RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
RNF43-202ENST00000577625 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
RNF43-202ENST00000577625 ADAMTS12P58397 1594 aa21.31■■□□□ 1
RNF43-202ENST00000577625 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
RNF43-202ENST00000577625 GRIN2BQ13224 1484 aa21.3■■□□□ 1
RNF43-202ENST00000577625 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
RNF43-202ENST00000577625 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
RNF43-202ENST00000577625 TTBK1Q5TCY1 1321 aaPredicted RBP21.18■□□□□ 0.98
RNF43-202ENST00000577625 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
RNF43-202ENST00000577625 SAMD9Q5K651 1589 aa21.14■□□□□ 0.97
RNF43-202ENST00000577625 APLP2Q06481 763 aa21.13■□□□□ 0.97
RNF43-202ENST00000577625 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
RNF43-202ENST00000577625 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
RNF43-202ENST00000577625 IQGAP2Q13576 1575 aa21.08■□□□□ 0.97
RNF43-202ENST00000577625 PCF11O94913 1555 aaKnown RBP21.08■□□□□ 0.97
RNF43-202ENST00000577625 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
RNF43-202ENST00000577625 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
RNF43-202ENST00000577625 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
RNF43-202ENST00000577625 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
RNF43-202ENST00000577625 MAP3K1Q13233 1512 aa21.02■□□□□ 0.96
RNF43-202ENST00000577625 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
RNF43-202ENST00000577625 ZEB1P37275 1124 aaPredicted RBP21■□□□□ 0.95
RNF43-202ENST00000577625 FYCO1Q9BQS8 1478 aa20.99■□□□□ 0.95
RNF43-202ENST00000577625 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
RNF43-202ENST00000577625 FMN1Q68DA7 1419 aa20.98■□□□□ 0.95
RNF43-202ENST00000577625 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
RNF43-202ENST00000577625 CASKIN1Q8WXD9 1431 aa20.97■□□□□ 0.95
RNF43-202ENST00000577625 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
RNF43-202ENST00000577625 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
RNF43-202ENST00000577625 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
RNF43-202ENST00000577625 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
RNF43-202ENST00000577625 NUP160Q12769 1436 aa20.9■□□□□ 0.94
RNF43-202ENST00000577625 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.94
RNF43-202ENST00000577625 KIAA0556O60303 1618 aa20.88■□□□□ 0.93
RNF43-202ENST00000577625 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
RNF43-202ENST00000577625 FBLN2P98095 1184 aa20.85■□□□□ 0.93
RNF43-202ENST00000577625 CHD1O14646 1710 aa20.84■□□□□ 0.93
RNF43-202ENST00000577625 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
RNF43-202ENST00000577625 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
RNF43-202ENST00000577625 HECW1Q76N89 1606 aa20.79■□□□□ 0.92
RNF43-202ENST00000577625 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
RNF43-202ENST00000577625 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
RNF43-202ENST00000577625 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
RNF43-202ENST00000577625 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
RNF43-202ENST00000577625 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
RNF43-202ENST00000577625 RAPGEF6Q8TEU7 1601 aa20.7■□□□□ 0.9
RNF43-202ENST00000577625 EPRSP07814 1512 aaKnown RBP20.7■□□□□ 0.9
RNF43-202ENST00000577625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
RNF43-202ENST00000577625 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
RNF43-202ENST00000577625 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
RNF43-202ENST00000577625 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
RNF43-202ENST00000577625 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
RNF43-202ENST00000577625 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
RNF43-202ENST00000577625 CDK13Q14004 1512 aaKnown RBP20.66■□□□□ 0.9
RNF43-202ENST00000577625 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
RNF43-202ENST00000577625 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.89
RNF43-202ENST00000577625 NUP153P49790 1475 aaKnown RBP20.63■□□□□ 0.89
RNF43-202ENST00000577625 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
RNF43-202ENST00000577625 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
RNF43-202ENST00000577625 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
RNF43-202ENST00000577625 PLB1Q6P1J6 1458 aa20.59■□□□□ 0.89
RNF43-202ENST00000577625 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
RNF43-202ENST00000577625 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
RNF43-202ENST00000577625 ABCA8O94911 1581 aa20.56■□□□□ 0.88
RNF43-202ENST00000577625 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
RNF43-202ENST00000577625 CLASP1Q7Z460 1538 aa20.55■□□□□ 0.88
RNF43-202ENST00000577625 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
RNF43-202ENST00000577625 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
RNF43-202ENST00000577625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.88
RNF43-202ENST00000577625 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
RNF43-202ENST00000577625 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
RNF43-202ENST00000577625 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
RNF43-202ENST00000577625 ITGAEP38570 1179 aa20.47■□□□□ 0.87
RNF43-202ENST00000577625 PTPN23Q9H3S7 1636 aa20.46■□□□□ 0.87
RNF43-202ENST00000577625 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
RNF43-202ENST00000577625 PTPRGP23470 1445 aa20.45■□□□□ 0.86
RNF43-202ENST00000577625 ADCY10Q96PN6 1610 aa20.43■□□□□ 0.86
RNF43-202ENST00000577625 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
RNF43-202ENST00000577625 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
RNF43-202ENST00000577625 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
RNF43-202ENST00000577625 ATP10BO94823 1461 aa20.4■□□□□ 0.86
RNF43-202ENST00000577625 KIF14Q15058 1648 aa20.38■□□□□ 0.85
RNF43-202ENST00000577625 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
RNF43-202ENST00000577625 DHX57Q6P158 1386 aaKnown RBP20.36■□□□□ 0.85
RNF43-202ENST00000577625 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
RNF43-202ENST00000577625 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
RNF43-202ENST00000577625 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
RNF43-202ENST00000577625 ITSN2Q9NZM3 1697 aa20.34■□□□□ 0.85
RNF43-202ENST00000577625 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
RNF43-202ENST00000577625 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
RNF43-202ENST00000577625 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
RNF43-202ENST00000577625 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
RNF43-202ENST00000577625 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.83
RNF43-202ENST00000577625 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
RNF43-202ENST00000577625 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
RNF43-202ENST00000577625 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
RNF43-202ENST00000577625 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
RNF43-202ENST00000577625 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
RNF43-202ENST00000577625 GCC2Q8IWJ2 1684 aa20.24■□□□□ 0.83
RNF43-202ENST00000577625 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms