RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
CCDC57-211ENST00000578187 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
CCDC57-211ENST00000578187 ABCC9O60706 1549 aa27.94■■■□□ 2.06
CCDC57-211ENST00000578187 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
CCDC57-211ENST00000578187 NACADO15069 1562 aa26.56■■□□□ 1.84
CCDC57-211ENST00000578187 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
CCDC57-211ENST00000578187 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CCDC57-211ENST00000578187 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
CCDC57-211ENST00000578187 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
CCDC57-211ENST00000578187 PABPN1Q86U42 306 aaKnown RBP eCLIP26■■□□□ 1.75
CCDC57-211ENST00000578187 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
CCDC57-211ENST00000578187 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
CCDC57-211ENST00000578187 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
CCDC57-211ENST00000578187 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
CCDC57-211ENST00000578187 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
CCDC57-211ENST00000578187 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
CCDC57-211ENST00000578187 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
CCDC57-211ENST00000578187 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
CCDC57-211ENST00000578187 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
CCDC57-211ENST00000578187 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
CCDC57-211ENST00000578187 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
CCDC57-211ENST00000578187 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
CCDC57-211ENST00000578187 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
CCDC57-211ENST00000578187 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
CCDC57-211ENST00000578187 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
CCDC57-211ENST00000578187 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
CCDC57-211ENST00000578187 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
CCDC57-211ENST00000578187 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
CCDC57-211ENST00000578187 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
CCDC57-211ENST00000578187 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
CCDC57-211ENST00000578187 CUX2O14529 1486 aa24.1■■□□□ 1.45
CCDC57-211ENST00000578187 NESP48681 1621 aa24■■□□□ 1.43
CCDC57-211ENST00000578187 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
CCDC57-211ENST00000578187 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
CCDC57-211ENST00000578187 WIZO95785 1651 aa23.86■■□□□ 1.41
CCDC57-211ENST00000578187 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
CCDC57-211ENST00000578187 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
CCDC57-211ENST00000578187 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
CCDC57-211ENST00000578187 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
CCDC57-211ENST00000578187 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
CCDC57-211ENST00000578187 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
CCDC57-211ENST00000578187 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
CCDC57-211ENST00000578187 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
CCDC57-211ENST00000578187 WDR62O43379 1518 aa23.51■■□□□ 1.35
CCDC57-211ENST00000578187 CFTRP13569 1480 aa23.49■■□□□ 1.35
CCDC57-211ENST00000578187 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
CCDC57-211ENST00000578187 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
CCDC57-211ENST00000578187 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
CCDC57-211ENST00000578187 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
CCDC57-211ENST00000578187 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
CCDC57-211ENST00000578187 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
CCDC57-211ENST00000578187 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
CCDC57-211ENST00000578187 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
CCDC57-211ENST00000578187 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
CCDC57-211ENST00000578187 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
CCDC57-211ENST00000578187 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
CCDC57-211ENST00000578187 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
CCDC57-211ENST00000578187 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
CCDC57-211ENST00000578187 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
CCDC57-211ENST00000578187 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
CCDC57-211ENST00000578187 AQRO60306 1485 aaKnown RBP eCLIP22.74■■□□□ 1.235e-6■■■□□ 16.9
CCDC57-211ENST00000578187 SOGA1O94964 1423 aa22.73■■□□□ 1.23
CCDC57-211ENST00000578187 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
CCDC57-211ENST00000578187 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
CCDC57-211ENST00000578187 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
CCDC57-211ENST00000578187 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
CCDC57-211ENST00000578187 CHD1O14646 1710 aa22.68■■□□□ 1.22
CCDC57-211ENST00000578187 RIMBP3CA6NJZ7 1639 aa22.67■■□□□ 1.22
CCDC57-211ENST00000578187 RIMBP3BA6NNM3 1639 aa22.67■■□□□ 1.22
CCDC57-211ENST00000578187 RIMBP3Q9UFD9 1639 aa22.67■■□□□ 1.22
CCDC57-211ENST00000578187 CUX1P39880 1505 aa22.66■■□□□ 1.22
CCDC57-211ENST00000578187 FBLN2P98095 1184 aa22.64■■□□□ 1.21
CCDC57-211ENST00000578187 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
CCDC57-211ENST00000578187 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
CCDC57-211ENST00000578187 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
CCDC57-211ENST00000578187 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
CCDC57-211ENST00000578187 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
CCDC57-211ENST00000578187 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
CCDC57-211ENST00000578187 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
CCDC57-211ENST00000578187 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
CCDC57-211ENST00000578187 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
CCDC57-211ENST00000578187 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
CCDC57-211ENST00000578187 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
CCDC57-211ENST00000578187 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
CCDC57-211ENST00000578187 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
CCDC57-211ENST00000578187 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
CCDC57-211ENST00000578187 CLASP1Q7Z460 1538 aa22.39■■□□□ 1.17
CCDC57-211ENST00000578187 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
CCDC57-211ENST00000578187 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
CCDC57-211ENST00000578187 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
CCDC57-211ENST00000578187 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
CCDC57-211ENST00000578187 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
CCDC57-211ENST00000578187 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
CCDC57-211ENST00000578187 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
CCDC57-211ENST00000578187 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
CCDC57-211ENST00000578187 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
CCDC57-211ENST00000578187 NUP160Q12769 1436 aa22.12■■□□□ 1.13
CCDC57-211ENST00000578187 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
CCDC57-211ENST00000578187 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
CCDC57-211ENST00000578187 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms