RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 NUP160Q12769 1436 aa27.1■■□□□ 1.93
SREBF1-218ENST00000578469 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
SREBF1-218ENST00000578469 KIF21BO75037 1637 aa27.08■■□□□ 1.93
SREBF1-218ENST00000578469 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
SREBF1-218ENST00000578469 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
SREBF1-218ENST00000578469 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
SREBF1-218ENST00000578469 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
SREBF1-218ENST00000578469 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
SREBF1-218ENST00000578469 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
SREBF1-218ENST00000578469 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
SREBF1-218ENST00000578469 RAPGEF2Q9Y4G8 1499 aa26.88■■□□□ 1.89
SREBF1-218ENST00000578469 PRG4Q92954 1404 aaPredicted RBP26.87■■□□□ 1.89
SREBF1-218ENST00000578469 IGF1RP08069 1367 aa26.86■■□□□ 1.89
SREBF1-218ENST00000578469 CEP162Q5TB80 1403 aa26.85■■□□□ 1.89
SREBF1-218ENST00000578469 KIF13AQ9H1H9 1805 aa26.81■■□□□ 1.88
SREBF1-218ENST00000578469 JPH4Q96JJ6 628 aa26.79■■□□□ 1.88
SREBF1-218ENST00000578469 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
SREBF1-218ENST00000578469 NPM1P06748 294 aaKnown RBP eCLIP26.73■■□□□ 1.87
SREBF1-218ENST00000578469 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
SREBF1-218ENST00000578469 MAPKBP1O60336 1514 aa26.68■■□□□ 1.86
SREBF1-218ENST00000578469 CUL7Q14999 1698 aa26.66■■□□□ 1.86
SREBF1-218ENST00000578469 FAM69CQ0P6D2 419 aa26.66■■□□□ 1.86
SREBF1-218ENST00000578469 CLIP1P30622 1438 aa26.65■■□□□ 1.86
SREBF1-218ENST00000578469 DIP2BQ9P265 1576 aa26.61■■□□□ 1.85
SREBF1-218ENST00000578469 ADCY10Q96PN6 1610 aa26.6■■□□□ 1.85
SREBF1-218ENST00000578469 KIAA0586Q9BVV6 1533 aa26.59■■□□□ 1.85
SREBF1-218ENST00000578469 KDM6BO15054 1643 aa26.51■■□□□ 1.83
SREBF1-218ENST00000578469 RANGAP1P46060 587 aaPredicted RBP26.49■■□□□ 1.83
SREBF1-218ENST00000578469 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
SREBF1-218ENST00000578469 VPS8Q8N3P4 1428 aa26.43■■□□□ 1.82
SREBF1-218ENST00000578469 TSPOAP1O95153 1857 aa26.42■■□□□ 1.82
SREBF1-218ENST00000578469 PTPRGP23470 1445 aa26.41■■□□□ 1.82
SREBF1-218ENST00000578469 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.82
SREBF1-218ENST00000578469 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
SREBF1-218ENST00000578469 CTTNBP2Q8WZ74 1663 aa26.34■■□□□ 1.81
SREBF1-218ENST00000578469 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
SREBF1-218ENST00000578469 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
SREBF1-218ENST00000578469 TTBK1Q5TCY1 1321 aaPredicted RBP26.33■■□□□ 1.81
SREBF1-218ENST00000578469 IQGAP2Q13576 1575 aa26.31■■□□□ 1.8
SREBF1-218ENST00000578469 PLB1Q6P1J6 1458 aa26.3■■□□□ 1.8
SREBF1-218ENST00000578469 APLP2Q06481 763 aa26.29■■□□□ 1.8
SREBF1-218ENST00000578469 KDM4FA0A1W2PPD8 638 aa26.27■■□□□ 1.8
SREBF1-218ENST00000578469 ASXL2Q76L83 1435 aa26.26■■□□□ 1.79
SREBF1-218ENST00000578469 PPARGC1BQ86YN6 1023 aaKnown RBP26.25■■□□□ 1.79
SREBF1-218ENST00000578469 EFCAB5A4FU69 1503 aa26.24■■□□□ 1.79
SREBF1-218ENST00000578469 GLI2P10070 1586 aa26.24■■□□□ 1.79
SREBF1-218ENST00000578469 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
SREBF1-218ENST00000578469 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
SREBF1-218ENST00000578469 PPRC1Q5VV67 1664 aaKnown RBP26.16■■□□□ 1.78
SREBF1-218ENST00000578469 DISP1Q96F81 1524 aa26.14■■□□□ 1.78
SREBF1-218ENST00000578469 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
SREBF1-218ENST00000578469 KDM5BQ9UGL1 1544 aa26.11■■□□□ 1.77
SREBF1-218ENST00000578469 EPRSP07814 1512 aaKnown RBP26.1■■□□□ 1.77
SREBF1-218ENST00000578469 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
SREBF1-218ENST00000578469 P3H3Q8IVL6 736 aa26.09■■□□□ 1.77
SREBF1-218ENST00000578469 MAP3K4Q9Y6R4 1608 aa26.08■■□□□ 1.77
SREBF1-218ENST00000578469 ADGRL1O94910 1474 aa26.08■■□□□ 1.77
SREBF1-218ENST00000578469 SAMD9Q5K651 1589 aa26.07■■□□□ 1.76
SREBF1-218ENST00000578469 KIAA0556O60303 1618 aa26.06■■□□□ 1.76
SREBF1-218ENST00000578469 ZCCHC11Q5TAX3 1644 aaKnown RBP26.06■■□□□ 1.76
SREBF1-218ENST00000578469 FHOD3Q2V2M9 1422 aa26.06■■□□□ 1.76
SREBF1-218ENST00000578469 FMN1Q68DA7 1419 aa26.03■■□□□ 1.76
SREBF1-218ENST00000578469 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
SREBF1-218ENST00000578469 MAP3K1Q13233 1512 aa25.98■■□□□ 1.75
SREBF1-218ENST00000578469 COL17A1Q9UMD9 1497 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-218ENST00000578469 FYCO1Q9BQS8 1478 aa25.95■■□□□ 1.74
SREBF1-218ENST00000578469 CASKIN1Q8WXD9 1431 aa25.95■■□□□ 1.74
SREBF1-218ENST00000578469 PCF11O94913 1555 aaKnown RBP25.93■■□□□ 1.74
SREBF1-218ENST00000578469 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
SREBF1-218ENST00000578469 TIAM1Q13009 1591 aa25.89■■□□□ 1.73
SREBF1-218ENST00000578469 KANK4Q5T7N3 995 aaPredicted RBP25.87■■□□□ 1.73
SREBF1-218ENST00000578469 ILDR1Q86SU0 546 aaPredicted RBP25.87■■□□□ 1.73
SREBF1-218ENST00000578469 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
SREBF1-218ENST00000578469 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
SREBF1-218ENST00000578469 CD109Q6YHK3 1445 aa25.84■■□□□ 1.73
SREBF1-218ENST00000578469 HECW2Q9P2P5 1572 aa25.84■■□□□ 1.73
SREBF1-218ENST00000578469 ABCA8O94911 1581 aa25.82■■□□□ 1.72
SREBF1-218ENST00000578469 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
SREBF1-218ENST00000578469 KCNH8Q96L42 1107 aa25.77■■□□□ 1.72
SREBF1-218ENST00000578469 HECW1Q76N89 1606 aa25.72■■□□□ 1.71
SREBF1-218ENST00000578469 CCDC18Q5T9S5 1454 aa25.71■■□□□ 1.71
SREBF1-218ENST00000578469 HRCP23327 699 aa25.69■■□□□ 1.7
SREBF1-218ENST00000578469 ARAP3Q8WWN8 1544 aa25.64■■□□□ 1.7
SREBF1-218ENST00000578469 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
SREBF1-218ENST00000578469 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
SREBF1-218ENST00000578469 PHLDB1Q86UU1 1377 aa25.6■■□□□ 1.69
SREBF1-218ENST00000578469 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
SREBF1-218ENST00000578469 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
SREBF1-218ENST00000578469 ARID3CA6NKF2 412 aa25.58■■□□□ 1.69
SREBF1-218ENST00000578469 CCNB3Q8WWL7 1395 aa25.57■■□□□ 1.68
SREBF1-218ENST00000578469 ABCA9Q8IUA7 1624 aa25.57■■□□□ 1.68
SREBF1-218ENST00000578469 ATP10BO94823 1461 aa25.57■■□□□ 1.68
SREBF1-218ENST00000578469 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
SREBF1-218ENST00000578469 HNRNPUL2Q1KMD3 747 aaKnown RBP25.55■■□□□ 1.68
SREBF1-218ENST00000578469 NEO1Q92859 1461 aa25.51■■□□□ 1.67
SREBF1-218ENST00000578469 ZEB1P37275 1124 aaPredicted RBP25.5■■□□□ 1.67
SREBF1-218ENST00000578469 NUP153P49790 1475 aaKnown RBP25.5■■□□□ 1.67
SREBF1-218ENST00000578469 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
SREBF1-218ENST00000578469 SUPT6HQ7KZ85 1726 aaKnown RBP25.49■■□□□ 1.67
SREBF1-218ENST00000578469 CDK13Q14004 1512 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms