RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
LIMD2-205ENST00000578402 SYNJ2O15056 1496 aa36.02■■■■□ 3.36
LIMD2-205ENST00000578402 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
LIMD2-205ENST00000578402 GRIN2AQ12879 1464 aa35.99■■■■□ 3.35
LIMD2-205ENST00000578402 EFCAB5A4FU69 1503 aa35.98■■■■□ 3.35
LIMD2-205ENST00000578402 IQGAP2Q13576 1575 aa35.87■■■■□ 3.33
LIMD2-205ENST00000578402 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
LIMD2-205ENST00000578402 SAMD9Q5K651 1589 aa35.84■■■■□ 3.33
LIMD2-205ENST00000578402 KIAA0586Q9BVV6 1533 aa35.82■■■■□ 3.33
LIMD2-205ENST00000578402 NUP160Q12769 1436 aa35.76■■■■□ 3.32
LIMD2-205ENST00000578402 CEP170Q5SW79 1584 aa35.74■■■■□ 3.31
LIMD2-205ENST00000578402 UGGT2Q9NYU1 1516 aa35.73■■■■□ 3.31
LIMD2-205ENST00000578402 TRIM26Q12899 539 aaPredicted RBP35.67■■■■□ 3.3
LIMD2-205ENST00000578402 FHOD3Q2V2M9 1422 aa35.67■■■■□ 3.3
LIMD2-205ENST00000578402 FBLN2P98095 1184 aa35.67■■■■□ 3.3
LIMD2-205ENST00000578402 APLP2Q06481 763 aa35.63■■■■□ 3.29
LIMD2-205ENST00000578402 FMN1Q68DA7 1419 aa35.62■■■■□ 3.29
LIMD2-205ENST00000578402 CHD1O14646 1710 aa35.61■■■■□ 3.29
LIMD2-205ENST00000578402 P3H3Q8IVL6 736 aa35.58■■■■□ 3.29
LIMD2-205ENST00000578402 MAP3K1Q13233 1512 aa35.54■■■■□ 3.28
LIMD2-205ENST00000578402 FYCO1Q9BQS8 1478 aa35.54■■■■□ 3.28
LIMD2-205ENST00000578402 PCF11O94913 1555 aaKnown RBP35.53■■■■□ 3.28
LIMD2-205ENST00000578402 CASKIN1Q8WXD9 1431 aa35.53■■■■□ 3.28
LIMD2-205ENST00000578402 PPARGC1BQ86YN6 1023 aaKnown RBP35.52■■■■□ 3.28
LIMD2-205ENST00000578402 KIAA0556O60303 1618 aa35.51■■■■□ 3.27
LIMD2-205ENST00000578402 PCGF6Q9BYE7 350 aa35.5■■■■□ 3.27
LIMD2-205ENST00000578402 DISP1Q96F81 1524 aa35.5■■■■□ 3.27
LIMD2-205ENST00000578402 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
LIMD2-205ENST00000578402 JPH4Q96JJ6 628 aa35.39■■■■□ 3.26
LIMD2-205ENST00000578402 CFAP43Q8NDM7 1665 aa35.38■■■■□ 3.25
LIMD2-205ENST00000578402 CARMIL2Q6F5E8 1435 aa35.38■■■■□ 3.25
LIMD2-205ENST00000578402 SHROOM2Q13796 1616 aa35.31■■■■□ 3.24
LIMD2-205ENST00000578402 HECW1Q76N89 1606 aa35.27■■■■□ 3.24
LIMD2-205ENST00000578402 CLASP1Q7Z460 1538 aa35.26■■■■□ 3.24
LIMD2-205ENST00000578402 KANK4Q5T7N3 995 aaPredicted RBP35.26■■■■□ 3.23
LIMD2-205ENST00000578402 TTBK1Q5TCY1 1321 aaPredicted RBP35.25■■■■□ 3.23
LIMD2-205ENST00000578402 LRRC9Q6ZRR7 1453 aa35.24■■■■□ 3.23
LIMD2-205ENST00000578402 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
LIMD2-205ENST00000578402 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.22
LIMD2-205ENST00000578402 ATP1B4Q9UN42 357 aaPredicted RBP35.19■■■■□ 3.22
LIMD2-205ENST00000578402 LRRIQ1Q96JM4 1722 aa35.18■■■■□ 3.22
LIMD2-205ENST00000578402 RAPGEF6Q8TEU7 1601 aa35.15■■■■□ 3.22
LIMD2-205ENST00000578402 OSCARQ8IYS5 282 aa35.11■■■■□ 3.21
LIMD2-205ENST00000578402 EPRSP07814 1512 aaKnown RBP35.09■■■■□ 3.21
LIMD2-205ENST00000578402 NUP153P49790 1475 aaKnown RBP35.04■■■■□ 3.2
LIMD2-205ENST00000578402 EHBP1L1Q8N3D4 1523 aa35.01■■■■□ 3.2
LIMD2-205ENST00000578402 ABCA8O94911 1581 aa35.01■■■■□ 3.2
LIMD2-205ENST00000578402 PLB1Q6P1J6 1458 aa34.99■■■■□ 3.19
LIMD2-205ENST00000578402 MTUS2Q5JR59 1369 aa34.99■■■■□ 3.19
LIMD2-205ENST00000578402 PTPRGP23470 1445 aa34.98■■■■□ 3.19
LIMD2-205ENST00000578402 RRBP1Q9P2E9 1410 aaKnown RBP34.98■■■■□ 3.19
LIMD2-205ENST00000578402 CDK13Q14004 1512 aaKnown RBP34.94■■■■□ 3.18
LIMD2-205ENST00000578402 ERCC6L2Q5T890 1561 aa34.92■■■■□ 3.18
LIMD2-205ENST00000578402 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
LIMD2-205ENST00000578402 MAGI3Q5TCQ9 1506 aa34.89■■■■□ 3.18
LIMD2-205ENST00000578402 PHLDB1Q86UU1 1377 aa34.86■■■■□ 3.17
LIMD2-205ENST00000578402 CCNB3Q8WWL7 1395 aa34.83■■■■□ 3.17
LIMD2-205ENST00000578402 ARHGEF11O15085 1522 aa34.82■■■■□ 3.17
LIMD2-205ENST00000578402 UACAQ9BZF9 1416 aa34.81■■■■□ 3.16
LIMD2-205ENST00000578402 CDK11AQ9UQ88 783 aaPredicted RBP34.81■■■■□ 3.16
LIMD2-205ENST00000578402 NCOA2Q15596 1464 aa34.81■■■■□ 3.16
LIMD2-205ENST00000578402 ABCC2Q92887 1545 aa34.73■■■■□ 3.15
LIMD2-205ENST00000578402 ATP10BO94823 1461 aa34.73■■■■□ 3.15
LIMD2-205ENST00000578402 ARID3CA6NKF2 412 aa34.71■■■■□ 3.15
LIMD2-205ENST00000578402 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
LIMD2-205ENST00000578402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.7■■■■□ 3.15
LIMD2-205ENST00000578402 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.14
LIMD2-205ENST00000578402 MYOM3Q5VTT5 1437 aa34.69■■■■□ 3.14
LIMD2-205ENST00000578402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.68■■■■□ 3.14
LIMD2-205ENST00000578402 HNRNPUL2Q1KMD3 747 aaKnown RBP34.68■■■■□ 3.14
LIMD2-205ENST00000578402 FGD6Q6ZV73 1430 aa34.67■■■■□ 3.14
LIMD2-205ENST00000578402 ADCY10Q96PN6 1610 aa34.66■■■■□ 3.14
LIMD2-205ENST00000578402 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
LIMD2-205ENST00000578402 PLEKHD1A6NEE1 506 aa34.56■■■■□ 3.12
LIMD2-205ENST00000578402 MIA2Q96PC5 1412 aa34.55■■■■□ 3.12
LIMD2-205ENST00000578402 KDM5BQ9UGL1 1544 aa34.53■■■■□ 3.12
LIMD2-205ENST00000578402 KIF14Q15058 1648 aa34.52■■■■□ 3.12
LIMD2-205ENST00000578402 TCOF1Q13428 1488 aaKnown RBP34.5■■■■□ 3.11
LIMD2-205ENST00000578402 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
LIMD2-205ENST00000578402 FAM50AQ14320 339 aaKnown RBP34.48■■■■□ 3.11
LIMD2-205ENST00000578402 HRCP23327 699 aa34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ZCCHC11Q5TAX3 1644 aaKnown RBP34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ITSN2Q9NZM3 1697 aa34.46■■■■□ 3.11
LIMD2-205ENST00000578402 ABCC10Q5T3U5 1492 aa34.42■■■■□ 3.1
LIMD2-205ENST00000578402 GPATCH8Q9UKJ3 1502 aaKnown RBP34.37■■■■□ 3.09
LIMD2-205ENST00000578402 ITGAEP38570 1179 aa34.32■■■■□ 3.08
LIMD2-205ENST00000578402 CDC42BPAQ5VT25 1732 aa34.3■■■■□ 3.08
LIMD2-205ENST00000578402 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
LIMD2-205ENST00000578402 ZEB1P37275 1124 aaPredicted RBP34.25■■■■□ 3.07
LIMD2-205ENST00000578402 CFDP1Q9UEE9 299 aaPredicted RBP34.24■■■■□ 3.07
LIMD2-205ENST00000578402 CCER1Q8TC90 406 aaPredicted RBP34.22■■■■□ 3.07
LIMD2-205ENST00000578402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.22■■■■□ 3.07
LIMD2-205ENST00000578402 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
LIMD2-205ENST00000578402 CAMSAP2Q08AD1 1489 aa34.2■■■■□ 3.07
LIMD2-205ENST00000578402 PTPRKQ15262 1439 aa34.19■■■■□ 3.06
LIMD2-205ENST00000578402 SETD5Q9C0A6 1442 aa34.19■■■■□ 3.06
LIMD2-205ENST00000578402 DNMT1P26358 1616 aaKnown RBP34.19■■■■□ 3.06
LIMD2-205ENST00000578402 WDR7Q9Y4E6 1490 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms