
MSI2-218ENST00000583821 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
MSI2-218ENST00000583821 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
MSI2-218ENST00000583821 ADAMTS12P58397 1594 aa14.59□□□□□ -0.07
MSI2-218ENST00000583821 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
MSI2-218ENST00000583821 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
MSI2-218ENST00000583821 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
MSI2-218ENST00000583821 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
MSI2-218ENST00000583821 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
MSI2-218ENST00000583821 SHROOM2Q13796 1616 aa14.47□□□□□ -0.09
MSI2-218ENST00000583821 NUP160Q12769 1436 aa14.45□□□□□ -0.1
MSI2-218ENST00000583821 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
MSI2-218ENST00000583821 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
MSI2-218ENST00000583821 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
MSI2-218ENST00000583821 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
MSI2-218ENST00000583821 KIF13AQ9H1H9 1805 aa14.34□□□□□ -0.11
MSI2-218ENST00000583821 PRG4Q92954 1404 aaPredicted RBP14.32□□□□□ -0.12
MSI2-218ENST00000583821 CUL7Q14999 1698 aa14.3□□□□□ -0.12
MSI2-218ENST00000583821 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
MSI2-218ENST00000583821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSI2-218ENST00000583821 ADCY10Q96PN6 1610 aa14.25□□□□□ -0.13
MSI2-218ENST00000583821 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
MSI2-218ENST00000583821 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
MSI2-218ENST00000583821 IGF1RP08069 1367 aa14.22□□□□□ -0.13
MSI2-218ENST00000583821 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
MSI2-218ENST00000583821 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
MSI2-218ENST00000583821 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
MSI2-218ENST00000583821 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
MSI2-218ENST00000583821 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
MSI2-218ENST00000583821 IQGAP2Q13576 1575 aa14.13□□□□□ -0.15
MSI2-218ENST00000583821 ABCC10Q5T3U5 1492 aa14.12□□□□□ -0.15
MSI2-218ENST00000583821 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
MSI2-218ENST00000583821 ZBTB22O15209 634 aa14.11□□□□□ -0.15
MSI2-218ENST00000583821 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
MSI2-218ENST00000583821 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
MSI2-218ENST00000583821 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
MSI2-218ENST00000583821 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
MSI2-218ENST00000583821 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
MSI2-218ENST00000583821 PTPRGP23470 1445 aa14.05□□□□□ -0.16
MSI2-218ENST00000583821 DISP1Q96F81 1524 aa14.05□□□□□ -0.16
MSI2-218ENST00000583821 KDM6BO15054 1643 aa14.04□□□□□ -0.16
MSI2-218ENST00000583821 TNIKQ9UKE5 1360 aa14.03□□□□□ -0.16
MSI2-218ENST00000583821 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
MSI2-218ENST00000583821 PPRC1Q5VV67 1664 aaKnown RBP14.03□□□□□ -0.16
MSI2-218ENST00000583821 KIAA0556O60303 1618 aa14.02□□□□□ -0.16
MSI2-218ENST00000583821 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
MSI2-218ENST00000583821 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.16
MSI2-218ENST00000583821 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
MSI2-218ENST00000583821 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
MSI2-218ENST00000583821 ZCCHC11Q5TAX3 1644 aaKnown RBP14□□□□□ -0.17
MSI2-218ENST00000583821 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
MSI2-218ENST00000583821 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
MSI2-218ENST00000583821 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
MSI2-218ENST00000583821 UACAQ9BZF9 1416 aa13.96□□□□□ -0.18
MSI2-218ENST00000583821 GLI2P10070 1586 aa13.96□□□□□ -0.18
MSI2-218ENST00000583821 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
MSI2-218ENST00000583821 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
MSI2-218ENST00000583821 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
MSI2-218ENST00000583821 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
MSI2-218ENST00000583821 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
MSI2-218ENST00000583821 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
MSI2-218ENST00000583821 ABCA8O94911 1581 aa13.88□□□□□ -0.19
MSI2-218ENST00000583821 PRXQ9BXM0 1461 aa13.87□□□□□ -0.19
MSI2-218ENST00000583821 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
MSI2-218ENST00000583821 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
MSI2-218ENST00000583821 COL17A1Q9UMD9 1497 aaPredicted RBP13.84□□□□□ -0.19
MSI2-218ENST00000583821 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
MSI2-218ENST00000583821 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
MSI2-218ENST00000583821 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
MSI2-218ENST00000583821 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
MSI2-218ENST00000583821 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
MSI2-218ENST00000583821 SAMD9Q5K651 1589 aa13.79□□□□□ -0.2
MSI2-218ENST00000583821 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
MSI2-218ENST00000583821 ADGRL1O94910 1474 aa13.78□□□□□ -0.2
MSI2-218ENST00000583821 ARID3CA6NKF2 412 aa13.75□□□□□ -0.21
MSI2-218ENST00000583821 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
MSI2-218ENST00000583821 RAPGEF6Q8TEU7 1601 aa13.74□□□□□ -0.21
MSI2-218ENST00000583821 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
MSI2-218ENST00000583821 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
MSI2-218ENST00000583821 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
MSI2-218ENST00000583821 KIF21BO75037 1637 aa13.72□□□□□ -0.21
MSI2-218ENST00000583821 ATP10BO94823 1461 aa13.71□□□□□ -0.21
MSI2-218ENST00000583821 ABCA9Q8IUA7 1624 aa13.7□□□□□ -0.22
MSI2-218ENST00000583821 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
MSI2-218ENST00000583821 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
MSI2-218ENST00000583821 CAPN15O75808 1086 aa13.66□□□□□ -0.22
MSI2-218ENST00000583821 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
MSI2-218ENST00000583821 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
MSI2-218ENST00000583821 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
MSI2-218ENST00000583821 EEA1Q15075 1411 aa13.64□□□□□ -0.23
MSI2-218ENST00000583821 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
MSI2-218ENST00000583821 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
MSI2-218ENST00000583821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
MSI2-218ENST00000583821 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
MSI2-218ENST00000583821 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms