RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
TRAPPC1-207ENST00000575639 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
TRAPPC1-207ENST00000575639 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
TRAPPC1-207ENST00000575639 JPH4Q96JJ6 628 aa24.96■■□□□ 1.59
TRAPPC1-207ENST00000575639 EEA1Q15075 1411 aa24.95■■□□□ 1.59
TRAPPC1-207ENST00000575639 KIAA0586Q9BVV6 1533 aa24.92■■□□□ 1.58
TRAPPC1-207ENST00000575639 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
TRAPPC1-207ENST00000575639 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
TRAPPC1-207ENST00000575639 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC1-207ENST00000575639 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
TRAPPC1-207ENST00000575639 ERCC6L2Q5T890 1561 aa24.73■■□□□ 1.55
TRAPPC1-207ENST00000575639 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
TRAPPC1-207ENST00000575639 CARMIL2Q6F5E8 1435 aa24.7■■□□□ 1.55
TRAPPC1-207ENST00000575639 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
TRAPPC1-207ENST00000575639 PTPRGP23470 1445 aa24.61■■□□□ 1.53
TRAPPC1-207ENST00000575639 UGGT2Q9NYU1 1516 aa24.6■■□□□ 1.53
TRAPPC1-207ENST00000575639 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC1-207ENST00000575639 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
TRAPPC1-207ENST00000575639 EHMT2Q96KQ7 1210 aa24.56■■□□□ 1.52
TRAPPC1-207ENST00000575639 KIF21BO75037 1637 aa24.55■■□□□ 1.52
TRAPPC1-207ENST00000575639 GOLGA3Q08378 1498 aa24.55■■□□□ 1.52
TRAPPC1-207ENST00000575639 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
TRAPPC1-207ENST00000575639 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRAPPC1-207ENST00000575639 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
TRAPPC1-207ENST00000575639 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC1-207ENST00000575639 KIAA0556O60303 1618 aa24.44■■□□□ 1.5
TRAPPC1-207ENST00000575639 ILDR1Q86SU0 546 aaPredicted RBP24.44■■□□□ 1.5
TRAPPC1-207ENST00000575639 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
TRAPPC1-207ENST00000575639 UACAQ9BZF9 1416 aa24.4■■□□□ 1.5
TRAPPC1-207ENST00000575639 UHRF1BP1LA0JNW5 1464 aa24.34■■□□□ 1.49
TRAPPC1-207ENST00000575639 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
TRAPPC1-207ENST00000575639 ABCC2Q92887 1545 aa24.3■■□□□ 1.48
TRAPPC1-207ENST00000575639 SAMD9Q5K651 1589 aa24.28■■□□□ 1.48
TRAPPC1-207ENST00000575639 PLB1Q6P1J6 1458 aa24.27■■□□□ 1.48
TRAPPC1-207ENST00000575639 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
TRAPPC1-207ENST00000575639 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
TRAPPC1-207ENST00000575639 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
TRAPPC1-207ENST00000575639 KDM5BQ9UGL1 1544 aa24.2■■□□□ 1.47
TRAPPC1-207ENST00000575639 FAM69CQ0P6D2 419 aa24.2■■□□□ 1.46
TRAPPC1-207ENST00000575639 ABCA8O94911 1581 aa24.19■■□□□ 1.46
TRAPPC1-207ENST00000575639 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
TRAPPC1-207ENST00000575639 ABCC10Q5T3U5 1492 aa24.15■■□□□ 1.46
TRAPPC1-207ENST00000575639 ARHGAP35Q9NRY4 1499 aa24.15■■□□□ 1.46
TRAPPC1-207ENST00000575639 KDM4FA0A1W2PPD8 638 aa24.15■■□□□ 1.46
TRAPPC1-207ENST00000575639 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
TRAPPC1-207ENST00000575639 FMN1Q68DA7 1419 aa24.12■■□□□ 1.45
TRAPPC1-207ENST00000575639 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
TRAPPC1-207ENST00000575639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC1-207ENST00000575639 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
TRAPPC1-207ENST00000575639 CLIP1P30622 1438 aa24.1■■□□□ 1.45
TRAPPC1-207ENST00000575639 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
TRAPPC1-207ENST00000575639 ATP10BO94823 1461 aa24.07■■□□□ 1.44
TRAPPC1-207ENST00000575639 ATP1B4Q9UN42 357 aaPredicted RBP24.07■■□□□ 1.44
TRAPPC1-207ENST00000575639 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
TRAPPC1-207ENST00000575639 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
TRAPPC1-207ENST00000575639 NUP153P49790 1475 aaKnown RBP24.03■■□□□ 1.44
TRAPPC1-207ENST00000575639 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
TRAPPC1-207ENST00000575639 KCNH8Q96L42 1107 aa24.03■■□□□ 1.44
TRAPPC1-207ENST00000575639 DIP2BQ9P265 1576 aa24■■□□□ 1.43
TRAPPC1-207ENST00000575639 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
TRAPPC1-207ENST00000575639 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
TRAPPC1-207ENST00000575639 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
TRAPPC1-207ENST00000575639 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC1-207ENST00000575639 GLI2P10070 1586 aa23.94■■□□□ 1.42
TRAPPC1-207ENST00000575639 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
TRAPPC1-207ENST00000575639 HECW1Q76N89 1606 aa23.88■■□□□ 1.41
TRAPPC1-207ENST00000575639 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
TRAPPC1-207ENST00000575639 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
TRAPPC1-207ENST00000575639 FYCO1Q9BQS8 1478 aa23.82■■□□□ 1.4
TRAPPC1-207ENST00000575639 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
TRAPPC1-207ENST00000575639 KDM6BO15054 1643 aa23.81■■□□□ 1.4
TRAPPC1-207ENST00000575639 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
TRAPPC1-207ENST00000575639 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
TRAPPC1-207ENST00000575639 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
TRAPPC1-207ENST00000575639 MAP3K4Q9Y6R4 1608 aa23.75■■□□□ 1.39
TRAPPC1-207ENST00000575639 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC1-207ENST00000575639 TSPOAP1O95153 1857 aa23.71■■□□□ 1.39
TRAPPC1-207ENST00000575639 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.39
TRAPPC1-207ENST00000575639 ABCA9Q8IUA7 1624 aa23.7■■□□□ 1.38
TRAPPC1-207ENST00000575639 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
TRAPPC1-207ENST00000575639 PHLDB1Q86UU1 1377 aa23.68■■□□□ 1.38
TRAPPC1-207ENST00000575639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.64■■□□□ 1.38
TRAPPC1-207ENST00000575639 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.38
TRAPPC1-207ENST00000575639 ADGRL1O94910 1474 aa23.63■■□□□ 1.37
TRAPPC1-207ENST00000575639 HECW2Q9P2P5 1572 aa23.63■■□□□ 1.37
TRAPPC1-207ENST00000575639 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
TRAPPC1-207ENST00000575639 NEO1Q92859 1461 aa23.61■■□□□ 1.37
TRAPPC1-207ENST00000575639 PLCH2O75038 1416 aa23.6■■□□□ 1.37
TRAPPC1-207ENST00000575639 EFCAB2Q5VUJ9 269 aa23.6■■□□□ 1.37
TRAPPC1-207ENST00000575639 APLP2Q06481 763 aa23.59■■□□□ 1.37
TRAPPC1-207ENST00000575639 KIF14Q15058 1648 aa23.59■■□□□ 1.37
TRAPPC1-207ENST00000575639 COL17A1Q9UMD9 1497 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC1-207ENST00000575639 FANCAO15360 1455 aa23.56■■□□□ 1.36
TRAPPC1-207ENST00000575639 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
TRAPPC1-207ENST00000575639 TTC37Q6PGP7 1564 aa23.56■■□□□ 1.36
TRAPPC1-207ENST00000575639 ARAP3Q8WWN8 1544 aa23.54■■□□□ 1.36
TRAPPC1-207ENST00000575639 AKNAQ7Z591 1439 aa23.54■■□□□ 1.36
TRAPPC1-207ENST00000575639 FBXO41Q8TF61 875 aa23.52■■□□□ 1.36
TRAPPC1-207ENST00000575639 RAPGEF3O95398 923 aa23.5■■□□□ 1.35
TRAPPC1-207ENST00000575639 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms