RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 JPH4Q96JJ6 628 aa30.24■■■□□ 2.43
TOP2A-205ENST00000581055 KIAA0586Q9BVV6 1533 aa30.23■■■□□ 2.43
TOP2A-205ENST00000581055 CYB5RLQ6IPT4 315 aa30.23■■■□□ 2.43
TOP2A-205ENST00000581055 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
TOP2A-205ENST00000581055 PRXQ9BXM0 1461 aa30.18■■■□□ 2.42
TOP2A-205ENST00000581055 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
TOP2A-205ENST00000581055 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
TOP2A-205ENST00000581055 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
TOP2A-205ENST00000581055 ERCC6L2Q5T890 1561 aa30.04■■■□□ 2.4
TOP2A-205ENST00000581055 IQGAP2Q13576 1575 aa30.01■■■□□ 2.39
TOP2A-205ENST00000581055 CARMIL2Q6F5E8 1435 aa29.96■■■□□ 2.39
TOP2A-205ENST00000581055 UGGT2Q9NYU1 1516 aa29.87■■■□□ 2.37
TOP2A-205ENST00000581055 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
TOP2A-205ENST00000581055 KIF21BO75037 1637 aa29.83■■■□□ 2.37
TOP2A-205ENST00000581055 PTPRGP23470 1445 aa29.82■■■□□ 2.36
TOP2A-205ENST00000581055 CTTNBP2Q8WZ74 1663 aa29.81■■■□□ 2.36
TOP2A-205ENST00000581055 DISP1Q96F81 1524 aa29.81■■■□□ 2.36
TOP2A-205ENST00000581055 GOLGA3Q08378 1498 aa29.79■■■□□ 2.36
TOP2A-205ENST00000581055 TTBK1Q5TCY1 1321 aaPredicted RBP29.75■■■□□ 2.35
TOP2A-205ENST00000581055 UBTFP17480 764 aaKnown RBP29.73■■■□□ 2.35
TOP2A-205ENST00000581055 EHMT2Q96KQ7 1210 aa29.7■■■□□ 2.35
TOP2A-205ENST00000581055 KIAA0556O60303 1618 aa29.7■■■□□ 2.34
TOP2A-205ENST00000581055 NPM1P06748 294 aaKnown RBP eCLIP29.69■■■□□ 2.34
TOP2A-205ENST00000581055 TRHP20396 242 aaPredicted RBP29.62■■■□□ 2.33
TOP2A-205ENST00000581055 RANGAP1P46060 587 aaPredicted RBP29.61■■■□□ 2.33
TOP2A-205ENST00000581055 UACAQ9BZF9 1416 aa29.6■■■□□ 2.33
TOP2A-205ENST00000581055 P3H3Q8IVL6 736 aa29.58■■■□□ 2.33
TOP2A-205ENST00000581055 ADCY10Q96PN6 1610 aa29.56■■■□□ 2.32
TOP2A-205ENST00000581055 UHRF1BP1LA0JNW5 1464 aa29.55■■■□□ 2.32
TOP2A-205ENST00000581055 SAMD9Q5K651 1589 aa29.52■■■□□ 2.32
TOP2A-205ENST00000581055 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
TOP2A-205ENST00000581055 EFCAB5A4FU69 1503 aa29.47■■■□□ 2.31
TOP2A-205ENST00000581055 PLB1Q6P1J6 1458 aa29.45■■■□□ 2.31
TOP2A-205ENST00000581055 MAPKBP1O60336 1514 aa29.43■■■□□ 2.3
TOP2A-205ENST00000581055 FHOD3Q2V2M9 1422 aa29.41■■■□□ 2.3
TOP2A-205ENST00000581055 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.3
TOP2A-205ENST00000581055 ABCA8O94911 1581 aa29.39■■■□□ 2.29
TOP2A-205ENST00000581055 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
TOP2A-205ENST00000581055 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
TOP2A-205ENST00000581055 ASXL2Q76L83 1435 aa29.31■■■□□ 2.28
TOP2A-205ENST00000581055 FAM69CQ0P6D2 419 aa29.31■■■□□ 2.28
TOP2A-205ENST00000581055 FMN1Q68DA7 1419 aa29.26■■■□□ 2.27
TOP2A-205ENST00000581055 ZCCHC11Q5TAX3 1644 aaKnown RBP29.23■■■□□ 2.27
TOP2A-205ENST00000581055 RAPGEF6Q8TEU7 1601 aa29.23■■■□□ 2.27
TOP2A-205ENST00000581055 CLIP1P30622 1438 aa29.22■■■□□ 2.27
TOP2A-205ENST00000581055 ARID3CA6NKF2 412 aa29.22■■■□□ 2.27
TOP2A-205ENST00000581055 ATP10BO94823 1461 aa29.2■■■□□ 2.26
TOP2A-205ENST00000581055 DIP2BQ9P265 1576 aa29.18■■■□□ 2.26
TOP2A-205ENST00000581055 LOC105371045A0A1W2PR82 267 aa29.18■■■□□ 2.26
TOP2A-205ENST00000581055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.18■■■□□ 2.26
TOP2A-205ENST00000581055 HNRNPUL2Q1KMD3 747 aaKnown RBP29.18■■■□□ 2.26
TOP2A-205ENST00000581055 NUP153P49790 1475 aaKnown RBP29.17■■■□□ 2.26
TOP2A-205ENST00000581055 WDR7Q9Y4E6 1490 aa29.17■■■□□ 2.26
TOP2A-205ENST00000581055 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
TOP2A-205ENST00000581055 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
TOP2A-205ENST00000581055 KIF13AQ9H1H9 1805 aa29.09■■■□□ 2.25
TOP2A-205ENST00000581055 KCNH8Q96L42 1107 aa29.09■■■□□ 2.25
TOP2A-205ENST00000581055 CEP162Q5TB80 1403 aa29.09■■■□□ 2.25
TOP2A-205ENST00000581055 GLI2P10070 1586 aa29.09■■■□□ 2.25
TOP2A-205ENST00000581055 PLEKHD1A6NEE1 506 aa29.05■■■□□ 2.24
TOP2A-205ENST00000581055 HECW1Q76N89 1606 aa29.02■■■□□ 2.24
TOP2A-205ENST00000581055 CASKIN1Q8WXD9 1431 aa29.01■■■□□ 2.23
TOP2A-205ENST00000581055 CDK11AQ9UQ88 783 aaPredicted RBP28.99■■■□□ 2.23
TOP2A-205ENST00000581055 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
TOP2A-205ENST00000581055 CD109Q6YHK3 1445 aa28.93■■■□□ 2.22
TOP2A-205ENST00000581055 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
TOP2A-205ENST00000581055 PCF11O94913 1555 aaKnown RBP28.89■■■□□ 2.22
TOP2A-205ENST00000581055 MAP3K4Q9Y6R4 1608 aa28.89■■■□□ 2.22
TOP2A-205ENST00000581055 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.22
TOP2A-205ENST00000581055 TEX14Q8IWB6 1497 aa28.89■■■□□ 2.22
TOP2A-205ENST00000581055 MAGI3Q5TCQ9 1506 aa28.84■■■□□ 2.21
TOP2A-205ENST00000581055 CFAP43Q8NDM7 1665 aa28.82■■■□□ 2.2
TOP2A-205ENST00000581055 TSPOAP1O95153 1857 aa28.82■■■□□ 2.2
TOP2A-205ENST00000581055 ABCA9Q8IUA7 1624 aa28.8■■■□□ 2.2
TOP2A-205ENST00000581055 TROQ12816 1431 aaPredicted RBP28.78■■■□□ 2.2
TOP2A-205ENST00000581055 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
TOP2A-205ENST00000581055 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
TOP2A-205ENST00000581055 PHLDB1Q86UU1 1377 aa28.72■■■□□ 2.19
TOP2A-205ENST00000581055 KDM6BO15054 1643 aa28.72■■■□□ 2.19
TOP2A-205ENST00000581055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.71■■■□□ 2.19
TOP2A-205ENST00000581055 LRRIQ1Q96JM4 1722 aa28.69■■■□□ 2.18
TOP2A-205ENST00000581055 KIF14Q15058 1648 aa28.66■■■□□ 2.18
TOP2A-205ENST00000581055 NEO1Q92859 1461 aa28.65■■■□□ 2.18
TOP2A-205ENST00000581055 MTUS2Q5JR59 1369 aa28.63■■■□□ 2.17
TOP2A-205ENST00000581055 TTC37Q6PGP7 1564 aa28.62■■■□□ 2.17
TOP2A-205ENST00000581055 PLCH2O75038 1416 aa28.62■■■□□ 2.17
TOP2A-205ENST00000581055 COL17A1Q9UMD9 1497 aaPredicted RBP28.61■■■□□ 2.17
TOP2A-205ENST00000581055 FANCAO15360 1455 aa28.59■■■□□ 2.17
TOP2A-205ENST00000581055 ARAP3Q8WWN8 1544 aa28.59■■■□□ 2.17
TOP2A-205ENST00000581055 EFCAB2Q5VUJ9 269 aa28.58■■■□□ 2.17
TOP2A-205ENST00000581055 AKNAQ7Z591 1439 aa28.54■■■□□ 2.16
TOP2A-205ENST00000581055 APLP2Q06481 763 aa28.53■■■□□ 2.16
TOP2A-205ENST00000581055 CFAP74Q9C0B2 1584 aa28.51■■■□□ 2.15
TOP2A-205ENST00000581055 EHBP1L1Q8N3D4 1523 aa28.49■■■□□ 2.15
TOP2A-205ENST00000581055 TIAM1Q13009 1591 aa28.48■■■□□ 2.15
TOP2A-205ENST00000581055 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
TOP2A-205ENST00000581055 RAPGEF3O95398 923 aa28.47■■■□□ 2.15
TOP2A-205ENST00000581055 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
TOP2A-205ENST00000581055 CCNB3Q8WWL7 1395 aa28.46■■■□□ 2.15
TOP2A-205ENST00000581055 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms