RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
CCDC57-211ENST00000578187 CUL7Q14999 1698 aa21.94■■□□□ 1.1
CCDC57-211ENST00000578187 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
CCDC57-211ENST00000578187 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
CCDC57-211ENST00000578187 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
CCDC57-211ENST00000578187 IGF1RP08069 1367 aa21.87■■□□□ 1.09
CCDC57-211ENST00000578187 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
CCDC57-211ENST00000578187 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
CCDC57-211ENST00000578187 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
CCDC57-211ENST00000578187 CARMIL2Q6F5E8 1435 aa21.66■■□□□ 1.06
CCDC57-211ENST00000578187 IQGAP2Q13576 1575 aa21.65■■□□□ 1.06
CCDC57-211ENST00000578187 ADCY10Q96PN6 1610 aa21.65■■□□□ 1.06
CCDC57-211ENST00000578187 KIF13AQ9H1H9 1805 aa21.64■■□□□ 1.06
CCDC57-211ENST00000578187 MAPKBP1O60336 1514 aa21.64■■□□□ 1.05
CCDC57-211ENST00000578187 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
CCDC57-211ENST00000578187 PTPRGP23470 1445 aa21.61■■□□□ 1.05
CCDC57-211ENST00000578187 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
CCDC57-211ENST00000578187 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
CCDC57-211ENST00000578187 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
CCDC57-211ENST00000578187 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
CCDC57-211ENST00000578187 DIP2BQ9P265 1576 aa21.54■■□□□ 1.04
CCDC57-211ENST00000578187 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
CCDC57-211ENST00000578187 ABCC2Q92887 1545 aa21.48■■□□□ 1.03
CCDC57-211ENST00000578187 EEA1Q15075 1411 aa21.47■■□□□ 1.03
CCDC57-211ENST00000578187 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
CCDC57-211ENST00000578187 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
CCDC57-211ENST00000578187 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
CCDC57-211ENST00000578187 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
CCDC57-211ENST00000578187 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
CCDC57-211ENST00000578187 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CCDC57-211ENST00000578187 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
CCDC57-211ENST00000578187 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
CCDC57-211ENST00000578187 TSPOAP1O95153 1857 aa21.39■■□□□ 1.01
CCDC57-211ENST00000578187 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
CCDC57-211ENST00000578187 KDM6BO15054 1643 aa21.37■■□□□ 1.01
CCDC57-211ENST00000578187 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
CCDC57-211ENST00000578187 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
CCDC57-211ENST00000578187 GLI2P10070 1586 aa21.33■■□□□ 1.01
CCDC57-211ENST00000578187 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
CCDC57-211ENST00000578187 KIF21BO75037 1637 aa21.32■■□□□ 1
CCDC57-211ENST00000578187 ZCCHC11Q5TAX3 1644 aaKnown RBP21.32■■□□□ 1
CCDC57-211ENST00000578187 EPRSP07814 1512 aaKnown RBP21.25■□□□□ 0.99
CCDC57-211ENST00000578187 TEX14Q8IWB6 1497 aa21.22■□□□□ 0.99
CCDC57-211ENST00000578187 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
CCDC57-211ENST00000578187 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
CCDC57-211ENST00000578187 PPRC1Q5VV67 1664 aaKnown RBP21.21■□□□□ 0.99
CCDC57-211ENST00000578187 ABCA8O94911 1581 aa21.2■□□□□ 0.98
CCDC57-211ENST00000578187 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
CCDC57-211ENST00000578187 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
CCDC57-211ENST00000578187 CFAP43Q8NDM7 1665 aa21.11■□□□□ 0.97
CCDC57-211ENST00000578187 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
CCDC57-211ENST00000578187 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
CCDC57-211ENST00000578187 MAGI3Q5TCQ9 1506 aa21.04■□□□□ 0.96
CCDC57-211ENST00000578187 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
CCDC57-211ENST00000578187 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
CCDC57-211ENST00000578187 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
CCDC57-211ENST00000578187 EFCAB5A4FU69 1503 aa21.02■□□□□ 0.96
CCDC57-211ENST00000578187 ATP10BO94823 1461 aa21.01■□□□□ 0.95
CCDC57-211ENST00000578187 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
CCDC57-211ENST00000578187 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
CCDC57-211ENST00000578187 KDM4FA0A1W2PPD8 638 aa21■□□□□ 0.95
CCDC57-211ENST00000578187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
CCDC57-211ENST00000578187 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
CCDC57-211ENST00000578187 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.95
CCDC57-211ENST00000578187 ADGRL1O94910 1474 aa20.94■□□□□ 0.94
CCDC57-211ENST00000578187 ABCA9Q8IUA7 1624 aa20.93■□□□□ 0.94
CCDC57-211ENST00000578187 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
CCDC57-211ENST00000578187 NUP153P49790 1475 aaKnown RBP20.91■□□□□ 0.94
CCDC57-211ENST00000578187 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
CCDC57-211ENST00000578187 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
CCDC57-211ENST00000578187 ARAP3Q8WWN8 1544 aa20.88■□□□□ 0.93
CCDC57-211ENST00000578187 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
CCDC57-211ENST00000578187 PLEKHD1A6NEE1 506 aa20.86■□□□□ 0.93
CCDC57-211ENST00000578187 NEO1Q92859 1461 aa20.83■□□□□ 0.93
CCDC57-211ENST00000578187 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
CCDC57-211ENST00000578187 CFAP74Q9C0B2 1584 aa20.78■□□□□ 0.92
CCDC57-211ENST00000578187 HECW1Q76N89 1606 aa20.76■□□□□ 0.91
CCDC57-211ENST00000578187 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
CCDC57-211ENST00000578187 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
CCDC57-211ENST00000578187 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
CCDC57-211ENST00000578187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC57-211ENST00000578187 FANCAO15360 1455 aa20.71■□□□□ 0.91
CCDC57-211ENST00000578187 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
CCDC57-211ENST00000578187 CLIP1P30622 1438 aa20.7■□□□□ 0.9
CCDC57-211ENST00000578187 TTC37Q6PGP7 1564 aa20.69■□□□□ 0.9
CCDC57-211ENST00000578187 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
CCDC57-211ENST00000578187 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
CCDC57-211ENST00000578187 FRMPD1Q5SYB0 1578 aa20.68■□□□□ 0.9
CCDC57-211ENST00000578187 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
CCDC57-211ENST00000578187 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
CCDC57-211ENST00000578187 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
CCDC57-211ENST00000578187 RICTORQ6R327 1708 aa20.64■□□□□ 0.89
CCDC57-211ENST00000578187 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
CCDC57-211ENST00000578187 HECW2Q9P2P5 1572 aa20.63■□□□□ 0.89
CCDC57-211ENST00000578187 KIF14Q15058 1648 aa20.62■□□□□ 0.89
CCDC57-211ENST00000578187 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
CCDC57-211ENST00000578187 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
CCDC57-211ENST00000578187 PLCH2O75038 1416 aa20.61■□□□□ 0.89
CCDC57-211ENST00000578187 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
CCDC57-211ENST00000578187 FYCO1Q9BQS8 1478 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms