RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 NPM1P06748 294 aaKnown RBP eCLIP24.51■■□□□ 1.51
SREBF1-217ENST00000577897 DIP2BQ9P265 1576 aa24.5■■□□□ 1.51
SREBF1-217ENST00000577897 MAPKBP1O60336 1514 aa24.47■■□□□ 1.51
SREBF1-217ENST00000577897 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
SREBF1-217ENST00000577897 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.51
SREBF1-217ENST00000577897 TSPOAP1O95153 1857 aa24.41■■□□□ 1.5
SREBF1-217ENST00000577897 ADCY10Q96PN6 1610 aa24.4■■□□□ 1.5
SREBF1-217ENST00000577897 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
SREBF1-217ENST00000577897 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.49
SREBF1-217ENST00000577897 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
SREBF1-217ENST00000577897 ADGRL1O94910 1474 aa24.25■■□□□ 1.47
SREBF1-217ENST00000577897 HECW2Q9P2P5 1572 aa24.25■■□□□ 1.47
SREBF1-217ENST00000577897 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
SREBF1-217ENST00000577897 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
SREBF1-217ENST00000577897 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
SREBF1-217ENST00000577897 PPRC1Q5VV67 1664 aaKnown RBP24.11■■□□□ 1.45
SREBF1-217ENST00000577897 FBXO41Q8TF61 875 aa24.1■■□□□ 1.45
SREBF1-217ENST00000577897 PTPRGP23470 1445 aa24.09■■□□□ 1.45
SREBF1-217ENST00000577897 ASXL2Q76L83 1435 aa24.06■■□□□ 1.44
SREBF1-217ENST00000577897 ABCC2Q92887 1545 aa24.05■■□□□ 1.44
SREBF1-217ENST00000577897 GLI2P10070 1586 aa24.03■■□□□ 1.44
SREBF1-217ENST00000577897 PLB1Q6P1J6 1458 aa24.03■■□□□ 1.44
SREBF1-217ENST00000577897 CUL7Q14999 1698 aa24.01■■□□□ 1.43
SREBF1-217ENST00000577897 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
SREBF1-217ENST00000577897 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
SREBF1-217ENST00000577897 CARMIL2Q6F5E8 1435 aa23.96■■□□□ 1.43
SREBF1-217ENST00000577897 IGF1RP08069 1367 aa23.95■■□□□ 1.42
SREBF1-217ENST00000577897 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
SREBF1-217ENST00000577897 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
SREBF1-217ENST00000577897 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
SREBF1-217ENST00000577897 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
SREBF1-217ENST00000577897 UHRF1BP1LA0JNW5 1464 aa23.88■■□□□ 1.41
SREBF1-217ENST00000577897 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
SREBF1-217ENST00000577897 IQGAP2Q13576 1575 aa23.84■■□□□ 1.41
SREBF1-217ENST00000577897 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
SREBF1-217ENST00000577897 ZCCHC11Q5TAX3 1644 aaKnown RBP23.81■■□□□ 1.4
SREBF1-217ENST00000577897 KDM5BQ9UGL1 1544 aa23.8■■□□□ 1.4
SREBF1-217ENST00000577897 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
SREBF1-217ENST00000577897 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
SREBF1-217ENST00000577897 WDR7Q9Y4E6 1490 aa23.7■■□□□ 1.38
SREBF1-217ENST00000577897 KIF21BO75037 1637 aa23.69■■□□□ 1.38
SREBF1-217ENST00000577897 KIAA0556O60303 1618 aa23.65■■□□□ 1.38
SREBF1-217ENST00000577897 CD109Q6YHK3 1445 aa23.64■■□□□ 1.37
SREBF1-217ENST00000577897 UGGT2Q9NYU1 1516 aa23.63■■□□□ 1.37
SREBF1-217ENST00000577897 CFAP43Q8NDM7 1665 aa23.62■■□□□ 1.37
SREBF1-217ENST00000577897 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
SREBF1-217ENST00000577897 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
SREBF1-217ENST00000577897 SOCS7O14512 581 aa23.54■■□□□ 1.36
SREBF1-217ENST00000577897 PTPRMP28827 1452 aa23.53■■□□□ 1.36
SREBF1-217ENST00000577897 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
SREBF1-217ENST00000577897 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
SREBF1-217ENST00000577897 ILDR2Q71H61 639 aa23.47■■□□□ 1.35
SREBF1-217ENST00000577897 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
SREBF1-217ENST00000577897 ABCA8O94911 1581 aa23.44■■□□□ 1.34
SREBF1-217ENST00000577897 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
SREBF1-217ENST00000577897 DISP3Q9P2K9 1392 aa23.42■■□□□ 1.34
SREBF1-217ENST00000577897 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
SREBF1-217ENST00000577897 ARID3CA6NKF2 412 aa23.39■■□□□ 1.33
SREBF1-217ENST00000577897 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
SREBF1-217ENST00000577897 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
SREBF1-217ENST00000577897 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
SREBF1-217ENST00000577897 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
SREBF1-217ENST00000577897 CERKQ8TCT0 537 aa23.36■■□□□ 1.33
SREBF1-217ENST00000577897 RAPGEF3O95398 923 aa23.35■■□□□ 1.33
SREBF1-217ENST00000577897 RIMS1Q86UR5 1692 aaKnown RBP23.3■■□□□ 1.32
SREBF1-217ENST00000577897 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
SREBF1-217ENST00000577897 HSPA2P54652 639 aa23.29■■□□□ 1.32
SREBF1-217ENST00000577897 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
SREBF1-217ENST00000577897 PHLDB1Q86UU1 1377 aa23.28■■□□□ 1.32
SREBF1-217ENST00000577897 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
SREBF1-217ENST00000577897 ATP10BO94823 1461 aa23.24■■□□□ 1.31
SREBF1-217ENST00000577897 NEO1Q92859 1461 aa23.24■■□□□ 1.31
SREBF1-217ENST00000577897 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-217ENST00000577897 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
SREBF1-217ENST00000577897 ARHGEF40Q8TER5 1519 aa23.19■■□□□ 1.3
SREBF1-217ENST00000577897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-217ENST00000577897 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
SREBF1-217ENST00000577897 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
SREBF1-217ENST00000577897 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
SREBF1-217ENST00000577897 FANCAO15360 1455 aa23.1■■□□□ 1.29
SREBF1-217ENST00000577897 DENND4BO75064 1496 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-217ENST00000577897 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
SREBF1-217ENST00000577897 RICTORQ6R327 1708 aa23.09■■□□□ 1.29
SREBF1-217ENST00000577897 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.29
SREBF1-217ENST00000577897 MLECQ14165 292 aa23.07■■□□□ 1.28
SREBF1-217ENST00000577897 AKNAQ7Z591 1439 aa23.06■■□□□ 1.28
SREBF1-217ENST00000577897 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
SREBF1-217ENST00000577897 SIGLEC1Q9BZZ2 1709 aa23.05■■□□□ 1.28
SREBF1-217ENST00000577897 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
SREBF1-217ENST00000577897 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
SREBF1-217ENST00000577897 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
SREBF1-217ENST00000577897 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
SREBF1-217ENST00000577897 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
SREBF1-217ENST00000577897 EFCAB5A4FU69 1503 aa23■■□□□ 1.27
SREBF1-217ENST00000577897 TTC37Q6PGP7 1564 aa22.99■■□□□ 1.27
SREBF1-217ENST00000577897 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
SREBF1-217ENST00000577897 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
SREBF1-217ENST00000577897 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
SREBF1-217ENST00000577897 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
SREBF1-217ENST00000577897 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms