RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 DIP2BQ9P265 1576 aa25.52■■□□□ 1.68
CSNK1D-219ENST00000581660 ILDR1Q86SU0 546 aaPredicted RBP25.48■■□□□ 1.67
CSNK1D-219ENST00000581660 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
CSNK1D-219ENST00000581660 KDM6BO15054 1643 aa25.45■■□□□ 1.67
CSNK1D-219ENST00000581660 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
CSNK1D-219ENST00000581660 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
CSNK1D-219ENST00000581660 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
CSNK1D-219ENST00000581660 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
CSNK1D-219ENST00000581660 ADCY10Q96PN6 1610 aa25.41■■□□□ 1.66
CSNK1D-219ENST00000581660 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
CSNK1D-219ENST00000581660 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
CSNK1D-219ENST00000581660 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
CSNK1D-219ENST00000581660 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
CSNK1D-219ENST00000581660 GLI2P10070 1586 aa25.11■■□□□ 1.61
CSNK1D-219ENST00000581660 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
CSNK1D-219ENST00000581660 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
CSNK1D-219ENST00000581660 PTPRGP23470 1445 aa25.06■■□□□ 1.6
CSNK1D-219ENST00000581660 PLB1Q6P1J6 1458 aa25.05■■□□□ 1.6
CSNK1D-219ENST00000581660 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
CSNK1D-219ENST00000581660 CUL7Q14999 1698 aa25.01■■□□□ 1.59
CSNK1D-219ENST00000581660 IGF1RP08069 1367 aa25■■□□□ 1.59
CSNK1D-219ENST00000581660 COL17A1Q9UMD9 1497 aaPredicted RBP24.99■■□□□ 1.59
CSNK1D-219ENST00000581660 UHRF1BP1LA0JNW5 1464 aa24.97■■□□□ 1.59
CSNK1D-219ENST00000581660 TNIKQ9UKE5 1360 aa24.97■■□□□ 1.59
CSNK1D-219ENST00000581660 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
CSNK1D-219ENST00000581660 CARMIL2Q6F5E8 1435 aa24.93■■□□□ 1.58
CSNK1D-219ENST00000581660 MAP3K4Q9Y6R4 1608 aa24.92■■□□□ 1.58
CSNK1D-219ENST00000581660 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
CSNK1D-219ENST00000581660 EPRSP07814 1512 aaKnown RBP24.9■■□□□ 1.58
CSNK1D-219ENST00000581660 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.58
CSNK1D-219ENST00000581660 UACAQ9BZF9 1416 aa24.86■■□□□ 1.57
CSNK1D-219ENST00000581660 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
CSNK1D-219ENST00000581660 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.56
CSNK1D-219ENST00000581660 IQGAP2Q13576 1575 aa24.82■■□□□ 1.56
CSNK1D-219ENST00000581660 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
CSNK1D-219ENST00000581660 DISP1Q96F81 1524 aa24.78■■□□□ 1.56
CSNK1D-219ENST00000581660 FBXO41Q8TF61 875 aa24.75■■□□□ 1.55
CSNK1D-219ENST00000581660 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
CSNK1D-219ENST00000581660 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
CSNK1D-219ENST00000581660 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
CSNK1D-219ENST00000581660 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
CSNK1D-219ENST00000581660 KIAA0556O60303 1618 aa24.61■■□□□ 1.53
CSNK1D-219ENST00000581660 CFAP43Q8NDM7 1665 aa24.6■■□□□ 1.53
CSNK1D-219ENST00000581660 CD109Q6YHK3 1445 aa24.58■■□□□ 1.53
CSNK1D-219ENST00000581660 KIF21BO75037 1637 aa24.57■■□□□ 1.52
CSNK1D-219ENST00000581660 RAPGEF2Q9Y4G8 1499 aa24.49■■□□□ 1.51
CSNK1D-219ENST00000581660 ARAP3Q8WWN8 1544 aa24.49■■□□□ 1.51
CSNK1D-219ENST00000581660 ADAMTSL3P82987 1691 aa24.47■■□□□ 1.51
CSNK1D-219ENST00000581660 PTPRMP28827 1452 aa24.47■■□□□ 1.51
CSNK1D-219ENST00000581660 ABCA8O94911 1581 aa24.46■■□□□ 1.51
CSNK1D-219ENST00000581660 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
CSNK1D-219ENST00000581660 PCF11O94913 1555 aaKnown RBP24.38■■□□□ 1.49
CSNK1D-219ENST00000581660 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
CSNK1D-219ENST00000581660 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
CSNK1D-219ENST00000581660 LMTK3Q96Q04 1460 aa24.35■■□□□ 1.49
CSNK1D-219ENST00000581660 CTTNBP2Q8WZ74 1663 aa24.32■■□□□ 1.48
CSNK1D-219ENST00000581660 BCORL1Q5H9F3 1711 aa24.32■■□□□ 1.48
CSNK1D-219ENST00000581660 ABCA9Q8IUA7 1624 aa24.28■■□□□ 1.48
CSNK1D-219ENST00000581660 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
CSNK1D-219ENST00000581660 NEO1Q92859 1461 aa24.25■■□□□ 1.47
CSNK1D-219ENST00000581660 FRMPD1Q5SYB0 1578 aa24.23■■□□□ 1.47
CSNK1D-219ENST00000581660 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
CSNK1D-219ENST00000581660 ATP10BO94823 1461 aa24.21■■□□□ 1.47
CSNK1D-219ENST00000581660 ARHGEF40Q8TER5 1519 aa24.16■■□□□ 1.46
CSNK1D-219ENST00000581660 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
CSNK1D-219ENST00000581660 ARID4BQ4LE39 1312 aaPredicted RBP24.14■■□□□ 1.46
CSNK1D-219ENST00000581660 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
CSNK1D-219ENST00000581660 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
CSNK1D-219ENST00000581660 ARID3CA6NKF2 412 aa24.09■■□□□ 1.45
CSNK1D-219ENST00000581660 HSPA2P54652 639 aa24.09■■□□□ 1.45
CSNK1D-219ENST00000581660 FAM9AQ8IZU1 332 aaPredicted RBP24.06■■□□□ 1.44
CSNK1D-219ENST00000581660 RICTORQ6R327 1708 aa24.05■■□□□ 1.44
CSNK1D-219ENST00000581660 SOCS7O14512 581 aa24.05■■□□□ 1.44
CSNK1D-219ENST00000581660 FHOD3Q2V2M9 1422 aa24.04■■□□□ 1.44
CSNK1D-219ENST00000581660 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
CSNK1D-219ENST00000581660 POGZQ7Z3K3 1410 aa24.02■■□□□ 1.44
CSNK1D-219ENST00000581660 FANCAO15360 1455 aa24.01■■□□□ 1.43
CSNK1D-219ENST00000581660 ILDR2Q71H61 639 aa24.01■■□□□ 1.43
CSNK1D-219ENST00000581660 RAPGEF6Q8TEU7 1601 aa24.01■■□□□ 1.43
CSNK1D-219ENST00000581660 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
CSNK1D-219ENST00000581660 AKNAQ7Z591 1439 aa24■■□□□ 1.43
CSNK1D-219ENST00000581660 DISP3Q9P2K9 1392 aa23.99■■□□□ 1.43
CSNK1D-219ENST00000581660 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
CSNK1D-219ENST00000581660 SIGLEC1Q9BZZ2 1709 aa23.96■■□□□ 1.43
CSNK1D-219ENST00000581660 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
CSNK1D-219ENST00000581660 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.43
CSNK1D-219ENST00000581660 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
CSNK1D-219ENST00000581660 NUP153P49790 1475 aaKnown RBP23.94■■□□□ 1.42
CSNK1D-219ENST00000581660 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
CSNK1D-219ENST00000581660 ZFYVE16Q7Z3T8 1539 aa23.94■■□□□ 1.42
CSNK1D-219ENST00000581660 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
CSNK1D-219ENST00000581660 YEATS2Q9ULM3 1422 aa23.91■■□□□ 1.42
CSNK1D-219ENST00000581660 FER1L4A9Z1Z3 1794 aa23.91■■□□□ 1.42
CSNK1D-219ENST00000581660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
CSNK1D-219ENST00000581660 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-219ENST00000581660 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
CSNK1D-219ENST00000581660 PREX1Q8TCU6 1659 aa23.87■■□□□ 1.41
CSNK1D-219ENST00000581660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.85■■□□□ 1.41
CSNK1D-219ENST00000581660 ARHGEF12Q9NZN5 1544 aa23.85■■□□□ 1.41
CSNK1D-219ENST00000581660 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms