RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 PPP6R1Q9UPN7 881 aa7.24□□□□□ -1.25
NUP85-213ENST00000579838 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
NUP85-213ENST00000579838 C1QBPQ07021 282 aaKnown RBP7.23□□□□□ -1.25
NUP85-213ENST00000579838 PDS5BQ9NTI5 1447 aa7.23□□□□□ -1.25
NUP85-213ENST00000579838 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
NUP85-213ENST00000579838 THOC2Q8NI27 1593 aaKnown RBP7.23□□□□□ -1.25
NUP85-213ENST00000579838 CARMIL1Q5VZK9 1371 aa7.22□□□□□ -1.25
NUP85-213ENST00000579838 DMRT2Q9Y5R5 561 aa7.22□□□□□ -1.25
NUP85-213ENST00000579838 MRC2Q9UBG0 1479 aa7.22□□□□□ -1.25
NUP85-213ENST00000579838 WDR62O43379 1518 aa7.21□□□□□ -1.26
NUP85-213ENST00000579838 ADAMTS12P58397 1594 aa7.2□□□□□ -1.26
NUP85-213ENST00000579838 PLSCR2Q9NRY7 297 aa7.2□□□□□ -1.26
NUP85-213ENST00000579838 TIAM1Q13009 1591 aa7.2□□□□□ -1.26
NUP85-213ENST00000579838 SAMD9Q5K651 1589 aa7.2□□□□□ -1.26
NUP85-213ENST00000579838 GAPVD1Q14C86 1478 aa7.19□□□□□ -1.26
NUP85-213ENST00000579838 TDRD9Q8NDG6 1382 aaKnown RBP7.19□□□□□ -1.26
NUP85-213ENST00000579838 EIF4G3O43432 1585 aaKnown RBP7.18□□□□□ -1.26
NUP85-213ENST00000579838 EFCAB5A4FU69 1503 aa7.17□□□□□ -1.26
NUP85-213ENST00000579838 ZNF608Q9ULD9 1512 aaPredicted RBP7.17□□□□□ -1.26
NUP85-213ENST00000579838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.16□□□□□ -1.26
NUP85-213ENST00000579838 KANK4Q5T7N3 995 aaPredicted RBP7.16□□□□□ -1.26
NUP85-213ENST00000579838 FHOD3Q2V2M9 1422 aa7.16□□□□□ -1.26
NUP85-213ENST00000579838 AQRO60306 1485 aaKnown RBP eCLIP7.15□□□□□ -1.277e-7■■□□□ 12.5
NUP85-213ENST00000579838 MAP3K1Q13233 1512 aa7.13□□□□□ -1.27
NUP85-213ENST00000579838 SNAPC4Q5SXM2 1469 aa7.13□□□□□ -1.27
NUP85-213ENST00000579838 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
NUP85-213ENST00000579838 RRBP1Q9P2E9 1410 aaKnown RBP7.11□□□□□ -1.27
NUP85-213ENST00000579838 P3H3Q8IVL6 736 aa7.11□□□□□ -1.27
NUP85-213ENST00000579838 IQGAP2Q13576 1575 aa7.11□□□□□ -1.27
NUP85-213ENST00000579838 LRRC9Q6ZRR7 1453 aa7.11□□□□□ -1.27
NUP85-213ENST00000579838 FYCO1Q9BQS8 1478 aa7.11□□□□□ -1.27
NUP85-213ENST00000579838 ADRA2BP18089 450 aa7.1□□□□□ -1.27
NUP85-213ENST00000579838 GRIN2BQ13224 1484 aa7.1□□□□□ -1.27
NUP85-213ENST00000579838 ZEB1P37275 1124 aaPredicted RBP7.09□□□□□ -1.27
NUP85-213ENST00000579838 HNRNPUL2Q1KMD3 747 aaKnown RBP7.09□□□□□ -1.27
NUP85-213ENST00000579838 MAGI3Q5TCQ9 1506 aa7.09□□□□□ -1.27
NUP85-213ENST00000579838 ERCC6Q03468 1493 aa7.09□□□□□ -1.27
NUP85-213ENST00000579838 FHAD1B1AJZ9 1412 aa7.09□□□□□ -1.28
NUP85-213ENST00000579838 CASKIN1Q8WXD9 1431 aa7.09□□□□□ -1.28
NUP85-213ENST00000579838 CEP170Q5SW79 1584 aa7.08□□□□□ -1.28
NUP85-213ENST00000579838 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
NUP85-213ENST00000579838 APLP2Q06481 763 aa7.07□□□□□ -1.28
NUP85-213ENST00000579838 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
NUP85-213ENST00000579838 SP7Q8TDD2 431 aaPredicted RBP7.07□□□□□ -1.28
NUP85-213ENST00000579838 KIAA0556O60303 1618 aa7.07□□□□□ -1.28
NUP85-213ENST00000579838 PHLDB1Q86UU1 1377 aa7.07□□□□□ -1.28
NUP85-213ENST00000579838 UGGT2Q9NYU1 1516 aa7.06□□□□□ -1.28
NUP85-213ENST00000579838 HECW1Q76N89 1606 aa7.05□□□□□ -1.28
NUP85-213ENST00000579838 GRIN2AQ12879 1464 aa7.05□□□□□ -1.28
NUP85-213ENST00000579838 CHD1O14646 1710 aa7.04□□□□□ -1.28
NUP85-213ENST00000579838 DISP1Q96F81 1524 aa7.04□□□□□ -1.28
NUP85-213ENST00000579838 SUPT6HQ7KZ85 1726 aaKnown RBP7.04□□□□□ -1.28
NUP85-213ENST00000579838 CDK13Q14004 1512 aaKnown RBP7.03□□□□□ -1.28
NUP85-213ENST00000579838 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
NUP85-213ENST00000579838 FMN1Q68DA7 1419 aa7.02□□□□□ -1.29
NUP85-213ENST00000579838 ARHGEF11O15085 1522 aa7.02□□□□□ -1.29
NUP85-213ENST00000579838 EHBP1L1Q8N3D4 1523 aa7.02□□□□□ -1.29
NUP85-213ENST00000579838 MAGI1Q96QZ7 1491 aaPredicted RBP7.02□□□□□ -1.29
NUP85-213ENST00000579838 RAPGEF6Q8TEU7 1601 aa7.01□□□□□ -1.29
NUP85-213ENST00000579838 DHX57Q6P158 1386 aaKnown RBP7.01□□□□□ -1.29
NUP85-213ENST00000579838 KIAA0586Q9BVV6 1533 aa7.01□□□□□ -1.29
NUP85-213ENST00000579838 SYNJ2O15056 1496 aa7□□□□□ -1.29
NUP85-213ENST00000579838 PTPN23Q9H3S7 1636 aa7□□□□□ -1.29
NUP85-213ENST00000579838 MAPKBP1O60336 1514 aa7□□□□□ -1.29
NUP85-213ENST00000579838 NCOA2Q15596 1464 aa6.99□□□□□ -1.29
NUP85-213ENST00000579838 ATP1B4Q9UN42 357 aaPredicted RBP6.99□□□□□ -1.29
NUP85-213ENST00000579838 EPRSP07814 1512 aaKnown RBP6.99□□□□□ -1.29
NUP85-213ENST00000579838 CCDC18Q5T9S5 1454 aa6.98□□□□□ -1.29
NUP85-213ENST00000579838 NUP160Q12769 1436 aa6.98□□□□□ -1.29
NUP85-213ENST00000579838 FGD6Q6ZV73 1430 aa6.98□□□□□ -1.29
NUP85-213ENST00000579838 GCC2Q8IWJ2 1684 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 ITGAEP38570 1179 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 KDM6BO15054 1643 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 KIF14Q15058 1648 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 ADCY10Q96PN6 1610 aa6.97□□□□□ -1.29
NUP85-213ENST00000579838 NUP153P49790 1475 aaKnown RBP6.97□□□□□ -1.29
NUP85-213ENST00000579838 RAB3GAP2Q9H2M9 1393 aa6.96□□□□□ -1.29
NUP85-213ENST00000579838 MYOM3Q5VTT5 1437 aa6.95□□□□□ -1.3
NUP85-213ENST00000579838 SHROOM2Q13796 1616 aa6.95□□□□□ -1.3
NUP85-213ENST00000579838 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
NUP85-213ENST00000579838 ABCA8O94911 1581 aa6.95□□□□□ -1.3
NUP85-213ENST00000579838 MTUS2Q5JR59 1369 aa6.95□□□□□ -1.3
NUP85-213ENST00000579838 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
NUP85-213ENST00000579838 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
NUP85-213ENST00000579838 SETD5Q9C0A6 1442 aa6.93□□□□□ -1.3
NUP85-213ENST00000579838 PLB1Q6P1J6 1458 aa6.93□□□□□ -1.3
NUP85-213ENST00000579838 FAM50AQ14320 339 aaKnown RBP6.93□□□□□ -1.3
NUP85-213ENST00000579838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.93□□□□□ -1.3
NUP85-213ENST00000579838 CDC42BPAQ5VT25 1732 aa6.93□□□□□ -1.3
NUP85-213ENST00000579838 ARID3CA6NKF2 412 aa6.92□□□□□ -1.3
NUP85-213ENST00000579838 ITSN2Q9NZM3 1697 aa6.92□□□□□ -1.3
NUP85-213ENST00000579838 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
NUP85-213ENST00000579838 ADGBQ8N7X0 1667 aa6.91□□□□□ -1.3
NUP85-213ENST00000579838 MAPK8IP2Q13387 824 aaPredicted RBP6.91□□□□□ -1.3
NUP85-213ENST00000579838 CHMP7Q8WUX9 453 aaPredicted RBP6.89□□□□□ -1.31
NUP85-213ENST00000579838 NAIPQ13075 1403 aa6.89□□□□□ -1.31
NUP85-213ENST00000579838 PRG4Q92954 1404 aaPredicted RBP6.89□□□□□ -1.31
NUP85-213ENST00000579838 CLASP1Q7Z460 1538 aa6.89□□□□□ -1.31
NUP85-213ENST00000579838 DENND4BO75064 1496 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms