RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CDK5RAP3-219ENST00000580670 CLIP1P30622 1438 aa22.1■■□□□ 1.13
CDK5RAP3-219ENST00000580670 CHD1O14646 1710 aa22.05■■□□□ 1.12
CDK5RAP3-219ENST00000580670 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
CDK5RAP3-219ENST00000580670 NUP160Q12769 1436 aa22.02■■□□□ 1.12
CDK5RAP3-219ENST00000580670 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
CDK5RAP3-219ENST00000580670 IQGAP2Q13576 1575 aa22■■□□□ 1.11
CDK5RAP3-219ENST00000580670 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CDK5RAP3-219ENST00000580670 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
CDK5RAP3-219ENST00000580670 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
CDK5RAP3-219ENST00000580670 UGGT2Q9NYU1 1516 aa21.89■■□□□ 1.09
CDK5RAP3-219ENST00000580670 P3H3Q8IVL6 736 aa21.89■■□□□ 1.09
CDK5RAP3-219ENST00000580670 SAMD9Q5K651 1589 aa21.88■■□□□ 1.09
CDK5RAP3-219ENST00000580670 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
CDK5RAP3-219ENST00000580670 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
CDK5RAP3-219ENST00000580670 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
CDK5RAP3-219ENST00000580670 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
CDK5RAP3-219ENST00000580670 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
CDK5RAP3-219ENST00000580670 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
CDK5RAP3-219ENST00000580670 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
CDK5RAP3-219ENST00000580670 CARMIL2Q6F5E8 1435 aa21.76■■□□□ 1.07
CDK5RAP3-219ENST00000580670 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
CDK5RAP3-219ENST00000580670 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
CDK5RAP3-219ENST00000580670 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
CDK5RAP3-219ENST00000580670 PCF11O94913 1555 aaKnown RBP21.67■■□□□ 1.06
CDK5RAP3-219ENST00000580670 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-219ENST00000580670 CASKIN1Q8WXD9 1431 aa21.65■■□□□ 1.06
CDK5RAP3-219ENST00000580670 APLP2Q06481 763 aa21.64■■□□□ 1.06
CDK5RAP3-219ENST00000580670 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
CDK5RAP3-219ENST00000580670 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
CDK5RAP3-219ENST00000580670 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
CDK5RAP3-219ENST00000580670 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
CDK5RAP3-219ENST00000580670 PTPRGP23470 1445 aa21.57■■□□□ 1.04
CDK5RAP3-219ENST00000580670 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
CDK5RAP3-219ENST00000580670 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
CDK5RAP3-219ENST00000580670 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
CDK5RAP3-219ENST00000580670 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
CDK5RAP3-219ENST00000580670 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
CDK5RAP3-219ENST00000580670 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
CDK5RAP3-219ENST00000580670 ABCA8O94911 1581 aa21.49■■□□□ 1.03
CDK5RAP3-219ENST00000580670 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
CDK5RAP3-219ENST00000580670 NUP153P49790 1475 aaKnown RBP21.47■■□□□ 1.03
CDK5RAP3-219ENST00000580670 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
CDK5RAP3-219ENST00000580670 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
CDK5RAP3-219ENST00000580670 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
CDK5RAP3-219ENST00000580670 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
CDK5RAP3-219ENST00000580670 UACAQ9BZF9 1416 aa21.43■■□□□ 1.02
CDK5RAP3-219ENST00000580670 CDK13Q14004 1512 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP3-219ENST00000580670 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
CDK5RAP3-219ENST00000580670 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
CDK5RAP3-219ENST00000580670 ABCC2Q92887 1545 aa21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
CDK5RAP3-219ENST00000580670 UHRF1BP1LA0JNW5 1464 aa21.34■■□□□ 1.01
CDK5RAP3-219ENST00000580670 ATP10BO94823 1461 aa21.34■■□□□ 1.01
CDK5RAP3-219ENST00000580670 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1
CDK5RAP3-219ENST00000580670 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
CDK5RAP3-219ENST00000580670 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
CDK5RAP3-219ENST00000580670 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
CDK5RAP3-219ENST00000580670 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PLEKHD1A6NEE1 506 aa21.24■□□□□ 0.99
CDK5RAP3-219ENST00000580670 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 NCOA2Q15596 1464 aa21.22■□□□□ 0.99
CDK5RAP3-219ENST00000580670 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
CDK5RAP3-219ENST00000580670 NPM1P06748 294 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDK5RAP3-219ENST00000580670 KIF14Q15058 1648 aa21.13■□□□□ 0.97
CDK5RAP3-219ENST00000580670 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
CDK5RAP3-219ENST00000580670 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
CDK5RAP3-219ENST00000580670 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
CDK5RAP3-219ENST00000580670 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
CDK5RAP3-219ENST00000580670 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
CDK5RAP3-219ENST00000580670 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
CDK5RAP3-219ENST00000580670 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
CDK5RAP3-219ENST00000580670 ASXL2Q76L83 1435 aa21.06■□□□□ 0.96
CDK5RAP3-219ENST00000580670 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-219ENST00000580670 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-219ENST00000580670 MIA2Q96PC5 1412 aa21.02■□□□□ 0.95
CDK5RAP3-219ENST00000580670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.01■□□□□ 0.953e-9■■□□□ 12.3
CDK5RAP3-219ENST00000580670 ITSN2Q9NZM3 1697 aa21.01■□□□□ 0.95
CDK5RAP3-219ENST00000580670 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
CDK5RAP3-219ENST00000580670 TTC37Q6PGP7 1564 aa20.99■□□□□ 0.95
CDK5RAP3-219ENST00000580670 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
CDK5RAP3-219ENST00000580670 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
CDK5RAP3-219ENST00000580670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
CDK5RAP3-219ENST00000580670 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
CDK5RAP3-219ENST00000580670 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
CDK5RAP3-219ENST00000580670 ITGAEP38570 1179 aa20.95■□□□□ 0.94
CDK5RAP3-219ENST00000580670 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
CDK5RAP3-219ENST00000580670 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
CDK5RAP3-219ENST00000580670 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
CDK5RAP3-219ENST00000580670 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms