RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 NISCHQ9Y2I1 1504 aa43.64■■■■■ 4.58
TOP2A-205ENST00000581055 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
TOP2A-205ENST00000581055 ABCC9O60706 1549 aa37.86■■■■□ 3.65
TOP2A-205ENST00000581055 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
TOP2A-205ENST00000581055 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
TOP2A-205ENST00000581055 NACADO15069 1562 aa36.44■■■■□ 3.42
TOP2A-205ENST00000581055 ZCCHC6Q5VYS8 1495 aaKnown RBP36.36■■■■□ 3.41
TOP2A-205ENST00000581055 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
TOP2A-205ENST00000581055 DCAF1Q9Y4B6 1507 aa36.13■■■■□ 3.37
TOP2A-205ENST00000581055 PABPN1Q86U42 306 aaKnown RBP eCLIP35.44■■■■□ 3.26
TOP2A-205ENST00000581055 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
TOP2A-205ENST00000581055 SCRIBQ14160 1630 aa35.32■■■■□ 3.24
TOP2A-205ENST00000581055 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
TOP2A-205ENST00000581055 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
TOP2A-205ENST00000581055 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
TOP2A-205ENST00000581055 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
TOP2A-205ENST00000581055 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
TOP2A-205ENST00000581055 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
TOP2A-205ENST00000581055 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
TOP2A-205ENST00000581055 SMARCA4P51532 1647 aa33.79■■■■□ 3
TOP2A-205ENST00000581055 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
TOP2A-205ENST00000581055 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
TOP2A-205ENST00000581055 SMARCA2P51531 1590 aa33.63■■■□□ 2.97
TOP2A-205ENST00000581055 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
TOP2A-205ENST00000581055 PEG3Q9GZU2 1588 aa33.48■■■□□ 2.95
TOP2A-205ENST00000581055 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
TOP2A-205ENST00000581055 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
TOP2A-205ENST00000581055 RSF1Q96T23 1441 aaPredicted RBP33.31■■■□□ 2.92
TOP2A-205ENST00000581055 WIZO95785 1651 aa33.18■■■□□ 2.9
TOP2A-205ENST00000581055 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
TOP2A-205ENST00000581055 NESP48681 1621 aa32.74■■■□□ 2.83
TOP2A-205ENST00000581055 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
TOP2A-205ENST00000581055 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.82
TOP2A-205ENST00000581055 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
TOP2A-205ENST00000581055 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
TOP2A-205ENST00000581055 PDS5BQ9NTI5 1447 aa32.58■■■□□ 2.81
TOP2A-205ENST00000581055 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
TOP2A-205ENST00000581055 CFTRP13569 1480 aa32.49■■■□□ 2.79
TOP2A-205ENST00000581055 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
TOP2A-205ENST00000581055 CUX2O14529 1486 aa32.29■■■□□ 2.76
TOP2A-205ENST00000581055 KIF21AQ7Z4S6 1674 aa32.24■■■□□ 2.75
TOP2A-205ENST00000581055 CEP164Q9UPV0 1460 aa32.24■■■□□ 2.75
TOP2A-205ENST00000581055 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
TOP2A-205ENST00000581055 THOC2Q8NI27 1593 aaKnown RBP32.18■■■□□ 2.74
TOP2A-205ENST00000581055 WDR62O43379 1518 aa32.03■■■□□ 2.72
TOP2A-205ENST00000581055 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
TOP2A-205ENST00000581055 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
TOP2A-205ENST00000581055 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
TOP2A-205ENST00000581055 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
TOP2A-205ENST00000581055 DNMBPQ6XZF7 1577 aa31.71■■■□□ 2.67
TOP2A-205ENST00000581055 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
TOP2A-205ENST00000581055 CUX1P39880 1505 aa31.52■■■□□ 2.64
TOP2A-205ENST00000581055 POLA1P09884 1462 aaPredicted RBP31.49■■■□□ 2.63
TOP2A-205ENST00000581055 SOGA1O94964 1423 aa31.43■■■□□ 2.62
TOP2A-205ENST00000581055 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
TOP2A-205ENST00000581055 WRNQ14191 1432 aaPredicted RBP eCLIP31.42■■■□□ 2.62
TOP2A-205ENST00000581055 ZNF608Q9ULD9 1512 aaPredicted RBP31.38■■■□□ 2.61
TOP2A-205ENST00000581055 RAD54L2Q9Y4B4 1467 aa31.35■■■□□ 2.61
TOP2A-205ENST00000581055 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
TOP2A-205ENST00000581055 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
TOP2A-205ENST00000581055 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
TOP2A-205ENST00000581055 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.593e-8■■■□□ 18.6
TOP2A-205ENST00000581055 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
TOP2A-205ENST00000581055 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
TOP2A-205ENST00000581055 BIVM-ERCC5R4GMW8 1640 aa31.21■■■□□ 2.59
TOP2A-205ENST00000581055 EIF4G3O43432 1585 aaKnown RBP31.21■■■□□ 2.59
TOP2A-205ENST00000581055 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
TOP2A-205ENST00000581055 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
TOP2A-205ENST00000581055 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
TOP2A-205ENST00000581055 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
TOP2A-205ENST00000581055 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
TOP2A-205ENST00000581055 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.54
TOP2A-205ENST00000581055 FBLN2P98095 1184 aa30.94■■■□□ 2.54
TOP2A-205ENST00000581055 ABCA5Q8WWZ7 1642 aa30.94■■■□□ 2.54
TOP2A-205ENST00000581055 MAGI1Q96QZ7 1491 aaPredicted RBP30.94■■■□□ 2.54
TOP2A-205ENST00000581055 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
TOP2A-205ENST00000581055 SYNJ2O15056 1496 aa30.82■■■□□ 2.52
TOP2A-205ENST00000581055 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
TOP2A-205ENST00000581055 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
TOP2A-205ENST00000581055 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
TOP2A-205ENST00000581055 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
TOP2A-205ENST00000581055 CHD1O14646 1710 aa30.72■■■□□ 2.51
TOP2A-205ENST00000581055 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
TOP2A-205ENST00000581055 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
TOP2A-205ENST00000581055 IGF1RP08069 1367 aa30.65■■■□□ 2.5
TOP2A-205ENST00000581055 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
TOP2A-205ENST00000581055 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
TOP2A-205ENST00000581055 NUP160Q12769 1436 aa30.47■■■□□ 2.47
TOP2A-205ENST00000581055 CARMIL1Q5VZK9 1371 aa30.47■■■□□ 2.47
TOP2A-205ENST00000581055 CUL7Q14999 1698 aa30.46■■■□□ 2.47
TOP2A-205ENST00000581055 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
TOP2A-205ENST00000581055 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
TOP2A-205ENST00000581055 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
TOP2A-205ENST00000581055 CEP170Q5SW79 1584 aa30.39■■■□□ 2.46
TOP2A-205ENST00000581055 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
TOP2A-205ENST00000581055 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
TOP2A-205ENST00000581055 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
TOP2A-205ENST00000581055 RAPGEF2Q9Y4G8 1499 aa30.28■■■□□ 2.44
TOP2A-205ENST00000581055 EEA1Q15075 1411 aa30.27■■■□□ 2.44
TOP2A-205ENST00000581055 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms