RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
MSI2-218ENST00000583821 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
MSI2-218ENST00000583821 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
MSI2-218ENST00000583821 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
MSI2-218ENST00000583821 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
MSI2-218ENST00000583821 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
MSI2-218ENST00000583821 ABCC9O60706 1549 aa18.39■□□□□ 0.53
MSI2-218ENST00000583821 FOXD1Q16676 465 aa17.95■□□□□ 0.46
MSI2-218ENST00000583821 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
MSI2-218ENST00000583821 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
MSI2-218ENST00000583821 NACADO15069 1562 aa17.33■□□□□ 0.37
MSI2-218ENST00000583821 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
MSI2-218ENST00000583821 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
MSI2-218ENST00000583821 ADRA2BP18089 450 aa17.23■□□□□ 0.35
MSI2-218ENST00000583821 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
MSI2-218ENST00000583821 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
MSI2-218ENST00000583821 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
MSI2-218ENST00000583821 MYO15BQ96JP2 1530 aa17.05■□□□□ 0.32
MSI2-218ENST00000583821 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
MSI2-218ENST00000583821 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
MSI2-218ENST00000583821 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
MSI2-218ENST00000583821 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
MSI2-218ENST00000583821 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
MSI2-218ENST00000583821 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
MSI2-218ENST00000583821 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
MSI2-218ENST00000583821 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
MSI2-218ENST00000583821 CECR2Q9BXF3 1484 aa16.53■□□□□ 0.24
MSI2-218ENST00000583821 MSH5O43196 834 aa16.41■□□□□ 0.22
MSI2-218ENST00000583821 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
MSI2-218ENST00000583821 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
MSI2-218ENST00000583821 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
MSI2-218ENST00000583821 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
MSI2-218ENST00000583821 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
MSI2-218ENST00000583821 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
MSI2-218ENST00000583821 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
MSI2-218ENST00000583821 NESP48681 1621 aa15.82■□□□□ 0.12
MSI2-218ENST00000583821 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
MSI2-218ENST00000583821 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
MSI2-218ENST00000583821 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
MSI2-218ENST00000583821 CUX2O14529 1486 aa15.78■□□□□ 0.12
MSI2-218ENST00000583821 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
MSI2-218ENST00000583821 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
MSI2-218ENST00000583821 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
MSI2-218ENST00000583821 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
MSI2-218ENST00000583821 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
MSI2-218ENST00000583821 LAMC3Q9Y6N6 1575 aa15.66■□□□□ 0.1
MSI2-218ENST00000583821 WIZO95785 1651 aa15.65■□□□□ 0.1
MSI2-218ENST00000583821 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
MSI2-218ENST00000583821 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
MSI2-218ENST00000583821 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
MSI2-218ENST00000583821 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
MSI2-218ENST00000583821 WDR62O43379 1518 aa15.42■□□□□ 0.06
MSI2-218ENST00000583821 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
MSI2-218ENST00000583821 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
MSI2-218ENST00000583821 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
MSI2-218ENST00000583821 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
MSI2-218ENST00000583821 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
MSI2-218ENST00000583821 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
MSI2-218ENST00000583821 CFTRP13569 1480 aa15.32■□□□□ 0.04
MSI2-218ENST00000583821 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
MSI2-218ENST00000583821 KCNA4P22459 653 aa15.28■□□□□ 0.04
MSI2-218ENST00000583821 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
MSI2-218ENST00000583821 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
MSI2-218ENST00000583821 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
MSI2-218ENST00000583821 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
MSI2-218ENST00000583821 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
MSI2-218ENST00000583821 TOPBP1Q92547 1522 aa15.07■□□□□ 0
MSI2-218ENST00000583821 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
MSI2-218ENST00000583821 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
MSI2-218ENST00000583821 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
MSI2-218ENST00000583821 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
MSI2-218ENST00000583821 IFT140Q96RY7 1462 aa15.03■□□□□ -0
MSI2-218ENST00000583821 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
MSI2-218ENST00000583821 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
MSI2-218ENST00000583821 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
MSI2-218ENST00000583821 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
MSI2-218ENST00000583821 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
MSI2-218ENST00000583821 CHD1O14646 1710 aa14.97□□□□□ -0.01
MSI2-218ENST00000583821 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
MSI2-218ENST00000583821 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
MSI2-218ENST00000583821 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
MSI2-218ENST00000583821 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
MSI2-218ENST00000583821 AQRO60306 1485 aaKnown RBP eCLIP14.9□□□□□ -0.02
MSI2-218ENST00000583821 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
MSI2-218ENST00000583821 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
MSI2-218ENST00000583821 CUX1P39880 1505 aa14.85□□□□□ -0.03
MSI2-218ENST00000583821 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.03
MSI2-218ENST00000583821 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
MSI2-218ENST00000583821 SOGA1O94964 1423 aa14.79□□□□□ -0.04
MSI2-218ENST00000583821 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
MSI2-218ENST00000583821 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
MSI2-218ENST00000583821 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.04
MSI2-218ENST00000583821 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
MSI2-218ENST00000583821 FBLN2P98095 1184 aa14.75□□□□□ -0.05
MSI2-218ENST00000583821 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
MSI2-218ENST00000583821 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
MSI2-218ENST00000583821 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
MSI2-218ENST00000583821 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
MSI2-218ENST00000583821 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
MSI2-218ENST00000583821 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms